RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 REPS2Q8NFH8 660 aa17.85■□□□□ 0.45
HDAC8-213ENST00000436675 RHPN1Q8TCX5 695 aa17.85■□□□□ 0.45
HDAC8-213ENST00000436675 TOX2Q96NM4 488 aa17.85■□□□□ 0.45
HDAC8-213ENST00000436675 GAS2L1Q99501 681 aaPredicted RBP17.85■□□□□ 0.45
HDAC8-213ENST00000436675 GOPCQ9HD26 462 aa17.85■□□□□ 0.45
HDAC8-213ENST00000436675 FAM184BQ9ULE4 1060 aa17.85■□□□□ 0.45
HDAC8-213ENST00000436675 ROBO3Q96MS0 1386 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 SNAI1O95863 264 aaPredicted RBP17.84■□□□□ 0.45
HDAC8-213ENST00000436675 CCDC85BQ15834 202 aaPredicted RBP17.84■□□□□ 0.45
HDAC8-213ENST00000436675 C12orf60Q5U649 245 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 MFSD5Q6N075 450 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 C16orf59Q7L2K0 433 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 STK11IPQ8N1F8 1099 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 KLHDC9Q8NEP7 349 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 DDX11Q96FC9 970 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 PBX4Q9BYU1 374 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 PPP1R12CQ9BZL4 782 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 ATP8A2Q9NTI2 1148 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 TBX21Q9UL17 535 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 GBF1Q92538 1859 aa17.84■□□□□ 0.45
HDAC8-213ENST00000436675 IFIT2P09913 472 aaKnown RBP17.83■□□□□ 0.44
HDAC8-213ENST00000436675 C6orf222P0C671 652 aaPredicted RBP17.83■□□□□ 0.44
HDAC8-213ENST00000436675 CSF2RAP15509 400 aa17.83■□□□□ 0.44
HDAC8-213ENST00000436675 PPIGQ13427 754 aaKnown RBP eCLIP17.83■□□□□ 0.44
HDAC8-213ENST00000436675 TMEM240Q5SV17 173 aa17.83■□□□□ 0.44
HDAC8-213ENST00000436675 SNRNP48Q6IEG0 339 aaKnown RBP17.83■□□□□ 0.44
HDAC8-213ENST00000436675 C16orf86Q6ZW13 317 aa17.83■□□□□ 0.44
HDAC8-213ENST00000436675 AMOTL1Q8IY63 956 aa17.83■□□□□ 0.44
HDAC8-213ENST00000436675 BOLA2Q9H3K6 86 aa17.83■□□□□ 0.44
HDAC8-213ENST00000436675 KANSL2Q9H9L4 492 aa17.83■□□□□ 0.44
HDAC8-213ENST00000436675 RIPK3Q9Y572 518 aa17.83■□□□□ 0.44
HDAC8-213ENST00000436675 MYH7P12883 1935 aa17.82■□□□□ 0.44
HDAC8-213ENST00000436675 MOXD2PA6NHM9 499 aa17.82■□□□□ 0.44
HDAC8-213ENST00000436675 ADCY6O43306 1168 aa17.82■□□□□ 0.44
HDAC8-213ENST00000436675 COPB2P35606 906 aa17.82■□□□□ 0.44
HDAC8-213ENST00000436675 ADD2P35612 726 aa17.82■□□□□ 0.44
HDAC8-213ENST00000436675 CCSAPQ6IQ19 270 aaPredicted RBP17.82■□□□□ 0.44
HDAC8-213ENST00000436675 ZNF365Q70YC5 407 aa17.82■□□□□ 0.44
HDAC8-213ENST00000436675 CPXCR1Q8N123 301 aa17.82■□□□□ 0.44
HDAC8-213ENST00000436675 CLASRPQ8N2M8 674 aaKnown RBP17.82■□□□□ 0.44
HDAC8-213ENST00000436675 GLT1D1Q96MS3 346 aa17.82■□□□□ 0.44
HDAC8-213ENST00000436675 PAG1Q9NWQ8 432 aa17.82■□□□□ 0.44
HDAC8-213ENST00000436675 TCF20Q9UGU0 1960 aaKnown RBP17.82■□□□□ 0.44
HDAC8-213ENST00000436675 ASGR1P07306 291 aa17.81■□□□□ 0.44
HDAC8-213ENST00000436675 IGFBP4P22692 258 aa17.81■□□□□ 0.44
HDAC8-213ENST00000436675 HSP90AB4PQ58FF6 505 aa17.81■□□□□ 0.44
HDAC8-213ENST00000436675 PANK1Q8TE04 598 aa17.81■□□□□ 0.44
HDAC8-213ENST00000436675 SLF1Q9BQI6 1058 aa17.81■□□□□ 0.44
HDAC8-213ENST00000436675 SLC4A4Q9Y6R1 1079 aa17.81■□□□□ 0.44
HDAC8-213ENST00000436675 CHD7Q9P2D1 2997 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 DUSP11O75319 330 aaKnown RBP17.8■□□□□ 0.44
HDAC8-213ENST00000436675 CYP2C18P33260 490 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 CDK7P50613 346 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 ACVR2BQ13705 512 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 ADGRE1Q14246 886 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 CCDC174Q6PII3 467 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 TMEM199Q8N511 208 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.8■□□□□ 0.44
HDAC8-213ENST00000436675 DDRGK1Q96HY6 314 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 TEX13BQ9BXU2 312 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.8■□□□□ 0.44
HDAC8-213ENST00000436675 THEGQ9P2T0 379 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 MYH4Q9Y623 1939 aa17.8■□□□□ 0.44
HDAC8-213ENST00000436675 REV3LO60673 3130 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 ELP1O95163 1332 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 MROH7Q68CQ1 1323 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 ARVCFO00192 962 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 CCDC144BQ3MJ40 725 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 GNASQ5JWF2 1037 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 CTR9Q6PD62 1173 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 MSL3Q8N5Y2 521 aaKnown RBP17.79■□□□□ 0.44
HDAC8-213ENST00000436675 PCSK9Q8NBP7 692 aaKnown RBP17.79■□□□□ 0.44
HDAC8-213ENST00000436675 ADAMTS19Q8TE59 1207 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 KIF1BPQ96EK5 621 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 ASB2Q96Q27 587 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.79■□□□□ 0.44
HDAC8-213ENST00000436675 NKX2-4Q9H2Z4 354 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 SPC25Q9HBM1 224 aa17.79■□□□□ 0.44
HDAC8-213ENST00000436675 RAVER2Q9HCJ3 691 aaKnown RBP17.79■□□□□ 0.44
HDAC8-213ENST00000436675 CTDP1Q9Y5B0 961 aaPredicted RBP17.79■□□□□ 0.44
HDAC8-213ENST00000436675 DNAJC25-GNG10A0A024R161 153 aa17.78■□□□□ 0.44
HDAC8-213ENST00000436675 A0A0U1RQG5 324 aaPredicted RBP17.78■□□□□ 0.44
HDAC8-213ENST00000436675 CCER2I3L3R5 266 aa17.78■□□□□ 0.44
HDAC8-213ENST00000436675 BEX3Q00994 111 aa17.78■□□□□ 0.44
HDAC8-213ENST00000436675 RASIP1Q5U651 963 aa17.78■□□□□ 0.44
HDAC8-213ENST00000436675 MAMDC4Q6UXC1 1216 aa17.78■□□□□ 0.44
HDAC8-213ENST00000436675 ATXN2LQ8WWM7 1075 aaKnown RBP17.78■□□□□ 0.44
HDAC8-213ENST00000436675 KIFC2Q96AC6 838 aa17.78■□□□□ 0.44
HDAC8-213ENST00000436675 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.78■□□□□ 0.44
HDAC8-213ENST00000436675 CXXC1Q9P0U4 656 aaPredicted RBP17.78■□□□□ 0.44
HDAC8-213ENST00000436675 MSRAQ9UJ68 235 aa17.78■□□□□ 0.44
HDAC8-213ENST00000436675 GREB1LQ9C091 1923 aaPredicted RBP17.78■□□□□ 0.44
HDAC8-213ENST00000436675 F5H6K3 240 aa17.77■□□□□ 0.44
HDAC8-213ENST00000436675 TLR3O15455 904 aaKnown RBP17.77■□□□□ 0.44
HDAC8-213ENST00000436675 ZBED4O75132 1171 aa17.77■□□□□ 0.44
HDAC8-213ENST00000436675 NDUFB10O96000 172 aa17.77■□□□□ 0.44
HDAC8-213ENST00000436675 CST5P28325 142 aaPredicted RBP17.77■□□□□ 0.44
HDAC8-213ENST00000436675 KLRC3Q07444 240 aa17.77■□□□□ 0.44
HDAC8-213ENST00000436675 AKNAD1Q5T1N1 836 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms