RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 MMP19Q99542 508 aa26.21■■□□□ 1.79
SEMA3B-205ENST00000434030 DIAPH3Q9NSV4 1193 aa26.21■■□□□ 1.79
SEMA3B-205ENST00000434030 HIP1O00291 1037 aa26.2■■□□□ 1.78
SEMA3B-205ENST00000434030 ZBED4O75132 1171 aa26.2■■□□□ 1.78
SEMA3B-205ENST00000434030 COPB2P35606 906 aa26.2■■□□□ 1.78
SEMA3B-205ENST00000434030 NOVP48745 357 aa26.2■■□□□ 1.78
SEMA3B-205ENST00000434030 HAND2P61296 217 aa26.2■■□□□ 1.78
SEMA3B-205ENST00000434030 TRPV1Q8NER1 839 aa26.2■■□□□ 1.78
SEMA3B-205ENST00000434030 TEX13BQ9BXU2 312 aa26.2■■□□□ 1.78
SEMA3B-205ENST00000434030 NBPF3Q9H094 633 aa26.2■■□□□ 1.78
SEMA3B-205ENST00000434030 TOMM22Q9NS69 142 aa26.2■■□□□ 1.78
SEMA3B-205ENST00000434030 ATP2A1O14983 1001 aa26.19■■□□□ 1.78
SEMA3B-205ENST00000434030 RRP12Q5JTH9 1297 aaKnown RBP26.19■■□□□ 1.78
SEMA3B-205ENST00000434030 SNRNP48Q6IEG0 339 aaKnown RBP26.19■■□□□ 1.78
SEMA3B-205ENST00000434030 GMCL1Q96IK5 515 aa26.19■■□□□ 1.78
SEMA3B-205ENST00000434030 MAML3Q96JK9 1138 aa26.19■■□□□ 1.78
SEMA3B-205ENST00000434030 SLC38A10Q9HBR0 1119 aa26.19■■□□□ 1.78
SEMA3B-205ENST00000434030 RIPK3Q9Y572 518 aa26.19■■□□□ 1.78
SEMA3B-205ENST00000434030 TMEM232C9JQI7 657 aa26.18■■□□□ 1.78
SEMA3B-205ENST00000434030 CYBAP13498 195 aa26.18■■□□□ 1.78
SEMA3B-205ENST00000434030 MCCP23508 829 aa26.18■■□□□ 1.78
SEMA3B-205ENST00000434030 CNGA1P29973 690 aa26.18■■□□□ 1.78
SEMA3B-205ENST00000434030 KCTD2Q14681 263 aa26.18■■□□□ 1.78
SEMA3B-205ENST00000434030 CPXCR1Q8N123 301 aa26.18■■□□□ 1.78
SEMA3B-205ENST00000434030 CHMP4CQ96CF2 233 aa26.18■■□□□ 1.78
SEMA3B-205ENST00000434030 DDX20Q9UHI6 824 aaKnown RBP26.18■■□□□ 1.78
SEMA3B-205ENST00000434030 CTDP1Q9Y5B0 961 aaPredicted RBP26.18■■□□□ 1.78
SEMA3B-205ENST00000434030 PGK2P07205 417 aa26.17■■□□□ 1.78
SEMA3B-205ENST00000434030 SLC1A4P43007 532 aa26.17■■□□□ 1.78
SEMA3B-205ENST00000434030 AKNAD1Q5T1N1 836 aa26.17■■□□□ 1.78
SEMA3B-205ENST00000434030 C11orf49Q9H6J7 331 aa26.17■■□□□ 1.78
SEMA3B-205ENST00000434030 RAVER2Q9HCJ3 691 aaKnown RBP26.17■■□□□ 1.78
SEMA3B-205ENST00000434030 EVI5O60447 810 aa26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 STAT2P52630 851 aa26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 TTC22Q5TAA0 569 aa26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 MFSD6Q6ZSS7 791 aa26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 CHURC1Q8WUH1 139 aa26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 STAG1Q8WVM7 1258 aa26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 TCP11L1Q9NUJ3 509 aa26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 ISY1Q9ULR0 285 aaKnown RBP26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 DIS3Q9Y2L1 958 aaKnown RBP26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 NR2E3Q9Y5X4 410 aa26.16■■□□□ 1.78
SEMA3B-205ENST00000434030 MCM3APO60318 1980 aa26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 MSCO60682 206 aa26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 FDX1P10109 184 aa26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 PCP11498 1178 aaKnown RBP26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 GSPT1P15170 499 aaKnown RBP26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 SLC4A3P48751 1232 aa26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 ZNF792Q3KQV3 632 aa26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 RCSD1Q6JBY9 416 aa26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 FAM160B2Q86V87 743 aa26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 TBC1D10CQ8IV04 446 aa26.15■■□□□ 1.78
SEMA3B-205ENST00000434030 ZNF213O14771 459 aa26.14■■□□□ 1.78
SEMA3B-205ENST00000434030 PLA2G6O60733 806 aa26.14■■□□□ 1.78
SEMA3B-205ENST00000434030 OAZ1P54368 228 aa26.14■■□□□ 1.78
SEMA3B-205ENST00000434030 PRAMEF19Q5SWL8 479 aa26.14■■□□□ 1.78
SEMA3B-205ENST00000434030 KCTD1Q719H9 257 aa26.14■■□□□ 1.78
SEMA3B-205ENST00000434030 PFASO15067 1338 aa26.14■■□□□ 1.77
SEMA3B-205ENST00000434030 IKQ13123 557 aaPredicted RBP26.13■■□□□ 1.77
SEMA3B-205ENST00000434030 HABP4Q5JVS0 413 aaKnown RBP26.13■■□□□ 1.77
SEMA3B-205ENST00000434030 RASGRP2Q7LDG7 609 aa26.13■■□□□ 1.77
SEMA3B-205ENST00000434030 TMEM47Q9BQJ4 181 aa26.13■■□□□ 1.77
SEMA3B-205ENST00000434030 DSCC1Q9BVC3 393 aa26.13■■□□□ 1.77
SEMA3B-205ENST00000434030 RNF41Q9H4P4 317 aaPredicted RBP26.13■■□□□ 1.77
SEMA3B-205ENST00000434030 COLQQ9Y215 455 aaPredicted RBP26.13■■□□□ 1.77
SEMA3B-205ENST00000434030 MTMR7Q9Y216 660 aa26.13■■□□□ 1.77
SEMA3B-205ENST00000434030 TOP1P11387 765 aaKnown RBP26.12■■□□□ 1.77
SEMA3B-205ENST00000434030 COL6A1P12109 1028 aa26.12■■□□□ 1.77
SEMA3B-205ENST00000434030 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.12■■□□□ 1.77
SEMA3B-205ENST00000434030 TINF2Q9BSI4 451 aa26.12■■□□□ 1.77
SEMA3B-205ENST00000434030 SEPT4O43236 478 aa26.11■■□□□ 1.77
SEMA3B-205ENST00000434030 DCAF4Q8WV16 495 aa26.11■■□□□ 1.77
SEMA3B-205ENST00000434030 DDX11Q96FC9 970 aa26.11■■□□□ 1.77
SEMA3B-205ENST00000434030 IL25Q9H293 177 aa26.11■■□□□ 1.77
SEMA3B-205ENST00000434030 NEDD4P46934 1319 aa26.11■■□□□ 1.77
SEMA3B-205ENST00000434030 DNAJC25-GNG10A0A024R161 153 aa26.1■■□□□ 1.77
SEMA3B-205ENST00000434030 SLC34A2O95436 690 aa26.1■■□□□ 1.77
SEMA3B-205ENST00000434030 CHST13Q8NET6 341 aa26.1■■□□□ 1.77
SEMA3B-205ENST00000434030 TTC14Q96N46 770 aa26.1■■□□□ 1.77
SEMA3B-205ENST00000434030 FBXO40Q9UH90 709 aa26.1■■□□□ 1.77
SEMA3B-205ENST00000434030 ZNF536O15090 1300 aa26.1■■□□□ 1.77
SEMA3B-205ENST00000434030 ANO1Q5XXA6 986 aa26.09■■□□□ 1.77
SEMA3B-205ENST00000434030 ESR2Q92731 530 aa26.09■■□□□ 1.77
SEMA3B-205ENST00000434030 AGBL1Q96MI9 1066 aa26.09■■□□□ 1.77
SEMA3B-205ENST00000434030 NRBP1Q9UHY1 535 aa26.09■■□□□ 1.77
SEMA3B-205ENST00000434030 PRR12Q9ULL5 1215 aa26.09■■□□□ 1.77
SEMA3B-205ENST00000434030 CCDC96Q2M329 555 aa26.08■■□□□ 1.77
SEMA3B-205ENST00000434030 CHRDL2Q6WN34 429 aa26.08■■□□□ 1.77
SEMA3B-205ENST00000434030 SNAP25P60880 206 aa26.07■■□□□ 1.76
SEMA3B-205ENST00000434030 IMMTQ16891 758 aaKnown RBP26.07■■□□□ 1.76
SEMA3B-205ENST00000434030 TTBK2Q6IQ55 1244 aa26.07■■□□□ 1.76
SEMA3B-205ENST00000434030 C7orf61Q8IZ16 206 aa26.07■■□□□ 1.76
SEMA3B-205ENST00000434030 ANKRD35Q8N283 1001 aa26.07■■□□□ 1.76
SEMA3B-205ENST00000434030 MSL3Q8N5Y2 521 aaKnown RBP26.07■■□□□ 1.76
SEMA3B-205ENST00000434030 HOMER2Q9NSB8 354 aa26.07■■□□□ 1.76
SEMA3B-205ENST00000434030 CTNNA3Q9UI47 895 aa26.07■■□□□ 1.76
SEMA3B-205ENST00000434030 DNM1LO00429 736 aa26.06■■□□□ 1.76
SEMA3B-205ENST00000434030 TAL1P17542 331 aaPredicted RBP26.06■■□□□ 1.76
SEMA3B-205ENST00000434030 BTNL9Q6UXG8 535 aa26.06■■□□□ 1.76
SEMA3B-205ENST00000434030 ARRDC4Q8NCT1 418 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms