RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 RPS6KA5O75582 802 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 TDRD12Q587J7 1177 aaKnown RBP13.04□□□□□ -0.32
SMPD4-209ENST00000439886 C8orf74Q6P047 294 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 MAGEB6Q8N7X4 407 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 SRPRBQ9Y5M8 271 aaKnown RBP13.04□□□□□ -0.32
SMPD4-209ENST00000439886 DIP2CQ9Y2E4 1556 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 JCADQ9P266 1359 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 EIF3HO15372 352 aaKnown RBP eCLIP13.04□□□□□ -0.324e-7■□□□□ 8.8
SMPD4-209ENST00000439886 PRKAB2O43741 272 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 USO1O60763 962 aaKnown RBP13.04□□□□□ -0.32
SMPD4-209ENST00000439886 MOCS3O95396 460 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 ARID5AQ03989 594 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 SPAG1Q07617 926 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 NAA25Q14CX7 972 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 MFSD4BQ5TF39 518 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 FAM210AQ96ND0 272 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 MMRN2Q9H8L6 949 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 MLXIPQ9HAP2 919 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 AGPAT5Q9NUQ2 364 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 ETAA1Q9NY74 926 aa13.04□□□□□ -0.32
SMPD4-209ENST00000439886 TACC1O75410 805 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 STAT6P42226 847 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 KLK7P49862 253 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 PTGDRQ13258 359 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 CHRNA2Q15822 529 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 WDR93Q6P2C0 686 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 MICALCLQ6ZW33 695 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 SYNE4Q8N205 404 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 ABCF2Q9UG63 623 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 FAM184BQ9ULE4 1060 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 NCAPD2Q15021 1401 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 AP1G2O75843 785 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 PRPF6O94906 941 aaKnown RBP13.03□□□□□ -0.32
SMPD4-209ENST00000439886 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
SMPD4-209ENST00000439886 GCKP35557 465 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 VAV2P52735 878 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 NLRP5P59047 1200 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 FOXO4P98177 505 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 TCP11X2Q5H9J9 407 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 CEP85LQ5SZL2 805 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 NFRKBQ6P4R8 1299 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 CCDC121Q6ZUS5 278 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 PLBD2Q8NHP8 589 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 TMEM87BQ96K49 555 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-209ENST00000439886 G3BP2Q9UN86 482 aaKnown RBP13.03□□□□□ -0.32
SMPD4-209ENST00000439886 TNRQ92752 1358 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 SF3B2Q13435 895 aaKnown RBP13.03□□□□□ -0.32
SMPD4-209ENST00000439886 CCDC178Q5BJE1 867 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 PROCA1Q8NCQ7 364 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-209ENST00000439886 EHBP1Q8NDI1 1231 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 SPATS2LQ9NUQ6 558 aaKnown RBP13.03□□□□□ -0.32
SMPD4-209ENST00000439886 MYO1AQ9UBC5 1043 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
SMPD4-209ENST00000439886 DEXIO95424 95 aa13.02□□□□□ -0.32
SMPD4-209ENST00000439886 GBP2P32456 591 aaPredicted RBP13.02□□□□□ -0.32
SMPD4-209ENST00000439886 TRAPPC11Q7Z392 1133 aa13.02□□□□□ -0.32
SMPD4-209ENST00000439886 TBC1D31Q96DN5 1066 aa13.02□□□□□ -0.32
SMPD4-209ENST00000439886 LY9Q9HBG7 655 aa13.02□□□□□ -0.32
SMPD4-209ENST00000439886 NFU1Q9UMS0 254 aa13.02□□□□□ -0.32
SMPD4-209ENST00000439886 PPP1R3GB7ZBB8 358 aa13.02□□□□□ -0.33
SMPD4-209ENST00000439886 FMNL1O95466 1100 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-209ENST00000439886 KRT2P35908 639 aa13.02□□□□□ -0.33
SMPD4-209ENST00000439886 GUCY2DQ02846 1103 aa13.02□□□□□ -0.33
SMPD4-209ENST00000439886 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.33
SMPD4-209ENST00000439886 KLHL7Q8IXQ5 586 aa13.02□□□□□ -0.33
SMPD4-209ENST00000439886 GOPCQ9HD26 462 aa13.02□□□□□ -0.33
SMPD4-209ENST00000439886 ODF2LQ9ULJ1 636 aa13.02□□□□□ -0.33
SMPD4-209ENST00000439886 ELF1P32519 619 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 CLNS1AP54105 237 aaKnown RBP13.01□□□□□ -0.33
SMPD4-209ENST00000439886 VIPAS39Q9H9C1 493 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 NHEJ1Q9H9Q4 299 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-209ENST00000439886 TMEM2Q9UHN6 1383 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 C3P01024 1663 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 GOLGA8KD6RF30 607 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 AGPSO00116 658 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 FOXP2O15409 715 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 MCAMP43121 646 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 SARSP49591 514 aaKnown RBP13.01□□□□□ -0.33
SMPD4-209ENST00000439886 C11orf91Q3C1V1 193 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 RABL6Q3YEC7 729 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-209ENST00000439886 TTC38Q5R3I4 469 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 PIH1D3Q9NQM4 214 aaKnown RBP13.01□□□□□ -0.33
SMPD4-209ENST00000439886 REXO2Q9Y3B8 237 aaKnown RBP13.01□□□□□ -0.33
SMPD4-209ENST00000439886 ANKARQ7Z5J8 1434 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 ECEL1O95672 775 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 PRCPP42785 496 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 KCNV1Q6PIU1 500 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 PROSER2Q86WR7 435 aaPredicted RBP13.01□□□□□ -0.33
SMPD4-209ENST00000439886 MS4A14Q96JA4 679 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 GSDMAQ96QA5 445 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 IFIH1Q9BYX4 1025 aaKnown RBP13.01□□□□□ -0.33
SMPD4-209ENST00000439886 NACAP1Q9BZK3 213 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 EPB41L5Q9HCM4 733 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 LRP2BPQ9P2M1 347 aa13.01□□□□□ -0.33
SMPD4-209ENST00000439886 RICTORQ6R327 1708 aa13□□□□□ -0.33
SMPD4-209ENST00000439886 RCCD1A6NED2 376 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms