RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 LMTK3Q96Q04 1460 aa11.15□□□□□ -0.62
CDC42SE1-202ENST00000439374 GOLGA6CA6NDK9 693 aa11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 ERLIN2O94905 339 aa11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 IVLP07476 585 aa11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 GOLGA6DP0CG33 693 aa11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 LIFRP42702 1097 aa11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 BEND6Q5SZJ8 279 aaPredicted RBP11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 SECISBP2LQ93073 1101 aaKnown RBP11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 ACBD3Q9H3P7 528 aa11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 GOLGA6AQ9NYA3 693 aa11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 ADAMTSL3P82987 1691 aa11.15□□□□□ -0.63
CDC42SE1-202ENST00000439374 RNF225M0QZC1 329 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 MPHOSPH10O00566 681 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 UBA7P41226 1012 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 STIM1Q13586 685 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 LETM2Q2VYF4 491 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 MMS19Q96T76 1030 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 UBA5Q9GZZ9 404 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 DACH1Q9UI36 760 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 RIC1Q4ADV7 1423 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 MYO1BO43795 1136 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 PPP6R2O75170 966 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 INF2Q27J81 1249 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 CCDC178Q5BJE1 867 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 TPTE2Q6XPS3 522 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 CEP112Q8N8E3 955 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 RRP36Q96EU6 259 aaKnown RBP11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 CCNL1Q9UK58 526 aaPredicted RBP11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 MYO1FO00160 1098 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 EBAG9O00559 213 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 STX10O60499 249 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 IDEP14735 1019 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 FGFR2P21802 821 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 STAT6P42226 847 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 E2F5Q15329 346 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 CCDC96Q2M329 555 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 CCDC181Q5TID7 509 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 TICAM2Q86XR7 235 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 STAG2Q8N3U4 1231 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 KIFC2Q96AC6 838 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 SCLT1Q96NL6 688 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 MAP3K14Q99558 947 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 MYO6Q9UM54 1294 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 JCADQ9P266 1359 aa11.14□□□□□ -0.63
CDC42SE1-202ENST00000439374 NDUFAB1O14561 156 aa11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 ATP1A1P05023 1023 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 KRT26Q7Z3Y9 468 aa11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 ANKRD20A12PQ8NF67 263 aa11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 KIAA0754O94854 1291 aa11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 NTSR2O95665 410 aa11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 LDHBP07195 334 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 MYBL2P10244 700 aa11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 TRIM21P19474 475 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 TRMT1LQ7Z2T5 733 aaKnown RBP11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 SGMS1Q86VZ5 419 aa11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 GDAQ9Y2T3 454 aa11.13□□□□□ -0.63
CDC42SE1-202ENST00000439374 SMIM23A6NLE4 172 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 PTPREP23469 700 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 SRBD1Q8N5C6 995 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 LINC00116Q8NCU8 138 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 FAM76AQ8TAV0 307 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 STAG1Q8WVM7 1258 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 FBXO2Q9UK22 296 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 RTCBQ9Y3I0 505 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 C5P01031 1676 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 LMO7Q8WWI1 1683 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 NOP2P46087 812 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 KLK7P49862 253 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 BRD3Q15059 726 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 TMEM139Q8IV31 216 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 HDAC7Q8WUI4 952 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 GOLGA6BA6NDN3 693 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 APBA1Q02410 837 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 IKQ13123 557 aaPredicted RBP11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 RSRC2Q7L4I2 434 aaKnown RBP11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 CLEC10AQ8IUN9 316 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 SLC24A3Q9HC58 644 aa11.12□□□□□ -0.63
CDC42SE1-202ENST00000439374 A0A087X0B3 334 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 SHTN1A0MZ66 631 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 IKBKBO14920 756 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 ADAMTS3O15072 1205 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 NCK2O43639 380 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 BUB1O43683 1085 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 RPSAP08865 295 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 RBM5P52756 815 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 NAPAP54920 295 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 CT47A1Q5JQC4 288 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 MAATS1Q7Z4T9 603 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 PNMA1Q8ND90 353 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 RPGRQ92834 1020 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 TANGO6Q9C0B7 1094 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 PPANQ9NQ55 473 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 MARF1Q9Y4F3 1742 aaKnown RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 FRMPD2Q68DX3 1309 aaPredicted RBP11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 MAGEA9P43362 315 aa11.11□□□□□ -0.63
CDC42SE1-202ENST00000439374 CUL4BQ13620 913 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms