RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 TRAF1Q13077 416 aa19.23■□□□□ 0.67
CTDSPL-204ENST00000435525 BTNL9Q6UXG8 535 aa19.23■□□□□ 0.67
CTDSPL-204ENST00000435525 P2RX7Q99572 595 aaKnown RBP19.23■□□□□ 0.67
CTDSPL-204ENST00000435525 PALM3A6NDB9 673 aaPredicted RBP19.22■□□□□ 0.67
CTDSPL-204ENST00000435525 GOLGA8HP0CJ92 632 aa19.22■□□□□ 0.67
CTDSPL-204ENST00000435525 SMARCA1P28370 1054 aa19.22■□□□□ 0.67
CTDSPL-204ENST00000435525 PDIA3P30101 505 aaKnown RBP19.22■□□□□ 0.67
CTDSPL-204ENST00000435525 NOL8Q76FK4 1167 aaKnown RBP19.22■□□□□ 0.67
CTDSPL-204ENST00000435525 CCAR1Q8IX12 1150 aaKnown RBP19.22■□□□□ 0.67
CTDSPL-204ENST00000435525 CCDC144CPQ8IYA2 1237 aa19.22■□□□□ 0.67
CTDSPL-204ENST00000435525 SH2B1Q9NRF2 756 aaPredicted RBP19.22■□□□□ 0.67
CTDSPL-204ENST00000435525 MAD2L2Q9UI95 211 aa19.22■□□□□ 0.67
CTDSPL-204ENST00000435525 PHIPQ8WWQ0 1821 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 TLR2O60603 784 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 TRPA1O75762 1119 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 CDKL5O76039 1030 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 CYP2C8P10632 490 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 CCNA1P78396 465 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 LBX2Q6XYB7 198 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 FBXO28Q9NVF7 368 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 RNF186Q9NXI6 227 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 RABGAP1Q9Y3P9 1069 aa19.21■□□□□ 0.67
CTDSPL-204ENST00000435525 SPDYE16A6NNV3 312 aaPredicted RBP19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 RXRAP19793 462 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 COPB2P35606 906 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 SLC16A2P36021 539 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 AKAP17AQ02040 695 aaKnown RBP19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 CRHR2Q13324 411 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 TTBK2Q6IQ55 1244 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 RAB11FIP4Q86YS3 637 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 ATG4CQ96DT6 458 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 PAGR1Q9BTK6 254 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 CFHR5Q9BXR6 569 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 RBM27Q9P2N5 1060 aaKnown RBP19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 SEC63Q9UGP8 760 aaKnown RBP19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 PRR12Q9ULL5 1215 aa19.2■□□□□ 0.66
CTDSPL-204ENST00000435525 VWA5AO00534 786 aa19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 STK3Q13188 491 aa19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 STAG2Q8N3U4 1231 aa19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 GPRC5AQ8NFJ5 357 aa19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 RRP36Q96EU6 259 aaKnown RBP19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 LARP6Q9BRS8 491 aaKnown RBP19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 SPZ1Q9BXG8 430 aa19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 UBA5Q9GZZ9 404 aa19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 TPCN1Q9ULQ1 816 aa19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 LOC285556D6RIA3 1793 aa19.19■□□□□ 0.66
CTDSPL-204ENST00000435525 PFKFB2O60825 505 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 OAZ1P54368 228 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 CCT2P78371 535 aaKnown RBP19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 PLS1Q14651 629 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 KIF22Q14807 665 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 ARHGEF6Q15052 776 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 FAM110CQ1W6H9 321 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 TMTC3Q6ZXV5 915 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 RASGRP2Q7LDG7 609 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 TRIM22Q8IYM9 498 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 ADGRF4Q8IZF3 695 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 JMYQ8N9B5 988 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 VAT1LQ9HCJ6 419 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 WBP1LQ9NX94 342 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 NID2Q14112 1375 aa19.18■□□□□ 0.66
CTDSPL-204ENST00000435525 MYH4Q9Y623 1939 aa19.17■□□□□ 0.66
CTDSPL-204ENST00000435525 ANKRD13CQ8N6S4 541 aa19.17■□□□□ 0.66
CTDSPL-204ENST00000435525 RIOX1Q9H6W3 641 aa19.17■□□□□ 0.66
CTDSPL-204ENST00000435525 SLC38A10Q9HBR0 1119 aa19.17■□□□□ 0.66
CTDSPL-204ENST00000435525 ADAMTS5Q9UNA0 930 aa19.17■□□□□ 0.66
CTDSPL-204ENST00000435525 HPS5Q9UPZ3 1129 aa19.17■□□□□ 0.66
CTDSPL-204ENST00000435525 THSD7BQ9C0I4 1608 aa19.17■□□□□ 0.66
CTDSPL-204ENST00000435525 TBC1D8O95759 1140 aa19.16■□□□□ 0.66
CTDSPL-204ENST00000435525 SLC25A27O95847 323 aa19.16■□□□□ 0.66
CTDSPL-204ENST00000435525 CDC37Q16543 378 aaPredicted RBP19.16■□□□□ 0.66
CTDSPL-204ENST00000435525 HSCBQ8IWL3 235 aa19.16■□□□□ 0.66
CTDSPL-204ENST00000435525 TEX13BQ9BXU2 312 aa19.16■□□□□ 0.66
CTDSPL-204ENST00000435525 RANBP17Q9H2T7 1088 aaKnown RBP19.16■□□□□ 0.66
CTDSPL-204ENST00000435525 MORF4L1Q9UBU8 362 aa19.16■□□□□ 0.66
CTDSPL-204ENST00000435525 CPA4Q9UI42 421 aa19.16■□□□□ 0.66
CTDSPL-204ENST00000435525 ATP2A1O14983 1001 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 ZBTB5O15062 677 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 PLEKHA8P1O95397 391 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 ADD1P35611 737 aaKnown RBP19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 STAT3P40763 770 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 ERVK-9P63128 1117 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 ERVK-24P63145 666 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 SSRP1Q08945 709 aaKnown RBP19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 ME3Q16798 604 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 TKFCQ3LXA3 575 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 NOM1Q5C9Z4 860 aaKnown RBP19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 CCDC174Q6PII3 467 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 C17orf99Q6UX52 265 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 HOMER1Q86YM7 354 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 CPXCR1Q8N123 301 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 CCDC82Q8N4S0 544 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 SRBD1Q8N5C6 995 aaKnown RBP19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 JMJD4Q9H9V9 463 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 RBPJLQ9UBG7 517 aa19.15■□□□□ 0.66
CTDSPL-204ENST00000435525 PNMA6FA0A0J9YX94 578 aa19.14■□□□□ 0.65
CTDSPL-204ENST00000435525 ICAM1P05362 532 aa19.14■□□□□ 0.65
CTDSPL-204ENST00000435525 IFNAR1P17181 557 aa19.14■□□□□ 0.65
CTDSPL-204ENST00000435525 CDC27P30260 824 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms