RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 ATP2A1O14983 1001 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 TNKSO95271 1327 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 PTPREP23469 700 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 RGS2P41220 211 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 UBXN2AP68543 259 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 CCDC96Q2M329 555 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 RNF20Q5VTR2 975 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 NCAPG2Q86XI2 1143 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 RIOX2Q8IUF8 465 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 TRMT44Q8IYL2 757 aaKnown RBP20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 ENAHQ8N8S7 591 aaPredicted RBP20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 REPS2Q8NFH8 660 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 TEX13BQ9BXU2 312 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 SLC38A10Q9HBR0 1119 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 ZNF214Q9UL59 606 aaPredicted RBP20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 MTMR7Q9Y216 660 aa20.4■□□□□ 0.86
CTDSP1-203ENST00000431127 PDHBP11177 359 aa20.39■□□□□ 0.85
CTDSP1-203ENST00000431127 OAZ1P54368 228 aa20.39■□□□□ 0.85
CTDSP1-203ENST00000431127 MAP2K5Q13163 448 aa20.39■□□□□ 0.85
CTDSP1-203ENST00000431127 SART3Q15020 963 aaKnown RBP20.39■□□□□ 0.85
CTDSP1-203ENST00000431127 NECTIN1Q15223 517 aa20.39■□□□□ 0.85
CTDSP1-203ENST00000431127 KCTD1Q719H9 257 aa20.39■□□□□ 0.85
CTDSP1-203ENST00000431127 ABRAQ8N0Z2 381 aa20.39■□□□□ 0.85
CTDSP1-203ENST00000431127 USP6NLQ92738 828 aa20.39■□□□□ 0.85
CTDSP1-203ENST00000431127 DOCK3Q8IZD9 2030 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 CENPFP49454 3210 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 ERICH2A1L162 156 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 SLC27A2O14975 620 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 CYP2B6P20813 491 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 GRB14Q14449 540 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 IFIT1BQ5T764 474 aaKnown RBP20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 CREB3L3Q68CJ9 461 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 PNMA1Q8ND90 353 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 CHMP4CQ96CF2 233 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 APBA2Q99767 749 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 TMEM106CQ9BVX2 250 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 PARP14Q460N5 1801 aa20.38■□□□□ 0.85
CTDSP1-203ENST00000431127 HMGCRP04035 888 aa20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 SNHG28P0DPA3 235 aa20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 FCER1AP12319 257 aa20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 ELNP15502 786 aa20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 GPATCH4Q5T3I0 446 aaKnown RBP20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 BTNL9Q6UXG8 535 aa20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 STOX1Q6ZVD7 989 aa20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 CYB5R4Q7L1T6 521 aa20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 SLC5A4Q9NY91 659 aa20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 TAF6LQ9Y6J9 622 aa20.37■□□□□ 0.85
CTDSP1-203ENST00000431127 IFIT3O14879 490 aaKnown RBP20.36■□□□□ 0.85
CTDSP1-203ENST00000431127 REC8O95072 547 aa20.36■□□□□ 0.85
CTDSP1-203ENST00000431127 EN2P19622 333 aaPredicted RBP20.36■□□□□ 0.85
CTDSP1-203ENST00000431127 ZNF543Q08ER8 600 aa20.36■□□□□ 0.85
CTDSP1-203ENST00000431127 SNRNP48Q6IEG0 339 aaKnown RBP20.36■□□□□ 0.85
CTDSP1-203ENST00000431127 CPXCR1Q8N123 301 aa20.36■□□□□ 0.85
CTDSP1-203ENST00000431127 PRR12Q9ULL5 1215 aa20.36■□□□□ 0.85
CTDSP1-203ENST00000431127 KIAA0100Q14667 2235 aaKnown RBP20.36■□□□□ 0.85
CTDSP1-203ENST00000431127 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 INHAP05111 366 aa20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 HOXC6P09630 235 aa20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 ZKSCAN1P17029 563 aaPredicted RBP20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 ADORA2AP29274 412 aa20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 SEC23AQ15436 765 aa20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 RASGRP2Q7LDG7 609 aa20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 DPP9Q86TI2 863 aa20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 MTA3Q9BTC8 594 aa20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 RAVER2Q9HCJ3 691 aaKnown RBP20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 GPCPD1Q9NPB8 672 aa20.35■□□□□ 0.85
CTDSP1-203ENST00000431127 KCTD2Q14681 263 aa20.34■□□□□ 0.85
CTDSP1-203ENST00000431127 SYDE2Q5VT97 1194 aa20.34■□□□□ 0.85
CTDSP1-203ENST00000431127 TTBK2Q6IQ55 1244 aa20.34■□□□□ 0.85
CTDSP1-203ENST00000431127 MB21D2Q8IYB1 491 aaPredicted RBP20.34■□□□□ 0.85
CTDSP1-203ENST00000431127 MMP19Q99542 508 aa20.34■□□□□ 0.85
CTDSP1-203ENST00000431127 FBXO40Q9UH90 709 aa20.34■□□□□ 0.85
CTDSP1-203ENST00000431127 MYCP01106 439 aaPredicted RBP20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 CCL5P13501 91 aa20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 MCM5P33992 734 aa20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 SLC16A2P36021 539 aa20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 WTAPQ15007 396 aa20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 ASPRV1Q53RT3 343 aa20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 TMEM67Q5HYA8 995 aa20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 CHST13Q8NET6 341 aa20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 TRIB2Q92519 343 aa20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 PNMA2Q9UL42 364 aa20.33■□□□□ 0.85
CTDSP1-203ENST00000431127 PARP1P09874 1014 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 KRT32Q14532 448 aa20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 MTFR1Q15390 333 aa20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 TKFCQ3LXA3 575 aa20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 TSGA10IPQ3SY00 556 aa20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 RNF208Q9H0X6 261 aa20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 RANBP17Q9H2T7 1088 aaKnown RBP20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 PLXNB2O15031 1838 aa20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 COL11A1P12107 1806 aaPredicted RBP20.32■□□□□ 0.84
CTDSP1-203ENST00000431127 MKI67P46013 3256 aaKnown RBP20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 EPB41L2O43491 1005 aaKnown RBP20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 PRC1O43663 620 aa20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 ANTXR2P58335 489 aa20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 MFSD14CQ5VZR4 134 aa20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 CHST3Q7LGC8 479 aa20.31■□□□□ 0.84
CTDSP1-203ENST00000431127 TMTC2Q8N394 836 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms