RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 PSMD14O00487 310 aa16.62■□□□□ 0.25
DDX56-205ENST00000433257 TEX33O43247 280 aa16.62■□□□□ 0.25
DDX56-205ENST00000433257 EEF1GP26641 437 aaKnown RBP16.62■□□□□ 0.25
DDX56-205ENST00000433257 AARSP49588 968 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDX56-205ENST00000433257 COPB1P53618 953 aaKnown RBP16.62■□□□□ 0.25
DDX56-205ENST00000433257 ATP2C1P98194 919 aaPredicted RBP16.62■□□□□ 0.25
DDX56-205ENST00000433257 CTDSPL2Q05D32 466 aa16.62■□□□□ 0.25
DDX56-205ENST00000433257 CASP8Q14790 479 aa16.62■□□□□ 0.25
DDX56-205ENST00000433257 ZNF658Q5TYW1 1059 aaPredicted RBP16.62■□□□□ 0.25
DDX56-205ENST00000433257 RETREG2Q8NC44 543 aa16.62■□□□□ 0.25
DDX56-205ENST00000433257 NUP88Q99567 741 aaPredicted RBP16.62■□□□□ 0.25
DDX56-205ENST00000433257 NUP58Q9BVL2 599 aa16.62■□□□□ 0.25
DDX56-205ENST00000433257 NYXQ9GZU5 481 aa16.62■□□□□ 0.25
DDX56-205ENST00000433257 VPS18Q9P253 973 aa16.62■□□□□ 0.25
DDX56-205ENST00000433257 SCN7AQ01118 1682 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 A6NNZ2 444 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 CAPN2P17655 700 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 HOXA7P31268 230 aaPredicted RBP16.61■□□□□ 0.25
DDX56-205ENST00000433257 STIM1Q13586 685 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 MTF1Q14872 753 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 TUBB8Q3ZCM7 444 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 SRLQ86TD4 932 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 CNBD1Q8NA66 436 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 SYMPKQ92797 1274 aaKnown RBP16.61■□□□□ 0.25
DDX56-205ENST00000433257 PDE11AQ9HCR9 933 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 TOMM22Q9NS69 142 aa16.61■□□□□ 0.25
DDX56-205ENST00000433257 ZNHIT6Q9NWK9 470 aaKnown RBP16.61■□□□□ 0.25
DDX56-205ENST00000433257 PUF60Q9UHX1 559 aaKnown RBP16.61■□□□□ 0.25
DDX56-205ENST00000433257 ANO9A1A5B4 782 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 H3BQF6 201 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 GUCY1A2P33402 732 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 LONP1P36776 959 aaKnown RBP16.6■□□□□ 0.25
DDX56-205ENST00000433257 GRIN1Q05586 938 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 PPARAQ07869 468 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 MCM6Q14566 821 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 KRT31Q15323 416 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 HSP90AA4PQ58FG1 418 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 TTC38Q5R3I4 469 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 FHDC1Q9C0D6 1143 aaPredicted RBP16.6■□□□□ 0.25
DDX56-205ENST00000433257 EPC1Q9H2F5 836 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 ABCB6Q9NP58 842 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 DENND2AQ9ULE3 1009 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 CD2APQ9Y5K6 639 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 COL24A1Q17RW2 1714 aa16.6■□□□□ 0.25
DDX56-205ENST00000433257 MYO1CO00159 1063 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 IPO7O95373 1038 aaKnown RBP16.59■□□□□ 0.25
DDX56-205ENST00000433257 AFMP43652 599 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 AMPD2Q01433 879 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 NR5A1Q13285 461 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 SEC23AQ15436 765 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 TCP11X2Q5H9J9 407 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 RRAGBQ5VZM2 374 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 KLHL10Q6JEL2 608 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 IQCA1Q86XH1 822 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 OR8K1Q8NGG5 319 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 ARMT1Q9H993 441 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 MAGEF1Q9HAY2 307 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 ZCCHC17Q9NP64 241 aaKnown RBP16.59■□□□□ 0.25
DDX56-205ENST00000433257 TRMT112Q9UI30 125 aaKnown RBP16.59■□□□□ 0.25
DDX56-205ENST00000433257 CTNND2Q9UQB3 1225 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 NUP98P52948 1817 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 KCNJ18B7U540 433 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 KRT86O43790 486 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 CALML3P27482 149 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 CYLC1P35663 651 aaPredicted RBP16.59■□□□□ 0.25
DDX56-205ENST00000433257 TNNT3P45378 269 aaPredicted RBP16.59■□□□□ 0.25
DDX56-205ENST00000433257 KCNJ12Q14500 433 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 RRP12Q5JTH9 1297 aaKnown RBP16.59■□□□□ 0.25
DDX56-205ENST00000433257 SUSD4Q5VX71 490 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 GRAMD1CQ8IYS0 662 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 NUP133Q8WUM0 1156 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 CPLX3Q8WVH0 158 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 CCDC47Q96A33 483 aaKnown RBP16.59■□□□□ 0.25
DDX56-205ENST00000433257 TSGA10Q9BZW7 698 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 THAP9Q9H5L6 903 aa16.59■□□□□ 0.25
DDX56-205ENST00000433257 EPN1Q9Y6I3 576 aaPredicted RBP16.59■□□□□ 0.25
DDX56-205ENST00000433257 A0A0U1RQG5 324 aaPredicted RBP16.58■□□□□ 0.24
DDX56-205ENST00000433257 NDUFA10O95299 355 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 CD44P16070 742 aaKnown RBP16.58■□□□□ 0.24
DDX56-205ENST00000433257 KRT9P35527 623 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 ARHGAP25P42331 645 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 FXR1P51114 621 aaKnown RBP eCLIP16.58■□□□□ 0.24
DDX56-205ENST00000433257 USP14P54578 494 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 KCNB1Q14721 858 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 PRR5LQ6MZQ0 368 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 TRAPPC11Q7Z392 1133 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 FAM114A1Q8IWE2 563 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 CCDC170Q8IYT3 715 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 CCDC102AQ96A19 550 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 PNKPQ96T60 521 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 SYT17Q9BSW7 474 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 MAGEC2Q9UBF1 373 aaPredicted RBP16.58■□□□□ 0.24
DDX56-205ENST00000433257 RRP15Q9Y3B9 282 aaKnown RBP16.58■□□□□ 0.24
DDX56-205ENST00000433257 TNKSO95271 1327 aa16.58■□□□□ 0.24
DDX56-205ENST00000433257 E2F4Q16254 413 aa16.57■□□□□ 0.24
DDX56-205ENST00000433257 PAPD7Q5XG87 772 aaKnown RBP16.57■□□□□ 0.24
DDX56-205ENST00000433257 WWC2Q6AWC2 1192 aa16.57■□□□□ 0.24
DDX56-205ENST00000433257 CCDC85AQ96PX6 553 aaPredicted RBP16.57■□□□□ 0.24
DDX56-205ENST00000433257 ZSCAN10Q96SZ4 725 aaPredicted RBP16.57■□□□□ 0.24
DDX56-205ENST00000433257 DNAJC7Q99615 494 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms