RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ARHGEF39Q8N4T4 335 aa6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 KCTD13Q8WZ19 329 aa6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 NINJ1Q92982 152 aa6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 VWCEQ96DN2 955 aa6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 MFSD3Q96ES6 412 aa6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 MRPL4Q9BYD3 311 aaKnown RBP6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 STOML1Q9UBI4 398 aa6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 RAXQ9Y2V3 346 aa6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 EMC9Q9Y3B6 208 aa6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 MRPS23Q9Y3D9 190 aaKnown RBP6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 COL4A3BPQ9Y5P4 624 aa6.36□□□□□ -1.39
HMGB1P45-201ENST00000435986 IGF2BP3O00425 579 aaKnown RBP eCLIP6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 PRODHO43272 600 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 EFCAB14O75071 495 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 CBX7O95931 251 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 PABPC1P11940 636 aaKnown RBP6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 NAT1P18440 290 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 CNGA1P29973 690 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 KCNJ6P48051 423 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 PPP2R5DQ14738 602 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 PRSS36Q5K4E3 855 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 SEZ6L2Q6UXD5 910 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 ARMC10Q8N2F6 343 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 FIBCD1Q8N539 461 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 ADCY4Q8NFM4 1077 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 RIN3Q8TB24 985 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 METTL22Q9BUU2 404 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 PRDM14Q9GZV8 571 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 TRIT1Q9H3H1 467 aaKnown RBP6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 NOL6Q9H6R4 1146 aaKnown RBP6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 ARHGEF4Q9NR80 690 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 C1GALT1Q9NS00 363 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 CHST7Q9NS84 486 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 APEX2Q9UBZ4 518 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 CGGBP1Q9UFW8 167 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 RNF112Q9ULX5 631 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 CD2APQ9Y5K6 639 aa6.35□□□□□ -1.39
HMGB1P45-201ENST00000435986 FAM155AB1AL88 458 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 GSC2O15499 205 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 DYNC1LI2O43237 492 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 SIGLEC6O43699 453 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 KCNH1O95259 989 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 GSNP06396 782 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 CPEP16870 476 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 ENDOUP21128 410 aaKnown RBP6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 L1CAMP32004 1257 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 ZNF445P59923 1031 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 NMIQ13287 307 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 PRR23CQ6ZRP0 262 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 C22orf34Q6ZV56 151 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 CHAC2Q8WUX2 184 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 NCOA5Q9HCD5 579 aaKnown RBP6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 GPATCH2Q9NW75 528 aa6.34□□□□□ -1.39
HMGB1P45-201ENST00000435986 SSU72P8A0A1W2PR75 194 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 EOMESO95936 686 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 SNRPB2P08579 225 aaKnown RBP6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 SOX5P35711 763 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 FLT3P36888 993 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 MASP1P48740 699 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 GABREP78334 506 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 PABPC4Q13310 644 aaKnown RBP eCLIP6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 TKFCQ3LXA3 575 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 DALRD3Q5D0E6 543 aaKnown RBP6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 FAM209AQ5JX71 171 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 GTF2IRD2BQ6EKJ0 949 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 ZAR1Q86SH2 424 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 GTF2IRD2Q86UP8 949 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 AHI1Q8N157 1196 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 MFSD4AQ8N468 514 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 BRF1Q92994 677 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 KISS1RQ969F8 398 aaPredicted RBP6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 MRGPRX3Q96LB0 322 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 ZDHHC15Q96MV8 337 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 IER2Q9BTL4 223 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 PCDH12Q9NPG4 1184 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 ATG3Q9NT62 314 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 INTS7Q9NVH2 962 aaKnown RBP6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 GFOD1Q9NXC2 390 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 SFMBT1Q9UHJ3 866 aa6.33□□□□□ -1.4
HMGB1P45-201ENST00000435986 MAP4K2Q12851 820 aa6.32□□□□□ -1.4
HMGB1P45-201ENST00000435986 CPSF6Q16630 551 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P45-201ENST00000435986 KRT26Q7Z3Y9 468 aa6.32□□□□□ -1.4
HMGB1P45-201ENST00000435986 ZNF655Q8N720 491 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P45-201ENST00000435986 DTWD2Q8NBA8 298 aa6.32□□□□□ -1.4
HMGB1P45-201ENST00000435986 CYP26B1Q9NR63 512 aa6.32□□□□□ -1.4
HMGB1P45-201ENST00000435986 MAGEC2Q9UBF1 373 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P45-201ENST00000435986 B4E1Z4 1266 aa6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 SHOXO15266 292 aa6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 ZNF865P0CJ78 1059 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 MYCLP1P12525 358 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 ZMYM1Q5SVZ6 1142 aa6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 WWC2Q6AWC2 1192 aa6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 MAMDC2Q7Z304 686 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 DAGLBQ8NCG7 672 aa6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 BTN2A2Q8WVV5 523 aa6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 PTPRN2Q92932 1015 aa6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 SYTL4Q96C24 671 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 EXOC2Q96KP1 924 aa6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 NKX2-4Q9H2Z4 354 aa6.31□□□□□ -1.4
HMGB1P45-201ENST00000435986 CAAP1Q9H8G2 361 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms