RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 CCL15Q16663 113 aa19.28■□□□□ 0.68
CCDC13-202ENST00000435327 SLC35G1Q2M3R5 365 aa19.28■□□□□ 0.68
CCDC13-202ENST00000435327 SYDE2Q5VT97 1194 aa19.28■□□□□ 0.68
CCDC13-202ENST00000435327 FASTKD5Q7L8L6 764 aaKnown RBP19.28■□□□□ 0.68
CCDC13-202ENST00000435327 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
CCDC13-202ENST00000435327 HHIPL1Q96JK4 782 aa19.28■□□□□ 0.68
CCDC13-202ENST00000435327 RNF26Q9BY78 433 aaPredicted RBP19.28■□□□□ 0.68
CCDC13-202ENST00000435327 CREBZFQ9NS37 354 aa19.28■□□□□ 0.68
CCDC13-202ENST00000435327 FBXO28Q9NVF7 368 aa19.28■□□□□ 0.68
CCDC13-202ENST00000435327 ORC3Q9UBD5 711 aaPredicted RBP19.28■□□□□ 0.68
CCDC13-202ENST00000435327 USP17L15C9J2P7 530 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 USP17L13C9JLJ4 530 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 USP17L11C9JVI0 530 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 USP17L18D6R9N7 530 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 USP17L22D6RA61 530 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 USP17L17D6RBQ6 530 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 USP17L19D6RCP7 530 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 USP17L20D6RJB6 530 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 CYTH3O43739 400 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 FLOT1O75955 427 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 SMARCA1P28370 1054 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 GJB2P29033 226 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 USP17L24Q0WX57 530 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 TREML2Q5T2D2 321 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 BTNL9Q6UXG8 535 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 CCDC102AQ96A19 550 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 RIOX1Q9H6W3 641 aa19.27■□□□□ 0.68
CCDC13-202ENST00000435327 STK36Q9NRP7 1315 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 hCG_1642624A0A1W2PR95 340 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 PRPF3O43395 683 aaKnown RBP19.26■□□□□ 0.67
CCDC13-202ENST00000435327 PLA2G6O60733 806 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 GRM1Q13255 1194 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 MOGSQ13724 837 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 CATSPERGQ6ZRH7 1159 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 HOMER1Q86YM7 354 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 ADGRF4Q8IZF3 695 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 FAM184AQ8NB25 1140 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 KIFC2Q96AC6 838 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 RRP36Q96EU6 259 aaKnown RBP19.26■□□□□ 0.67
CCDC13-202ENST00000435327 MS4A4AQ96JQ5 239 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 SLF1Q9BQI6 1058 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 PRR12Q9ULL5 1215 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 AGTPBP1Q9UPW5 1226 aa19.26■□□□□ 0.67
CCDC13-202ENST00000435327 V9GY48 417 aaPredicted RBP19.26■□□□□ 0.67
CCDC13-202ENST00000435327 RLFQ13129 1914 aa19.25■□□□□ 0.67
CCDC13-202ENST00000435327 PABPC4Q13310 644 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCDC13-202ENST00000435327 PIGSQ96S52 555 aa19.25■□□□□ 0.67
CCDC13-202ENST00000435327 JMJD4Q9H9V9 463 aa19.25■□□□□ 0.67
CCDC13-202ENST00000435327 RBM27Q9P2N5 1060 aaKnown RBP19.25■□□□□ 0.67
CCDC13-202ENST00000435327 SEC63Q9UGP8 760 aaKnown RBP19.25■□□□□ 0.67
CCDC13-202ENST00000435327 COL11A1P12107 1806 aaPredicted RBP19.24■□□□□ 0.67
CCDC13-202ENST00000435327 MANSC4A6NHS7 340 aaPredicted RBP19.24■□□□□ 0.67
CCDC13-202ENST00000435327 FAM155AB1AL88 458 aaPredicted RBP19.24■□□□□ 0.67
CCDC13-202ENST00000435327 DEXIO95424 95 aa19.24■□□□□ 0.67
CCDC13-202ENST00000435327 FDPSP14324 419 aaKnown RBP19.24■□□□□ 0.67
CCDC13-202ENST00000435327 SNAP25P60880 206 aa19.24■□□□□ 0.67
CCDC13-202ENST00000435327 IRX3P78415 501 aaPredicted RBP19.24■□□□□ 0.67
CCDC13-202ENST00000435327 DEFB115Q30KQ5 88 aa19.24■□□□□ 0.67
CCDC13-202ENST00000435327 CYP4F22Q6NT55 531 aa19.24■□□□□ 0.67
CCDC13-202ENST00000435327 GPAT2Q6NUI2 795 aa19.24■□□□□ 0.67
CCDC13-202ENST00000435327 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
CCDC13-202ENST00000435327 BRI3BPQ8WY22 251 aa19.24■□□□□ 0.67
CCDC13-202ENST00000435327 PPP1R9AQ9ULJ8 1098 aa19.24■□□□□ 0.67
CCDC13-202ENST00000435327 KIF3AQ9Y496 699 aa19.24■□□□□ 0.67
CCDC13-202ENST00000435327 RASSF10A6NK89 507 aa19.23■□□□□ 0.67
CCDC13-202ENST00000435327 HOXA7P31268 230 aaPredicted RBP19.23■□□□□ 0.67
CCDC13-202ENST00000435327 DSG3P32926 999 aa19.23■□□□□ 0.67
CCDC13-202ENST00000435327 FOSBP53539 338 aa19.23■□□□□ 0.67
CCDC13-202ENST00000435327 COG2Q14746 738 aa19.23■□□□□ 0.67
CCDC13-202ENST00000435327 CDC37Q16543 378 aaPredicted RBP19.23■□□□□ 0.67
CCDC13-202ENST00000435327 WASF1Q92558 559 aa19.23■□□□□ 0.67
CCDC13-202ENST00000435327 CTDP1Q9Y5B0 961 aaPredicted RBP19.23■□□□□ 0.67
CCDC13-202ENST00000435327 BTBD19C9JJ37 291 aa19.22■□□□□ 0.67
CCDC13-202ENST00000435327 SCG2P13521 617 aa19.22■□□□□ 0.67
CCDC13-202ENST00000435327 OSBPP22059 807 aa19.22■□□□□ 0.67
CCDC13-202ENST00000435327 QRICH1Q2TAL8 776 aa19.22■□□□□ 0.67
CCDC13-202ENST00000435327 ANKRD23Q86SG2 305 aa19.22■□□□□ 0.67
CCDC13-202ENST00000435327 ATG4CQ96DT6 458 aa19.22■□□□□ 0.67
CCDC13-202ENST00000435327 MTMR8Q96EF0 704 aa19.22■□□□□ 0.67
CCDC13-202ENST00000435327 ALG1Q9BT22 464 aa19.22■□□□□ 0.67
CCDC13-202ENST00000435327 CWC22Q9HCG8 908 aaKnown RBP19.22■□□□□ 0.67
CCDC13-202ENST00000435327 PNMA6FA0A0J9YX94 578 aa19.21■□□□□ 0.67
CCDC13-202ENST00000435327 PKN1Q16512 942 aa19.21■□□□□ 0.67
CCDC13-202ENST00000435327 PFKFB3Q16875 520 aaPredicted RBP19.21■□□□□ 0.67
CCDC13-202ENST00000435327 CAPNS2Q96L46 248 aa19.21■□□□□ 0.67
CCDC13-202ENST00000435327 AIFM3Q96NN9 605 aa19.21■□□□□ 0.67
CCDC13-202ENST00000435327 ASCC2Q9H1I8 757 aaPredicted RBP19.21■□□□□ 0.67
CCDC13-202ENST00000435327 RANBP17Q9H2T7 1088 aaKnown RBP19.21■□□□□ 0.67
CCDC13-202ENST00000435327 PNMA3Q9UL41 463 aa19.21■□□□□ 0.67
CCDC13-202ENST00000435327 MYPNQ86TC9 1320 aa19.21■□□□□ 0.67
CCDC13-202ENST00000435327 A0A0G2JMZ2 1700 aa19.2■□□□□ 0.66
CCDC13-202ENST00000435327 TESPA1A2RU30 521 aaPredicted RBP19.2■□□□□ 0.66
CCDC13-202ENST00000435327 SPDYE16A6NNV3 312 aaPredicted RBP19.2■□□□□ 0.66
CCDC13-202ENST00000435327 PDHXO00330 501 aa19.2■□□□□ 0.66
CCDC13-202ENST00000435327 ZBTB5O15062 677 aa19.2■□□□□ 0.66
CCDC13-202ENST00000435327 ZBED4O75132 1171 aa19.2■□□□□ 0.66
CCDC13-202ENST00000435327 CCDC174Q6PII3 467 aa19.2■□□□□ 0.66
CCDC13-202ENST00000435327 HEATR3Q7Z4Q2 680 aa19.2■□□□□ 0.66
CCDC13-202ENST00000435327 GPKOWQ92917 476 aaPredicted RBP eCLIP19.2■□□□□ 0.66
CCDC13-202ENST00000435327 HOXC10Q9NYD6 342 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms