RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 SPPL2CQ8IUH8 684 aa5.46□□□□□ -1.54
VPS41-207ENST00000439468 PMFBP1Q8TBY8 1022 aa5.46□□□□□ -1.54
VPS41-207ENST00000439468 CPLX3Q8WVH0 158 aa5.46□□□□□ -1.54
VPS41-207ENST00000439468 ANAPC16Q96DE5 110 aa5.46□□□□□ -1.54
VPS41-207ENST00000439468 DSCC1Q9BVC3 393 aa5.46□□□□□ -1.54
VPS41-207ENST00000439468 EPB41L4BQ9H329 900 aa5.46□□□□□ -1.54
VPS41-207ENST00000439468 ZNF408Q9H9D4 720 aa5.46□□□□□ -1.54
VPS41-207ENST00000439468 DCP1AQ9NPI6 582 aaPredicted RBP5.46□□□□□ -1.54
VPS41-207ENST00000439468 CHST7Q9NS84 486 aa5.46□□□□□ -1.54
VPS41-207ENST00000439468 MINPP1Q9UNW1 487 aa5.46□□□□□ -1.54
VPS41-207ENST00000439468 USP2O75604 605 aaPredicted RBP5.45□□□□□ -1.54
VPS41-207ENST00000439468 CHRNEQ04844 493 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 SLC14A2Q15849 920 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 RUFY4Q6ZNE9 571 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 SYDE1Q6ZW31 735 aaPredicted RBP5.45□□□□□ -1.54
VPS41-207ENST00000439468 LILRA2Q8N149 483 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 USHBP1Q8N6Y0 703 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 FAM169BQ8N8A8 192 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 ANKS4BQ8N8V4 417 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 UBXN4Q92575 508 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 TM9SF2Q99805 663 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 SRRTQ9BXP5 876 aaKnown RBP5.45□□□□□ -1.54
VPS41-207ENST00000439468 KRTAP4-7Q9BYR0 210 aa5.45□□□□□ -1.54
VPS41-207ENST00000439468 SUCOQ9UBS9 1254 aaKnown RBP5.45□□□□□ -1.54
VPS41-207ENST00000439468 TP53P04637 393 aaPredicted RBP5.44□□□□□ -1.54
VPS41-207ENST00000439468 ACRP10323 421 aa5.44□□□□□ -1.54
VPS41-207ENST00000439468 GUCY2CP25092 1073 aa5.44□□□□□ -1.54
VPS41-207ENST00000439468 PDE6BP35913 854 aa5.44□□□□□ -1.54
VPS41-207ENST00000439468 AUHQ13825 339 aaKnown RBP5.44□□□□□ -1.54
VPS41-207ENST00000439468 TIGD5Q53EQ6 642 aa5.44□□□□□ -1.54
VPS41-207ENST00000439468 LSRQ86X29 649 aaPredicted RBP5.44□□□□□ -1.54
VPS41-207ENST00000439468 SIRT2Q8IXJ6 389 aa5.44□□□□□ -1.54
VPS41-207ENST00000439468 FBXO15Q8NCQ5 510 aaPredicted RBP5.44□□□□□ -1.54
VPS41-207ENST00000439468 SHDQ96IW2 340 aa5.44□□□□□ -1.54
VPS41-207ENST00000439468 PPP1R16BQ96T49 567 aa5.44□□□□□ -1.54
VPS41-207ENST00000439468 CDADC1Q9BWV3 514 aa5.44□□□□□ -1.54
VPS41-207ENST00000439468 SLC6A17Q9H1V8 727 aa5.44□□□□□ -1.54
VPS41-207ENST00000439468 C9IYK1 514 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 STK10O94804 968 aaKnown RBP5.43□□□□□ -1.54
VPS41-207ENST00000439468 GALK1P51570 392 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 PMS1P54277 932 aaKnown RBP5.43□□□□□ -1.54
VPS41-207ENST00000439468 EIF6P56537 245 aaKnown RBP5.43□□□□□ -1.54
VPS41-207ENST00000439468 RBL2Q08999 1139 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 MESP2Q0VG99 397 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 COL9A2Q14055 689 aaPredicted RBP5.43□□□□□ -1.54
VPS41-207ENST00000439468 NOL9Q5SY16 702 aaKnown RBP5.43□□□□□ -1.54
VPS41-207ENST00000439468 INTS3Q68E01 1043 aaKnown RBP5.43□□□□□ -1.54
VPS41-207ENST00000439468 CRTC3Q6UUV7 619 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 ZPBP2Q6X784 338 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 CEP128Q6ZU80 1094 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 LINC00116Q8NCU8 138 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 SPATA32Q96LK8 384 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 LNPKQ9C0E8 428 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 KCNK12Q9HB15 430 aa5.43□□□□□ -1.54
VPS41-207ENST00000439468 CWC22Q9HCG8 908 aaKnown RBP5.43□□□□□ -1.54
VPS41-207ENST00000439468 SMAD7O15105 426 aaKnown RBP5.42□□□□□ -1.54
VPS41-207ENST00000439468 RAP1GAPP47736 663 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 ZYXQ15942 572 aaKnown RBP5.42□□□□□ -1.54
VPS41-207ENST00000439468 BBS9Q3SYG4 887 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 DCAF15Q66K64 600 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 CWF19L1Q69YN2 538 aaKnown RBP5.42□□□□□ -1.54
VPS41-207ENST00000439468 UNC5AQ6ZN44 842 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 ANKS3Q6ZW76 656 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 DPH6Q7L8W6 267 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 ZNF605Q86T29 641 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 PPFIBP1Q86W92 1011 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 C7orf61Q8IZ16 206 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 TAB3Q8N5C8 712 aaPredicted RBP5.42□□□□□ -1.54
VPS41-207ENST00000439468 HNRNPLLQ8WVV9 542 aaKnown RBP5.42□□□□□ -1.54
VPS41-207ENST00000439468 SMARCC1Q92922 1105 aaPredicted RBP5.42□□□□□ -1.54
VPS41-207ENST00000439468 MAP6Q96JE9 813 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 EBF1Q9UH73 591 aa5.42□□□□□ -1.54
VPS41-207ENST00000439468 TMEM82A0PJX8 343 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 NFIBO00712 420 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 PSPNO60542 156 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 TMEM253P0C7T8 217 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 GIPRP48546 466 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 NR0B2Q15466 257 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 PPP2R5EQ16537 467 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 NAT16Q8N8M0 369 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 RBBP8NLQ8NC74 664 aaPredicted RBP5.41□□□□□ -1.54
VPS41-207ENST00000439468 LINC01599Q8WXQ3 324 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 BRF1Q92994 677 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 INTS4Q96HW7 963 aaKnown RBP5.41□□□□□ -1.54
VPS41-207ENST00000439468 SP110Q9HB58 689 aa5.41□□□□□ -1.54
VPS41-207ENST00000439468 DBX1A6NMT0 343 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 GSNP06396 782 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 ENDOUP21128 410 aaKnown RBP5.4□□□□□ -1.54
VPS41-207ENST00000439468 CTSKP43235 329 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 KIR2DL1P43626 348 aaPredicted RBP5.4□□□□□ -1.54
VPS41-207ENST00000439468 KIR2DL2P43627 348 aaPredicted RBP5.4□□□□□ -1.54
VPS41-207ENST00000439468 RTP1P59025 263 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 JAG1P78504 1218 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 FZD5Q13467 585 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 SNX17Q15036 470 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 GNPTABQ3T906 1256 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 AXDND1Q5T1B0 1012 aaPredicted RBP5.4□□□□□ -1.54
VPS41-207ENST00000439468 ADGRF1Q5T601 910 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
VPS41-207ENST00000439468 TMEM132EQ6IEE7 984 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms