RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 IKQ13123 557 aaPredicted RBP30.62■■■□□ 2.49
TMEM248-205ENST00000433271 PFKFB3Q16875 520 aaPredicted RBP30.62■■■□□ 2.49
TMEM248-205ENST00000433271 SYDE2Q5VT97 1194 aa30.62■■■□□ 2.49
TMEM248-205ENST00000433271 RGS22Q8NE09 1264 aa30.62■■■□□ 2.49
TMEM248-205ENST00000433271 PIBF1Q8WXW3 757 aa30.62■■■□□ 2.49
TMEM248-205ENST00000433271 SCG2P13521 617 aa30.61■■■□□ 2.49
TMEM248-205ENST00000433271 FAM160B2Q86V87 743 aa30.61■■■□□ 2.49
TMEM248-205ENST00000433271 MTMR8Q96EF0 704 aa30.61■■■□□ 2.49
TMEM248-205ENST00000433271 C8orf76Q96K31 380 aa30.61■■■□□ 2.49
TMEM248-205ENST00000433271 AIFM3Q96NN9 605 aa30.61■■■□□ 2.49
TMEM248-205ENST00000433271 SEC63Q9UGP8 760 aaKnown RBP30.61■■■□□ 2.49
TMEM248-205ENST00000433271 A0A0G2JLL6 359 aaPredicted RBP30.6■■■□□ 2.49
TMEM248-205ENST00000433271 PKP1Q13835 747 aa30.6■■■□□ 2.49
TMEM248-205ENST00000433271 PRRT2Q7Z6L0 340 aaPredicted RBP30.6■■■□□ 2.49
TMEM248-205ENST00000433271 PIGSQ96S52 555 aa30.6■■■□□ 2.49
TMEM248-205ENST00000433271 RPAP3Q9H6T3 665 aaPredicted RBP30.59■■■□□ 2.49
TMEM248-205ENST00000433271 MYH6P13533 1939 aa30.59■■■□□ 2.49
TMEM248-205ENST00000433271 H3BQV1 296 aa30.58■■■□□ 2.49
TMEM248-205ENST00000433271 HUNKP57058 714 aa30.58■■■□□ 2.49
TMEM248-205ENST00000433271 FSTL1Q12841 308 aa30.58■■■□□ 2.49
TMEM248-205ENST00000433271 IFFO2Q5TF58 517 aa30.58■■■□□ 2.49
TMEM248-205ENST00000433271 HOMER1Q86YM7 354 aa30.58■■■□□ 2.49
TMEM248-205ENST00000433271 FBXO18Q8NFZ0 1043 aa30.58■■■□□ 2.49
TMEM248-205ENST00000433271 PRR12Q9ULL5 1215 aa30.58■■■□□ 2.49
TMEM248-205ENST00000433271 WDR33Q9C0J8 1336 aaKnown RBP30.58■■■□□ 2.49
TMEM248-205ENST00000433271 GJA5P36382 358 aa30.58■■■□□ 2.49
TMEM248-205ENST00000433271 TANGO6Q9C0B7 1094 aa30.58■■■□□ 2.49
TMEM248-205ENST00000433271 PNMA6FA0A0J9YX94 578 aa30.57■■■□□ 2.48
TMEM248-205ENST00000433271 TRIM29Q14134 588 aa30.57■■■□□ 2.48
TMEM248-205ENST00000433271 PROCA1Q8NCQ7 364 aaPredicted RBP30.57■■■□□ 2.48
TMEM248-205ENST00000433271 WNK4Q96J92 1243 aa30.57■■■□□ 2.48
TMEM248-205ENST00000433271 MTMR6Q9Y217 621 aa30.57■■■□□ 2.48
TMEM248-205ENST00000433271 PTPRFP10586 1907 aa30.57■■■□□ 2.48
TMEM248-205ENST00000433271 ZBTB5O15062 677 aa30.56■■■□□ 2.48
TMEM248-205ENST00000433271 BRD1O95696 1058 aa30.56■■■□□ 2.48
TMEM248-205ENST00000433271 XBP1P17861 261 aa30.56■■■□□ 2.48
TMEM248-205ENST00000433271 SAPCD2Q86UD0 394 aa30.56■■■□□ 2.48
TMEM248-205ENST00000433271 PRPF38AQ8NAV1 312 aaKnown RBP30.56■■■□□ 2.48
TMEM248-205ENST00000433271 GJB4Q9NTQ9 266 aa30.56■■■□□ 2.48
TMEM248-205ENST00000433271 FBXO28Q9NVF7 368 aa30.56■■■□□ 2.48
TMEM248-205ENST00000433271 ZDHHC9Q9Y397 364 aa30.56■■■□□ 2.48
TMEM248-205ENST00000433271 VPS37CA5D8V6 355 aaPredicted RBP30.55■■■□□ 2.48
TMEM248-205ENST00000433271 FOSBP53539 338 aa30.55■■■□□ 2.48
TMEM248-205ENST00000433271 SNAPC2Q13487 334 aa30.55■■■□□ 2.48
TMEM248-205ENST00000433271 KIFC2Q96AC6 838 aa30.55■■■□□ 2.48
TMEM248-205ENST00000433271 SLF1Q9BQI6 1058 aa30.55■■■□□ 2.48
TMEM248-205ENST00000433271 SH3GLB2Q9NR46 395 aa30.55■■■□□ 2.48
TMEM248-205ENST00000433271 FLOT1O75955 427 aa30.54■■■□□ 2.48
TMEM248-205ENST00000433271 ZSCAN22P10073 491 aaPredicted RBP30.54■■■□□ 2.48
TMEM248-205ENST00000433271 CDC37Q16543 378 aaPredicted RBP30.54■■■□□ 2.48
TMEM248-205ENST00000433271 KRT40Q6A162 431 aa30.54■■■□□ 2.48
TMEM248-205ENST00000433271 OTUD7BQ6GQQ9 843 aa30.54■■■□□ 2.48
TMEM248-205ENST00000433271 CATSPERGQ6ZRH7 1159 aa30.54■■■□□ 2.48
TMEM248-205ENST00000433271 FASTKD5Q7L8L6 764 aaKnown RBP30.54■■■□□ 2.48
TMEM248-205ENST00000433271 BARHL2Q9NY43 387 aa30.54■■■□□ 2.48
TMEM248-205ENST00000433271 USP17L15C9J2P7 530 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 USP17L13C9JLJ4 530 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 USP17L11C9JVI0 530 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 USP17L18D6R9N7 530 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 USP17L22D6RA61 530 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 USP17L17D6RBQ6 530 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 USP17L19D6RCP7 530 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 USP17L20D6RJB6 530 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 hCG_1984214I3L0E3 225 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 ZBTB48P10074 688 aaPredicted RBP30.53■■■□□ 2.48
TMEM248-205ENST00000433271 GUCY1B3Q02153 619 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 USP17L24Q0WX57 530 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 SPRYD7Q5W111 196 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 WWC2Q6AWC2 1192 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 GADL1Q6ZQY3 521 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 HEATR3Q7Z4Q2 680 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 FAM177A1Q8N128 213 aaPredicted RBP30.53■■■□□ 2.48
TMEM248-205ENST00000433271 ZNF713Q8N859 430 aaPredicted RBP30.53■■■□□ 2.48
TMEM248-205ENST00000433271 VPS54Q9P1Q0 977 aa30.53■■■□□ 2.48
TMEM248-205ENST00000433271 QRICH1Q2TAL8 776 aa30.52■■■□□ 2.48
TMEM248-205ENST00000433271 GPKOWQ92917 476 aaPredicted RBP eCLIP30.52■■■□□ 2.48
TMEM248-205ENST00000433271 RANBP17Q9H2T7 1088 aaKnown RBP30.52■■■□□ 2.48
TMEM248-205ENST00000433271 PPP1R9AQ9ULJ8 1098 aa30.52■■■□□ 2.48
TMEM248-205ENST00000433271 TLL2Q9Y6L7 1015 aa30.52■■■□□ 2.48
TMEM248-205ENST00000433271 GTF2A2P52657 109 aa30.51■■■□□ 2.48
TMEM248-205ENST00000433271 SHISA4Q96DD7 197 aa30.51■■■□□ 2.48
TMEM248-205ENST00000433271 LOC285556D6RIA3 1793 aa30.51■■■□□ 2.47
TMEM248-205ENST00000433271 TMEM88BA6NKF7 163 aa30.51■■■□□ 2.47
TMEM248-205ENST00000433271 STXBP3O00186 592 aa30.51■■■□□ 2.47
TMEM248-205ENST00000433271 PPP1R11O60927 126 aaPredicted RBP30.51■■■□□ 2.47
TMEM248-205ENST00000433271 HOXA7P31268 230 aaPredicted RBP30.51■■■□□ 2.47
TMEM248-205ENST00000433271 MOGSQ13724 837 aa30.51■■■□□ 2.47
TMEM248-205ENST00000433271 COG2Q14746 738 aa30.51■■■□□ 2.47
TMEM248-205ENST00000433271 TREML2Q5T2D2 321 aa30.51■■■□□ 2.47
TMEM248-205ENST00000433271 MS4A4AQ96JQ5 239 aa30.5■■■□□ 2.47
TMEM248-205ENST00000433271 PHF20Q9BVI0 1012 aa30.5■■■□□ 2.47
TMEM248-205ENST00000433271 KCNJ14Q9UNX9 436 aa30.5■■■□□ 2.47
TMEM248-205ENST00000433271 AGTPBP1Q9UPW5 1226 aa30.5■■■□□ 2.47
TMEM248-205ENST00000433271 MMP1P03956 469 aa30.49■■■□□ 2.47
TMEM248-205ENST00000433271 FDX1P10109 184 aa30.49■■■□□ 2.47
TMEM248-205ENST00000433271 CETPP11597 493 aa30.49■■■□□ 2.47
TMEM248-205ENST00000433271 ZNF157P51786 506 aaPredicted RBP30.49■■■□□ 2.47
TMEM248-205ENST00000433271 SNAP25P60880 206 aa30.49■■■□□ 2.47
TMEM248-205ENST00000433271 FOXD4L5Q5VV16 416 aaPredicted RBP30.49■■■□□ 2.47
TMEM248-205ENST00000433271 RGMBQ6NW40 437 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms