RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 PRPF38AQ8NAV1 312 aaKnown RBP18.75■□□□□ 0.59
CALD1-208ENST00000435928 BADQ92934 168 aa18.75■□□□□ 0.59
CALD1-208ENST00000435928 CLIP2Q9UDT6 1046 aa18.75■□□□□ 0.59
CALD1-208ENST00000435928 CTDP1Q9Y5B0 961 aaPredicted RBP18.75■□□□□ 0.59
CALD1-208ENST00000435928 POTEB2H3BUK9 544 aa18.74■□□□□ 0.59
CALD1-208ENST00000435928 M0R2C6 588 aa18.74■□□□□ 0.59
CALD1-208ENST00000435928 PRDM1O75626 825 aa18.74■□□□□ 0.59
CALD1-208ENST00000435928 ZNF865P0CJ78 1059 aaPredicted RBP18.74■□□□□ 0.59
CALD1-208ENST00000435928 ZNF444Q8N0Y2 327 aaPredicted RBP18.74■□□□□ 0.59
CALD1-208ENST00000435928 MSL3Q8N5Y2 521 aaKnown RBP18.74■□□□□ 0.59
CALD1-208ENST00000435928 LENG1Q96BZ8 264 aaPredicted RBP18.74■□□□□ 0.59
CALD1-208ENST00000435928 DDX11Q96FC9 970 aa18.74■□□□□ 0.59
CALD1-208ENST00000435928 CUL9Q8IWT3 2517 aa18.74■□□□□ 0.59
CALD1-208ENST00000435928 SYNGAP1Q96PV0 1343 aa18.74■□□□□ 0.59
CALD1-208ENST00000435928 IGKV6D-41A0A0C4DH26 115 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 A0A1W2PQ45 241 aaPredicted RBP18.73■□□□□ 0.59
CALD1-208ENST00000435928 A0A1W2PQY0 241 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 ZBED4O75132 1171 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 SLC4A3P48751 1232 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 TLE2Q04725 743 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 SHHQ15465 462 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 ZNF697Q5TEC3 545 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 SH3RF1Q7Z6J0 888 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 CPXCR1Q8N123 301 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 CEP95Q96GE4 821 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 RIPK3Q9Y572 518 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 TTC41PQ6P2S7 1318 aa18.73■□□□□ 0.59
CALD1-208ENST00000435928 PLIN4Q96Q06 1357 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 TRIM43BA6NCK2 446 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 ATP2A1O14983 1001 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 CLTBP09497 229 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 C9orf50Q5SZB4 431 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 LRRC47Q8N1G4 583 aaKnown RBP18.72■□□□□ 0.59
CALD1-208ENST00000435928 KIFC2Q96AC6 838 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 TRIM43Q96BQ3 446 aaPredicted RBP18.72■□□□□ 0.59
CALD1-208ENST00000435928 FAM161BQ96MY7 647 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 GUCD1Q96NT3 240 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 NACAP1Q9BZK3 213 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 SYNPO2Q9UMS6 1093 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 CDH23Q9H251 3354 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 SYNRGQ9UMZ2 1314 aa18.72■□□□□ 0.59
CALD1-208ENST00000435928 DNAJC25-GNG10A0A024R161 153 aa18.71■□□□□ 0.59
CALD1-208ENST00000435928 PATL2C9JE40 543 aaKnown RBP18.71■□□□□ 0.59
CALD1-208ENST00000435928 ERC2O15083 957 aa18.71■□□□□ 0.59
CALD1-208ENST00000435928 PQBP1O60828 265 aaKnown RBP18.71■□□□□ 0.59
CALD1-208ENST00000435928 ADAMTS4O75173 837 aa18.71■□□□□ 0.59
CALD1-208ENST00000435928 TTLL1O95922 423 aa18.71■□□□□ 0.59
CALD1-208ENST00000435928 IFNL3Q8IZI9 196 aa18.71■□□□□ 0.59
CALD1-208ENST00000435928 SLC38A10Q9HBR0 1119 aa18.71■□□□□ 0.59
CALD1-208ENST00000435928 FEM1BQ9UK73 627 aa18.71■□□□□ 0.59
CALD1-208ENST00000435928 ZHX1Q9UKY1 873 aaPredicted RBP18.71■□□□□ 0.59
CALD1-208ENST00000435928 FAM184BQ9ULE4 1060 aa18.71■□□□□ 0.59
CALD1-208ENST00000435928 TACC3Q9Y6A5 838 aa18.71■□□□□ 0.59
CALD1-208ENST00000435928 TSPY3P0CV98 308 aa18.7■□□□□ 0.58
CALD1-208ENST00000435928 TSPY8P0CW00 308 aa18.7■□□□□ 0.58
CALD1-208ENST00000435928 PDE4BQ07343 736 aa18.7■□□□□ 0.58
CALD1-208ENST00000435928 MAMDC4Q6UXC1 1216 aa18.7■□□□□ 0.58
CALD1-208ENST00000435928 ZNF467Q7Z7K2 595 aaPredicted RBP18.7■□□□□ 0.58
CALD1-208ENST00000435928 ANKRD35Q8N283 1001 aa18.7■□□□□ 0.58
CALD1-208ENST00000435928 GMCL1P1Q8NEA9 526 aa18.7■□□□□ 0.58
CALD1-208ENST00000435928 MKL1Q969V6 931 aa18.7■□□□□ 0.58
CALD1-208ENST00000435928 TSEN34Q9BSV6 310 aaKnown RBP18.7■□□□□ 0.58
CALD1-208ENST00000435928 FSD1Q9BTV5 496 aa18.7■□□□□ 0.58
CALD1-208ENST00000435928 RAVER2Q9HCJ3 691 aaKnown RBP18.7■□□□□ 0.58
CALD1-208ENST00000435928 FBXO40Q9UH90 709 aa18.7■□□□□ 0.58
CALD1-208ENST00000435928 ISY1Q9ULR0 285 aaKnown RBP18.7■□□□□ 0.58
CALD1-208ENST00000435928 SNAI1O95863 264 aaPredicted RBP18.69■□□□□ 0.58
CALD1-208ENST00000435928 SLC3A2P08195 630 aaKnown RBP18.69■□□□□ 0.58
CALD1-208ENST00000435928 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.69■□□□□ 0.58
CALD1-208ENST00000435928 PI4K2BQ8TCG2 481 aa18.69■□□□□ 0.58
CALD1-208ENST00000435928 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
CALD1-208ENST00000435928 SEC62Q99442 399 aaKnown RBP18.69■□□□□ 0.58
CALD1-208ENST00000435928 NAPBQ9H115 298 aa18.69■□□□□ 0.58
CALD1-208ENST00000435928 STARD7Q9NQZ5 370 aa18.69■□□□□ 0.58
CALD1-208ENST00000435928 MOXD2PA6NHM9 499 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 BMP3P12645 472 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 RAG1P15918 1043 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 ACLYP53396 1101 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 OAZ1P54368 228 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 SLFN13Q68D06 897 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 CHST13Q8NET6 341 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 NEDD1Q8NHV4 660 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 PRUNE2Q8WUY3 3088 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 LRRC37A2A6NM11 1700 aa18.68■□□□□ 0.58
CALD1-208ENST00000435928 KIAA0355O15063 1070 aa18.67■□□□□ 0.58
CALD1-208ENST00000435928 DUSP11O75319 330 aaKnown RBP18.67■□□□□ 0.58
CALD1-208ENST00000435928 ITGB8P26012 769 aa18.67■□□□□ 0.58
CALD1-208ENST00000435928 SMAD3P84022 425 aaKnown RBP18.67■□□□□ 0.58
CALD1-208ENST00000435928 PPARAQ07869 468 aa18.67■□□□□ 0.58
CALD1-208ENST00000435928 ACVR2BQ13705 512 aa18.67■□□□□ 0.58
CALD1-208ENST00000435928 HOMER2Q9NSB8 354 aa18.67■□□□□ 0.58
CALD1-208ENST00000435928 TMEM39AQ9NV64 488 aa18.67■□□□□ 0.58
CALD1-208ENST00000435928 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.67■□□□□ 0.58
CALD1-208ENST00000435928 DCDC2CA8MYV0 355 aa18.66■□□□□ 0.58
CALD1-208ENST00000435928 FDX1P10109 184 aa18.66■□□□□ 0.58
CALD1-208ENST00000435928 MX1P20591 662 aa18.66■□□□□ 0.58
CALD1-208ENST00000435928 STAT2P52630 851 aa18.66■□□□□ 0.58
CALD1-208ENST00000435928 TFAP4Q01664 338 aa18.66■□□□□ 0.58
CALD1-208ENST00000435928 IKQ13123 557 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms