RNA–Protein interactions for RNA: ENST00000434467.5

CCDC66-206, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,413 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-206ENST00000434467 SUPT20HL1Q3ZLR7 823 aa13.54□□□□□ -0.24
CCDC66-206ENST00000434467 DCAF4Q8WV16 495 aa13.54□□□□□ -0.24
CCDC66-206ENST00000434467 FEZ1Q99689 392 aa13.54□□□□□ -0.24
CCDC66-206ENST00000434467 VCPKMTQ9H867 229 aa13.54□□□□□ -0.24
CCDC66-206ENST00000434467 SNCAIPQ9Y6H5 919 aa13.54□□□□□ -0.24
CCDC66-206ENST00000434467 ZHX2Q9Y6X8 837 aa13.54□□□□□ -0.24
CCDC66-206ENST00000434467 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
CCDC66-206ENST00000434467 GMCL1Q96IK5 515 aa13.53□□□□□ -0.24
CCDC66-206ENST00000434467 USP28Q96RU2 1077 aa13.53□□□□□ -0.24
CCDC66-206ENST00000434467 ZNF408Q9H9D4 720 aa13.53□□□□□ -0.24
CCDC66-206ENST00000434467 EMILIN3Q9NT22 766 aa13.53□□□□□ -0.24
CCDC66-206ENST00000434467 RLFQ13129 1914 aa13.53□□□□□ -0.24
CCDC66-206ENST00000434467 COL11A1P12107 1806 aaPredicted RBP13.53□□□□□ -0.24
CCDC66-206ENST00000434467 TRIM29Q14134 588 aa13.53□□□□□ -0.24
CCDC66-206ENST00000434467 WASF1Q92558 559 aa13.53□□□□□ -0.24
CCDC66-206ENST00000434467 IKQ13123 557 aaPredicted RBP13.52□□□□□ -0.24
CCDC66-206ENST00000434467 GPATCH4Q5T3I0 446 aaKnown RBP13.52□□□□□ -0.24
CCDC66-206ENST00000434467 RRP36Q96EU6 259 aaKnown RBP13.52□□□□□ -0.24
CCDC66-206ENST00000434467 PCNTO95613 3336 aa13.52□□□□□ -0.25
CCDC66-206ENST00000434467 U2AF2P26368 475 aaKnown RBP eCLIP13.52□□□□□ -0.25
CCDC66-206ENST00000434467 QRICH1Q2TAL8 776 aa13.52□□□□□ -0.25
CCDC66-206ENST00000434467 PNMA8AQ86V59 439 aaPredicted RBP13.52□□□□□ -0.25
CCDC66-206ENST00000434467 LZTS2Q9BRK4 669 aa13.52□□□□□ -0.25
CCDC66-206ENST00000434467 GOPCQ9HD26 462 aa13.52□□□□□ -0.25
CCDC66-206ENST00000434467 BARHL2Q9NY43 387 aa13.52□□□□□ -0.25
CCDC66-206ENST00000434467 CLIC4Q9Y696 253 aa13.52□□□□□ -0.25
CCDC66-206ENST00000434467 TOB1P50616 345 aaPredicted RBP13.51□□□□□ -0.25
CCDC66-206ENST00000434467 HMGCS2P54868 508 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 NLRP5P59047 1200 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 MYSM1Q5VVJ2 828 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 TNFRSF25Q93038 417 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 MTMR8Q96EF0 704 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 ZSCAN16Q9H4T2 348 aaPredicted RBP13.51□□□□□ -0.25
CCDC66-206ENST00000434467 ELP3Q9H9T3 547 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 PICK1Q9NRD5 415 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 PRR12Q9ULL5 1215 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 TTLL12Q14166 644 aaPredicted RBP13.51□□□□□ -0.25
CCDC66-206ENST00000434467 CDC37Q16543 378 aaPredicted RBP13.51□□□□□ -0.25
CCDC66-206ENST00000434467 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 KIFC2Q96AC6 838 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 WNK4Q96J92 1243 aa13.51□□□□□ -0.25
CCDC66-206ENST00000434467 VCAM1P19320 739 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 MAP3K9P80192 1104 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 SYDE2Q5VT97 1194 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 NOSTRINQ8IVI9 506 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 ZNF280CQ8ND82 737 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 KIAA1683Q9H0B3 1180 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 MYH7BA7E2Y1 1941 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 SMARCA1P28370 1054 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 NAPAP54920 295 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 GNL2Q13823 731 aaKnown RBP13.5□□□□□ -0.25
CCDC66-206ENST00000434467 USH1GQ495M9 461 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 SEC63Q9UGP8 760 aaKnown RBP13.5□□□□□ -0.25
CCDC66-206ENST00000434467 AFG3L2Q9Y4W6 797 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 MRVI1Q9Y6F6 885 aa13.5□□□□□ -0.25
CCDC66-206ENST00000434467 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 ZBTB5O15062 677 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 PPP1R12BO60237 982 aaPredicted RBP13.49□□□□□ -0.25
CCDC66-206ENST00000434467 BACE1P56817 501 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 NOL9Q5SY16 702 aaKnown RBP13.49□□□□□ -0.25
CCDC66-206ENST00000434467 LEO1Q8WVC0 666 aaPredicted RBP13.49□□□□□ -0.25
CCDC66-206ENST00000434467 HOOK2Q96ED9 719 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 TMEM260Q9NX78 707 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 M0R2N6 131 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 PEX10O60683 326 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 KRT2P35908 639 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 STAT2P52630 851 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 KRT85P78386 507 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 CCDC174Q6PII3 467 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 BTNL9Q6UXG8 535 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 OTUD5Q96G74 571 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 WDR18Q9BV38 432 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
CCDC66-206ENST00000434467 SMCO2A6NFE2 343 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 UBE2SQ16763 222 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 PIK3AP1Q6ZUJ8 805 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 TANGO6Q9C0B7 1094 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 FOXP1Q9H334 677 aaPredicted RBP13.48□□□□□ -0.25
CCDC66-206ENST00000434467 RPAP3Q9H6T3 665 aaPredicted RBP13.48□□□□□ -0.25
CCDC66-206ENST00000434467 PCDHA6Q9UN73 950 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 PCDHB6Q9Y5E3 794 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 PCDHA8Q9Y5H6 950 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 DDX11L8A8MPP1 907 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 IRF6O14896 467 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 TRAK2O60296 914 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 PDIA4P13667 645 aaKnown RBP13.48□□□□□ -0.25
CCDC66-206ENST00000434467 GJA5P36382 358 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 BRAPQ7Z569 592 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 BLIDQ8IZY5 108 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 SPATA32Q96LK8 384 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 P2RX7Q99572 595 aaKnown RBP13.48□□□□□ -0.25
CCDC66-206ENST00000434467 BIN2Q9UBW5 565 aaPredicted RBP13.48□□□□□ -0.25
CCDC66-206ENST00000434467 SYNPO2Q9UMS6 1093 aa13.48□□□□□ -0.25
CCDC66-206ENST00000434467 OPLAHO14841 1288 aa13.47□□□□□ -0.25
CCDC66-206ENST00000434467 XBP1P17861 261 aa13.47□□□□□ -0.25
CCDC66-206ENST00000434467 IREB2P48200 963 aaKnown RBP13.47□□□□□ -0.25
CCDC66-206ENST00000434467 SAFBQ15424 915 aaKnown RBP eCLIP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms