RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RAD51AP2Q09MP3 1159 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 NAALADL2Q58DX5 795 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 KAT14Q9H8E8 782 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 TAB2Q9NYJ8 693 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 LAMB1P07942 1786 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 TRIM49BA6NDI0 452 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 GOLGA8HP0CJ92 632 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 CCDC34Q96HJ3 373 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 PANX2Q96RD6 677 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 MAD2L2Q9UI95 211 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 USP5P45974 858 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 PPFIBP1Q86W92 1011 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 ACRBPQ8NEB7 543 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 ARHGEF1Q92888 912 aaKnown RBP11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 ZSWIM4Q9H7M6 989 aa11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 SAP30BPQ9UHR5 308 aaKnown RBP11.76□□□□□ -0.53
CLSTN1-203ENST00000435891 M0R2N6 131 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 ZPR1O75312 459 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 PRCPP42785 496 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 PMS1P54277 932 aaKnown RBP11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 WWC2Q6AWC2 1192 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 CCDC12Q8WUD4 166 aaPredicted RBP11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 TGFBRAP1Q8WUH2 860 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 PDS5AQ29RF7 1337 aaKnown RBP11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 EFCAB8A8MWE9 144 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 CCDC175P0C221 793 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 ERVK-24P63145 666 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 INF2Q27J81 1249 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 TPTE2Q6XPS3 522 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 NELFBQ8WX92 580 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 EEF2KMTQ96G04 330 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 ANKIB1Q9P2G1 1089 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 N4BP3O15049 544 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 ZRANB2O95218 330 aaKnown RBP eCLIP11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 RPN1P04843 607 aaKnown RBP11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 PIP4K2BP78356 416 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 PPP2R3AQ06190 1150 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 PCDHA4Q9UN74 947 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 MYH8P13535 1937 aa11.75□□□□□ -0.53
CLSTN1-203ENST00000435891 KIF5BP33176 963 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 PAK1Q13153 545 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 CT47A1Q5JQC4 288 aaPredicted RBP11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 IRF2BP1Q8IU81 584 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 MAPKAPK5Q8IW41 473 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 SRRTQ9BXP5 876 aaKnown RBP11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 PCDHA6Q9UN73 950 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 STX8Q9UNK0 236 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 PCDHA8Q9Y5H6 950 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 TNRC6CQ9HCJ0 1690 aaKnown RBP11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 GOLGA6L9A6NEM1 432 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 LDHBP07195 334 aaKnown RBP11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 PLA2G4AP47712 749 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 GYS2P54840 703 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 SLC20A2Q08357 652 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 HEATR3Q7Z4Q2 680 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 GOLGA6L1Q8N7Z2 621 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 COPB1P53618 953 aaKnown RBP11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 DGKHQ86XP1 1220 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 CTAGE1Q96RT6 745 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 LIMA1Q9UHB6 759 aaKnown RBP11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 RWDD2AQ9UIY3 292 aa11.74□□□□□ -0.53
CLSTN1-203ENST00000435891 CCDC88AQ3V6T2 1871 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 LRRC10BA6NIK2 292 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 SASH3O75995 380 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 STAT6P42226 847 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 GRM4Q14833 912 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 TCP11X2Q5H9J9 407 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 ZNF658Q5TYW1 1059 aaPredicted RBP11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 DRC1Q96MC2 740 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 TMEM47Q9BQJ4 181 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 DISC1Q9NRI5 854 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 KCNJ18B7U540 433 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 TSPY3P0CV98 308 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 TSPY8P0CW00 308 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 KCNJ12Q14500 433 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 FILIP1LQ4L180 1135 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 RSRC2Q7L4I2 434 aaKnown RBP11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 C8orf37Q96NL8 207 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 TRIM66O15016 1216 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 CALML3P27482 149 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 LONP1P36776 959 aaKnown RBP11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 ARL6IP4Q66PJ3 421 aaKnown RBP11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 EP400NLQ6ZTU2 488 aa11.73□□□□□ -0.53
CLSTN1-203ENST00000435891 CCDC194A0A1B0GVG4 234 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 STXBP3O00186 592 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 GPS2Q13227 327 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 BMS1Q14692 1282 aaKnown RBP11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 CHP1Q99653 195 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 ABHD10Q9NUJ1 306 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 CCNL1Q9UK58 526 aaPredicted RBP11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 RASA1P20936 1047 aa11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 RTCBQ9Y3I0 505 aaKnown RBP11.72□□□□□ -0.53
CLSTN1-203ENST00000435891 CLGNO14967 610 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms