RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ADGRL3Q9HAR2 1447 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 NR1I2O75469 434 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 SLC1A4P43007 532 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 TFAP4Q01664 338 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 TCP10Q12799 353 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 MIER3Q7Z3K6 550 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 TEKT1Q969V4 418 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 Q9H521 79 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 MTMR6Q9Y217 621 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 CIAO1O76071 339 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 FAM13AO94988 1023 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 RPSAP08865 295 aaKnown RBP16.53■□□□□ 0.24
TSC2-206ENST00000439117 PIGBQ92521 554 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 MYL10Q9BUA6 226 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 GPR108Q9NPR9 543 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
TSC2-206ENST00000439117 ABCA9Q8IUA7 1624 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 USP17L21D6R901 530 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 I3L4J1 428 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 SEC31AO94979 1220 aaKnown RBP16.53■□□□□ 0.24
TSC2-206ENST00000439117 CCDC197Q8NCU1 140 aa16.53■□□□□ 0.24
TSC2-206ENST00000439117 TRIM37O94972 964 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 KRT15P19012 456 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 GUCY2FP51841 1108 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 COG7P83436 770 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 PPARAQ07869 468 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 UAP1Q16222 522 aaPredicted RBP16.52■□□□□ 0.24
TSC2-206ENST00000439117 PEX26Q7Z412 305 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 C2CD5Q86YS7 1000 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 N4BP2L2Q92802 583 aaPredicted RBP16.52■□□□□ 0.24
TSC2-206ENST00000439117 ALKQ9UM73 1620 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 OPHN1O60890 802 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 PNMA6AP0CW24 399 aaPredicted RBP16.52■□□□□ 0.24
TSC2-206ENST00000439117 SLMAPQ14BN4 828 aa16.52■□□□□ 0.24
TSC2-206ENST00000439117 EVI5O60447 810 aa16.52■□□□□ 0.23
TSC2-206ENST00000439117 DBN1Q16643 649 aa16.52■□□□□ 0.23
TSC2-206ENST00000439117 TRIML1Q8N9V2 468 aa16.52■□□□□ 0.23
TSC2-206ENST00000439117 LZTS2Q9BRK4 669 aa16.52■□□□□ 0.23
TSC2-206ENST00000439117 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.23
TSC2-206ENST00000439117 FAF1Q9UNN5 650 aaPredicted RBP16.52■□□□□ 0.23
TSC2-206ENST00000439117 CCDC169A6NNP5 214 aa16.52■□□□□ 0.23
TSC2-206ENST00000439117 ZWINTO95229 277 aa16.52■□□□□ 0.23
TSC2-206ENST00000439117 LRRC23Q53EV4 343 aaPredicted RBP16.52■□□□□ 0.23
TSC2-206ENST00000439117 CACTINQ8WUQ7 758 aaKnown RBP16.52■□□□□ 0.23
TSC2-206ENST00000439117 CNKSR1Q969H4 720 aa16.52■□□□□ 0.23
TSC2-206ENST00000439117 TSPYL2Q9H2G4 693 aaPredicted RBP16.52■□□□□ 0.23
TSC2-206ENST00000439117 USP40Q9NVE5 1235 aa16.52■□□□□ 0.23
TSC2-206ENST00000439117 FRMD3A2A2Y4 597 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 PABPN1LA6NDY0 278 aaKnown RBP16.51■□□□□ 0.23
TSC2-206ENST00000439117 SLFNL1Q499Z3 407 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 LGSNQ5TDP6 509 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 PIK3AP1Q6ZUJ8 805 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 RASEFQ8IZ41 740 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 MSANTD4Q8NCY6 345 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 TMOD4Q9NZQ9 345 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 STAP2Q9UGK3 403 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 SUN1O94901 812 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 EPB41P11171 864 aaKnown RBP16.51■□□□□ 0.23
TSC2-206ENST00000439117 E2F5Q15329 346 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 CHUKO15111 745 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 ERCC3P19447 782 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 PKP1Q13835 747 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 FAM182BQ5T319 152 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 FBXO38Q6PIJ6 1188 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 KRT27Q7Z3Y8 459 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 TADA2BQ86TJ2 420 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 SSX2IPQ9Y2D8 614 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 ERVV-1B6SEH8 477 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 KLHL30Q0D2K2 578 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 DCAF17Q5H9S7 520 aaPredicted RBP16.51■□□□□ 0.23
TSC2-206ENST00000439117 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 PLIN2Q99541 437 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 THEGQ9P2T0 379 aa16.51■□□□□ 0.23
TSC2-206ENST00000439117 PPFIA2O75334 1257 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 IFNL3Q8IZI9 196 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 PHKBQ93100 1093 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 DBNLQ9UJU6 430 aaKnown RBP16.5■□□□□ 0.23
TSC2-206ENST00000439117 CYP27B1O15528 508 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 PHKA1P46020 1223 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 ZYXQ15942 572 aaKnown RBP16.5■□□□□ 0.23
TSC2-206ENST00000439117 MAIP1Q8WWC4 291 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 ZNF804BA4D1E1 1349 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 BACH1O14867 736 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 KIF1CO43896 1103 aaKnown RBP16.5■□□□□ 0.23
TSC2-206ENST00000439117 HSPD1P10809 573 aaKnown RBP16.5■□□□□ 0.23
TSC2-206ENST00000439117 RXRBP28702 533 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 PTH1RQ03431 593 aa16.5■□□□□ 0.23
TSC2-206ENST00000439117 TRMT44Q8IYL2 757 aaKnown RBP16.5■□□□□ 0.23
TSC2-206ENST00000439117 GAS8O95995 478 aa16.49■□□□□ 0.23
TSC2-206ENST00000439117 MYSM1Q5VVJ2 828 aa16.49■□□□□ 0.23
TSC2-206ENST00000439117 KRT40Q6A162 431 aa16.49■□□□□ 0.23
TSC2-206ENST00000439117 NLRP10Q86W26 655 aa16.49■□□□□ 0.23
TSC2-206ENST00000439117 CCDC105Q8IYK2 499 aa16.49■□□□□ 0.23
TSC2-206ENST00000439117 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.49■□□□□ 0.23
TSC2-206ENST00000439117 P3H4Q92791 437 aa16.49■□□□□ 0.23
TSC2-206ENST00000439117 MAPK8IP1Q9UQF2 711 aa16.49■□□□□ 0.23
TSC2-206ENST00000439117 CDC42BPGQ6DT37 1551 aa16.49■□□□□ 0.23
TSC2-206ENST00000439117 ANKRD42Q8N9B4 389 aa16.49■□□□□ 0.23
TSC2-206ENST00000439117 GSDMBQ8TAX9 411 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms