RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 CPVLQ9H3G5 476 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 SERTAD1Q9UHV2 236 aa13.43□□□□□ -0.26
SMAD3-202ENST00000439724 ARFGEF1Q9Y6D6 1849 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 COL4A5P29400 1685 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 FRMPD2Q68DX3 1309 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-202ENST00000439724 IKBKBO14920 756 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 MCM7P33993 719 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 SOGA3Q5TF21 947 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 RSBN1LQ6PCB5 846 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-202ENST00000439724 C4orf32Q8N8J7 132 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 RASGRP4Q8TDF6 673 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 SYMPKQ92797 1274 aaKnown RBP13.42□□□□□ -0.26
SMAD3-202ENST00000439724 MRFAP1L1Q96HT8 127 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 PYM1Q9BRP8 204 aaKnown RBP13.42□□□□□ -0.26
SMAD3-202ENST00000439724 NYAP2Q9P242 653 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 PCDHA5Q9Y5H7 936 aa13.42□□□□□ -0.26
SMAD3-202ENST00000439724 VWA3AA6NCI4 1184 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 SMTNL1A8MU46 457 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 MPHOSPH10O00566 681 aaKnown RBP13.41□□□□□ -0.26
SMAD3-202ENST00000439724 VIL1P09327 827 aaKnown RBP13.41□□□□□ -0.26
SMAD3-202ENST00000439724 SARSP49591 514 aaKnown RBP13.41□□□□□ -0.26
SMAD3-202ENST00000439724 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
SMAD3-202ENST00000439724 PPP1R18Q6NYC8 613 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 HOMER1Q86YM7 354 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 TRIML1Q8N9V2 468 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 MKL1Q969V6 931 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 EPSTI1Q96J88 318 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 GMLQ99445 158 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 UBA5Q9GZZ9 404 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 TDRD3Q9H7E2 651 aaKnown RBP13.41□□□□□ -0.26
SMAD3-202ENST00000439724 KANSL2Q9H9L4 492 aa13.41□□□□□ -0.26
SMAD3-202ENST00000439724 BRCA1P38398 1863 aaKnown RBP13.41□□□□□ -0.26
SMAD3-202ENST00000439724 A0A087X0B3 334 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 SMCO2A6NFE2 343 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 LAD1O00515 517 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 FOXN1O15353 648 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 SLFN14P0C7P3 912 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 LONP1P36776 959 aaKnown RBP13.4□□□□□ -0.26
SMAD3-202ENST00000439724 TPM4P67936 248 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 ORC2Q13416 577 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-202ENST00000439724 NCAPHQ15003 741 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 CERKLQ49MI3 558 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-202ENST00000439724 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 ZSCAN29Q8IWY8 852 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-202ENST00000439724 LARGE2Q8N3Y3 721 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 PDILTQ8N807 584 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 SPATA20Q8TB22 786 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-202ENST00000439724 TRIM34Q9BYJ4 488 aa13.4□□□□□ -0.26
SMAD3-202ENST00000439724 PNMA6FA0A0J9YX94 578 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 PRPHP41219 470 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 TGFB2P61812 414 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 NONOQ15233 471 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMAD3-202ENST00000439724 IL17AQ16552 155 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 INF2Q27J81 1249 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 TMEM179Q6ZVK1 233 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 SPC24Q8NBT2 197 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 DCAF4Q8WV16 495 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 SMARCE1Q969G3 411 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 DHX58Q96C10 678 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 MTMR8Q96EF0 704 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 VAT1LQ9HCJ6 419 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 GPCPD1Q9NPB8 672 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 TMOD2Q9NZR1 351 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 MAN1B1Q9UKM7 699 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 HDAC9Q9UKV0 1011 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 FER1L6Q2WGJ9 1857 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 FAM196BA6NMK8 535 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 PSMD14O00487 310 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 SMC2O95347 1197 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 SLURP2P0DP57 97 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 MORC3Q14149 939 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 E2F4Q16254 413 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
SMAD3-202ENST00000439724 REXO1Q8N1G1 1221 aaKnown RBP13.39□□□□□ -0.27
SMAD3-202ENST00000439724 ZNF277Q9NRM2 450 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-202ENST00000439724 MYO1BO43795 1136 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 RAD17O75943 681 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 EEF2P13639 858 aaKnown RBP13.38□□□□□ -0.27
SMAD3-202ENST00000439724 BMP6P22004 513 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 ADCY7P51828 1080 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 ATP2B2Q01814 1243 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 MYL5Q02045 173 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 ISM2Q6H9L7 571 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 NEK8Q86SG6 692 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 NIM1KQ8IY84 436 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 ADGRF4Q8IZF3 695 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 MLKLQ8NB16 471 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 PAGE5Q96GU1 130 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-202ENST00000439724 PIM2Q9P1W9 311 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 DACH1Q9UI36 760 aa13.38□□□□□ -0.27
SMAD3-202ENST00000439724 HERC5Q9UII4 1024 aaKnown RBP13.38□□□□□ -0.27
SMAD3-202ENST00000439724 ZNRF3Q9ULT6 936 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms