RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 TMEM179Q6ZVK1 233 aa17.34■□□□□ 0.37
NEDD4-202ENST00000435532 ZMYND15Q9H091 742 aa17.34■□□□□ 0.37
NEDD4-202ENST00000435532 SPATA31A1Q5TZJ5 1347 aa17.34■□□□□ 0.37
NEDD4-202ENST00000435532 ADCY9O60503 1353 aa17.34■□□□□ 0.37
NEDD4-202ENST00000435532 SORBS3O60504 671 aa17.34■□□□□ 0.37
NEDD4-202ENST00000435532 MECOMQ03112 1051 aa17.34■□□□□ 0.37
NEDD4-202ENST00000435532 SEPT14Q6ZU15 432 aa17.34■□□□□ 0.37
NEDD4-202ENST00000435532 TBC1D7Q9P0N9 293 aa17.34■□□□□ 0.37
NEDD4-202ENST00000435532 AXIN2Q9Y2T1 843 aa17.34■□□□□ 0.37
NEDD4-202ENST00000435532 SKILP12757 684 aa17.33■□□□□ 0.37
NEDD4-202ENST00000435532 AOC3Q16853 763 aa17.33■□□□□ 0.37
NEDD4-202ENST00000435532 MIGA2Q7L4E1 593 aa17.33■□□□□ 0.37
NEDD4-202ENST00000435532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.33■□□□□ 0.37
NEDD4-202ENST00000435532 FAM204AQ9H8W3 233 aa17.33■□□□□ 0.37
NEDD4-202ENST00000435532 PAXBP1Q9Y5B6 917 aa17.33■□□□□ 0.37
NEDD4-202ENST00000435532 PSDA5PKW4 1024 aaPredicted RBP17.33■□□□□ 0.37
NEDD4-202ENST00000435532 IQCDQ96DY2 449 aa17.33■□□□□ 0.37
NEDD4-202ENST00000435532 FBXO40Q9UH90 709 aa17.33■□□□□ 0.37
NEDD4-202ENST00000435532 K7ENM7 598 aa17.33■□□□□ 0.36
NEDD4-202ENST00000435532 SPOPO43791 374 aa17.33■□□□□ 0.36
NEDD4-202ENST00000435532 PFKFB2O60825 505 aa17.33■□□□□ 0.36
NEDD4-202ENST00000435532 HLFQ16534 295 aa17.33■□□□□ 0.36
NEDD4-202ENST00000435532 NOSTRINQ8IVI9 506 aa17.33■□□□□ 0.36
NEDD4-202ENST00000435532 ZNF830Q96NB3 372 aaPredicted RBP17.33■□□□□ 0.36
NEDD4-202ENST00000435532 STIM2Q9P246 746 aa17.33■□□□□ 0.36
NEDD4-202ENST00000435532 LEO1Q8WVC0 666 aaPredicted RBP17.33■□□□□ 0.36
NEDD4-202ENST00000435532 UIMC1Q96RL1 719 aa17.33■□□□□ 0.36
NEDD4-202ENST00000435532 WDR11Q9BZH6 1224 aa17.33■□□□□ 0.36
NEDD4-202ENST00000435532 LARSQ9P2J5 1176 aaKnown RBP17.33■□□□□ 0.36
NEDD4-202ENST00000435532 TRPM1Q7Z4N2 1603 aa17.33■□□□□ 0.36
NEDD4-202ENST00000435532 CFAP58Q5T655 872 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 ARHGEF37A1IGU5 675 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 AKR1B15C9JRZ8 316 aaPredicted RBP17.32■□□□□ 0.36
NEDD4-202ENST00000435532 LAD1O00515 517 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 ZSCAN20P17040 1043 aaPredicted RBP17.32■□□□□ 0.36
NEDD4-202ENST00000435532 R3HDM1Q15032 1099 aaKnown RBP17.32■□□□□ 0.36
NEDD4-202ENST00000435532 INF2Q27J81 1249 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 COL4A3BPQ9Y5P4 624 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 CEP152O94986 1710 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 BIRC2Q13490 618 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 SEC62Q99442 399 aaKnown RBP17.32■□□□□ 0.36
NEDD4-202ENST00000435532 ZNF577Q9BSK1 485 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 MIS12Q9H081 205 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 CGNQ9P2M7 1197 aaKnown RBP17.32■□□□□ 0.36
NEDD4-202ENST00000435532 BRPF3Q9ULD4 1205 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 DIP2CQ9Y2E4 1556 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 ZNF853P0CG23 659 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 POSTNQ15063 836 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 KCTD1Q719H9 257 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 NELFCDQ8IXH7 590 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 CCDC114Q96M63 670 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 HOXC10Q9NYD6 342 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 AKT3Q9Y243 479 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 PPP1R7Q15435 360 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 IFNKQ9P0W0 207 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 ARHGEF40Q8TER5 1519 aa17.32■□□□□ 0.36
NEDD4-202ENST00000435532 E7EVH7 732 aa17.31■□□□□ 0.36
NEDD4-202ENST00000435532 GCFC2P16383 781 aaKnown RBP17.31■□□□□ 0.36
NEDD4-202ENST00000435532 TECP42680 631 aa17.31■□□□□ 0.36
NEDD4-202ENST00000435532 LRCH2Q5VUJ6 765 aa17.31■□□□□ 0.36
NEDD4-202ENST00000435532 CTR9Q6PD62 1173 aa17.31■□□□□ 0.36
NEDD4-202ENST00000435532 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
NEDD4-202ENST00000435532 STAP2Q9UGK3 403 aa17.31■□□□□ 0.36
NEDD4-202ENST00000435532 SEPT9Q9UHD8 586 aaPredicted RBP17.31■□□□□ 0.36
NEDD4-202ENST00000435532 TICAM2Q86XR7 235 aa17.31■□□□□ 0.36
NEDD4-202ENST00000435532 TUBB4BP68371 445 aa17.31■□□□□ 0.36
NEDD4-202ENST00000435532 RAD51AP2Q09MP3 1159 aa17.31■□□□□ 0.36
NEDD4-202ENST00000435532 DCUN1D2Q6PH85 259 aa17.31■□□□□ 0.36
NEDD4-202ENST00000435532 ZNF277Q9NRM2 450 aaPredicted RBP17.31■□□□□ 0.36
NEDD4-202ENST00000435532 TLR3O15455 904 aaKnown RBP17.31■□□□□ 0.36
NEDD4-202ENST00000435532 NUCKS1Q9H1E3 243 aaKnown RBP17.31■□□□□ 0.36
NEDD4-202ENST00000435532 LRRIQ4A6NIV6 560 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 UBL4BQ8N7F7 174 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 DCAF4Q8WV16 495 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
NEDD4-202ENST00000435532 MTRF1LQ9UGC7 380 aaKnown RBP17.3■□□□□ 0.36
NEDD4-202ENST00000435532 TNNC1P63316 161 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 SLC7A3Q8WY07 619 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 USP17L5A8MUK1 530 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 COPB2P35606 906 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 ANO3Q9BYT9 981 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 M0R2C6 588 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 KIF11P52732 1056 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 SLC16A10Q8TF71 515 aa17.3■□□□□ 0.36
NEDD4-202ENST00000435532 ZNF202O95125 648 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 FAM178BQ8IXR5 827 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 MYOCDQ8IZQ8 938 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 CLSTN2Q9H4D0 955 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 MAGEF1Q9HAY2 307 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 PCDHA4Q9UN74 947 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 MINPP1Q9UNW1 487 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 PTPN12Q05209 780 aaKnown RBP17.29■□□□□ 0.36
NEDD4-202ENST00000435532 SND1Q7KZF4 910 aaKnown RBP eCLIP17.29■□□□□ 0.36
NEDD4-202ENST00000435532 LCORLQ8N3X6 602 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 NELFBQ8WX92 580 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 TMEM191BP0C7N4 346 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 NLRP12P59046 1061 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 USP17L2Q6R6M4 530 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 METTL23Q86XA0 190 aa17.29■□□□□ 0.36
NEDD4-202ENST00000435532 CDC42BPBQ9Y5S2 1711 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms