RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 PSMD14O00487 310 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 NDUFA10O95299 355 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 TROAPQ12815 778 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 NELFBQ8WX92 580 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 VIPAS39Q9H9C1 493 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 RMND1Q9NWS8 449 aa17.19■□□□□ 0.34
CDC42EP4-202ENST00000439510 hCG_1642624A0A1W2PR95 340 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 MINDY4BA8MYZ0 360 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 ONECUT3O60422 494 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 COBLO75128 1261 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 CALM1P0DP23 149 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 CALM2P0DP24 149 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 CALM3P0DP25 149 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 TRAPPC10P48553 1259 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 SMIM5Q71RC9 77 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 ADGRA1Q86SQ6 560 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 ACBD3Q9H3P7 528 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 LRP2BPQ9P2M1 347 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 LCMT1Q9UIC8 334 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 IQSEC3Q9UPP2 1182 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 EPN1Q9Y6I3 576 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 RREB1Q92766 1687 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 IFIT1BQ5T764 474 aaKnown RBP17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 NCAPH2Q6IBW4 605 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 TMTC3Q6ZXV5 915 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 FBXO41Q8TF61 875 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 SDR42E1Q8WUS8 393 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 RASSF4Q9H2L5 321 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 CACNA1SQ13698 1873 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 SBF2Q86WG5 1849 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 LRRIQ3A6PVS8 624 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 HSP90B2PQ58FF3 399 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 DNAJC7Q99615 494 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 CHP1Q99653 195 aa17.18■□□□□ 0.34
CDC42EP4-202ENST00000439510 MYH14Q7Z406 1995 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 CNTNAP5Q8WYK1 1306 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 DDAH1O94760 285 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 FGRP09769 529 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 CYP7A1P22680 504 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 AARSP49588 968 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 IL17AQ16552 155 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 CCDC148Q8NFR7 591 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 HAUS4Q9H6D7 363 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 H7C1D1 291 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 SMIM22K7EJ46 135 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 RPN1P04843 607 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 ZNF662Q6ZS27 426 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 DZIP3Q86Y13 1208 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 IRF2BP1Q8IU81 584 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 RRP15Q9Y3B9 282 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 LAMB2P55268 1798 aa17.17■□□□□ 0.34
CDC42EP4-202ENST00000439510 MAGEB6P1A0A0J9YX57 407 aa17.16■□□□□ 0.34
CDC42EP4-202ENST00000439510 USP14P54578 494 aa17.16■□□□□ 0.34
CDC42EP4-202ENST00000439510 UBXN1Q04323 297 aa17.16■□□□□ 0.34
CDC42EP4-202ENST00000439510 ZNF772Q68DY9 489 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP4-202ENST00000439510 OR8K1Q8NGG5 319 aa17.16■□□□□ 0.34
CDC42EP4-202ENST00000439510 A0A1W2PQC6 194 aa17.16■□□□□ 0.34
CDC42EP4-202ENST00000439510 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
CDC42EP4-202ENST00000439510 IL6STP40189 918 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP4-202ENST00000439510 CCDC102AQ96A19 550 aa17.16■□□□□ 0.34
CDC42EP4-202ENST00000439510 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 TTC26A0AVF1 554 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 MCM3P25205 808 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 PRCPP42785 496 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 KRT27Q7Z3Y8 459 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 IQCA1Q86XH1 822 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 RIOK1Q9BRS2 568 aaKnown RBP17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 TRIM34Q9BYJ4 488 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 TRIM10Q9UDY6 481 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 GUCA1BQ9UMX6 200 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 LGALS16A8MUM7 142 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 PAPD7Q5XG87 772 aaKnown RBP17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 ARL6IP4Q66PJ3 421 aaKnown RBP17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 MB21D1Q8N884 522 aa17.15■□□□□ 0.34
CDC42EP4-202ENST00000439510 PARP1P09874 1014 aaKnown RBP17.14■□□□□ 0.34
CDC42EP4-202ENST00000439510 CRKLP46109 303 aaKnown RBP17.14■□□□□ 0.34
CDC42EP4-202ENST00000439510 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.34
CDC42EP4-202ENST00000439510 ZNF507Q8TCN5 953 aa17.14■□□□□ 0.34
CDC42EP4-202ENST00000439510 BRIP1Q9BX63 1249 aa17.14■□□□□ 0.34
CDC42EP4-202ENST00000439510 RGS17Q9UGC6 210 aaPredicted RBP17.14■□□□□ 0.34
CDC42EP4-202ENST00000439510 MKRN1Q9UHC7 482 aaKnown RBP17.14■□□□□ 0.34
CDC42EP4-202ENST00000439510 CAPN11Q9UMQ6 739 aa17.14■□□□□ 0.34
CDC42EP4-202ENST00000439510 TARSL2A2RTX5 802 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 TRIM66O15016 1216 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 TRIM37O94972 964 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 LONP1P36776 959 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 HERVK_113P62684 666 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 ADSSL1Q8N142 457 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 SRBD1Q8N5C6 995 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 RPGRIP1Q96KN7 1286 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 GDAQ9Y2T3 454 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 ZNF804BA4D1E1 1349 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 PDS5AQ29RF7 1337 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 EEF1GP26641 437 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 WDR59Q6PJI9 974 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 PIK3AP1Q6ZUJ8 805 aa17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 LUC7L2Q9Y383 392 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-202ENST00000439510 SAR1BQ9Y6B6 198 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms