RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 Q3C1V9 767 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 CERKLQ49MI3 558 aaPredicted RBP9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 C9orf50Q5SZB4 431 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 OLFML2BQ68BL8 750 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 NCAPG2Q86XI2 1143 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 PPM1EQ8WY54 764 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 SH2D4AQ9H788 454 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 PDLIM7Q9NR12 457 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 AAASQ9NRG9 546 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 SNRKQ9NRH2 765 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 DACH1Q9UI36 760 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 SERPINB13Q9UIV8 391 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 FOCADQ5VW36 1801 aa9.54□□□□□ -0.88
ECHDC1-207ENST00000430841 DNAH12Q6ZR08 3092 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 MYH1P12882 1939 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 DCDC2CA8MYV0 355 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 IGSF3O75054 1194 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 IDH1O75874 414 aaKnown RBP9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 POLR3DP05423 398 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 CYBAP13498 195 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 CYP7A1P22680 504 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 DNAJB2P25686 324 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 MLLT3P42568 568 aaPredicted RBP9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 MCAMP43121 646 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 RRP1BQ14684 758 aaKnown RBP9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 CATSPERGQ6ZRH7 1159 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 MB21D1Q8N884 522 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 FAM122AQ96E09 287 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 C12orf42Q96LP6 360 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 MEIS3Q99687 375 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 KIAA1683Q9H0B3 1180 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 MTIF3Q9H2K0 278 aaKnown RBP9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 XPNPEP3Q9NQH7 507 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 TMEM39AQ9NV64 488 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 HOXC10Q9NYD6 342 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 FLRT1Q9NZU1 646 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 THEGQ9P2T0 379 aa9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 NOB1Q9ULX3 412 aaKnown RBP9.53□□□□□ -0.88
ECHDC1-207ENST00000430841 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 SIPA1L1O43166 1804 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 ZNF236Q9UL36 1845 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 GNAI2P04899 355 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 CT47B1P0C2W7 299 aaPredicted RBP9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 FCER1AP12319 257 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 SWT1Q5T5J6 900 aaKnown RBP9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 ZNF598Q86UK7 904 aaKnown RBP9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 AMOTL1Q8IY63 956 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 NUP133Q8WUM0 1156 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 VTI1AQ96AJ9 217 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 TIFAQ96CG3 184 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 DDRGK1Q96HY6 314 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 MROH8Q9H579 483 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 ARHGEF10LQ9HCE6 1279 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 CNPY2Q9Y2B0 182 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 CTDP1Q9Y5B0 961 aaPredicted RBP9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 RLFQ13129 1914 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 MROH7Q68CQ1 1323 aa9.52□□□□□ -0.89
ECHDC1-207ENST00000430841 CDK5RAP2Q96SN8 1893 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 IPO8O15397 1037 aaKnown RBP9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 RAD21O60216 631 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 RNF40O75150 1001 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 FLOT1O75955 427 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 ERCC3P19447 782 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 TLE2Q04725 743 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 MAP3K12Q12852 859 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 PPIGQ13427 754 aaKnown RBP eCLIP9.51□□□□□ -0.898e-6■■■■□ 22.7
ECHDC1-207ENST00000430841 KCTD2Q14681 263 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 COG2Q14746 738 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 LRRC41Q15345 812 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 LBX2Q6XYB7 198 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 MIGA1Q8NAN2 632 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 TTC13Q8NBP0 860 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 SHCBP1Q8NEM2 672 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 NPLOC4Q8TAT6 608 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 ZNF384Q8TF68 577 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 SPATC1LQ9H0A9 340 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 EHD4Q9H223 541 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 TTYH1Q9H313 450 aaPredicted RBP9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 DNAJC18Q9H819 358 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 SPC25Q9HBM1 224 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 MSRAQ9UJ68 235 aa9.51□□□□□ -0.89
ECHDC1-207ENST00000430841 TLL1O43897 1013 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 CNMDO75829 334 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 IGFBP4P22692 258 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 SHROOM1Q2M3G4 852 aaPredicted RBP9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 FAM47AQ5JRC9 791 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 SLC44A5Q8NCS7 719 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 ATXN2LQ8WWM7 1075 aaKnown RBP9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 UHRF1Q96T88 793 aaPredicted RBP9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 MMP19Q99542 508 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 MOV10L1Q9BXT6 1211 aaKnown RBP9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 CRNKL1Q9BZJ0 848 aaKnown RBP9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 ZNF576Q9H609 170 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 STARD7Q9NQZ5 370 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 BTBD7Q9P203 1132 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 NRBP1Q9UHY1 535 aa9.5□□□□□ -0.89
ECHDC1-207ENST00000430841 NAV1Q8NEY1 1877 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms