RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MTMR4Q9NYA4 1195 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 CLIP2Q9UDT6 1046 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 PHF24Q9UPV7 400 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 DNAH12Q6ZR08 3092 aa17.74■□□□□ 0.43
MSH5-208ENST00000429846 SLC3A2P08195 630 aaKnown RBP17.74■□□□□ 0.43
MSH5-208ENST00000429846 ADCYAP1R1P41586 468 aa17.74■□□□□ 0.43
MSH5-208ENST00000429846 OAZ1P54368 228 aa17.74■□□□□ 0.43
MSH5-208ENST00000429846 FSD1Q9BTV5 496 aa17.74■□□□□ 0.43
MSH5-208ENST00000429846 FEM1BQ9UK73 627 aa17.74■□□□□ 0.43
MSH5-208ENST00000429846 CTDP1Q9Y5B0 961 aaPredicted RBP17.74■□□□□ 0.43
MSH5-208ENST00000429846 ZBED4O75132 1171 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 PRDM1O75626 825 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 ZNF865P0CJ78 1059 aaPredicted RBP17.73■□□□□ 0.43
MSH5-208ENST00000429846 TSPY3P0CV98 308 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 TSPY8P0CW00 308 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 FDX1P10109 184 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 MX1P20591 662 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 TRIM60Q495X7 471 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 PPP4R3BQ5MIZ7 849 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 MAMDC4Q6UXC1 1216 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 SLC17A8Q8NDX2 589 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 NEDD1Q8NHV4 660 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 DDX11Q96FC9 970 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 NAPBQ9H115 298 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 SLC38A10Q9HBR0 1119 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 FBXO40Q9UH90 709 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 STXBP5LQ9Y2K9 1186 aa17.73■□□□□ 0.43
MSH5-208ENST00000429846 DNAJC25-GNG10A0A024R161 153 aa17.72■□□□□ 0.43
MSH5-208ENST00000429846 ZMYM1Q5SVZ6 1142 aa17.72■□□□□ 0.43
MSH5-208ENST00000429846 FAM109BQ6ICB4 259 aaPredicted RBP17.72■□□□□ 0.43
MSH5-208ENST00000429846 Q7L0L9 218 aa17.72■□□□□ 0.43
MSH5-208ENST00000429846 ZNF467Q7Z7K2 595 aaPredicted RBP17.72■□□□□ 0.43
MSH5-208ENST00000429846 KIFC2Q96AC6 838 aa17.72■□□□□ 0.43
MSH5-208ENST00000429846 PRDM5Q9NQX1 630 aaPredicted RBP17.72■□□□□ 0.43
MSH5-208ENST00000429846 PDLIM7Q9NR12 457 aa17.72■□□□□ 0.43
MSH5-208ENST00000429846 MTMR10Q9NXD2 777 aa17.72■□□□□ 0.43
MSH5-208ENST00000429846 PCDHB15Q9Y5E8 787 aa17.72■□□□□ 0.43
MSH5-208ENST00000429846 PPARAQ07869 468 aa17.71■□□□□ 0.43
MSH5-208ENST00000429846 CPXCR1Q8N123 301 aa17.71■□□□□ 0.43
MSH5-208ENST00000429846 LRRC47Q8N1G4 583 aaKnown RBP17.71■□□□□ 0.43
MSH5-208ENST00000429846 CHST13Q8NET6 341 aa17.71■□□□□ 0.43
MSH5-208ENST00000429846 FERMT2Q96AC1 680 aa17.71■□□□□ 0.43
MSH5-208ENST00000429846 TSEN34Q9BSV6 310 aaKnown RBP17.71■□□□□ 0.43
MSH5-208ENST00000429846 RIPK3Q9Y572 518 aa17.71■□□□□ 0.43
MSH5-208ENST00000429846 MCM3APO60318 1980 aa17.7■□□□□ 0.42
MSH5-208ENST00000429846 A0A1W2PQ45 241 aaPredicted RBP17.7■□□□□ 0.42
MSH5-208ENST00000429846 A0A1W2PQY0 241 aa17.7■□□□□ 0.42
MSH5-208ENST00000429846 ADAMTS4O75173 837 aa17.7■□□□□ 0.42
MSH5-208ENST00000429846 PGK1P00558 417 aa17.7■□□□□ 0.42
MSH5-208ENST00000429846 BMP3P12645 472 aa17.7■□□□□ 0.42
MSH5-208ENST00000429846 TAL1P17542 331 aaPredicted RBP17.7■□□□□ 0.42
MSH5-208ENST00000429846 STAT2P52630 851 aa17.7■□□□□ 0.42
MSH5-208ENST00000429846 SEC62Q99442 399 aaKnown RBP17.7■□□□□ 0.42
MSH5-208ENST00000429846 ZBTB47Q9UFB7 747 aaPredicted RBP17.7■□□□□ 0.42
MSH5-208ENST00000429846 FAM184BQ9ULE4 1060 aa17.7■□□□□ 0.42
MSH5-208ENST00000429846 TACC3Q9Y6A5 838 aa17.7■□□□□ 0.42
MSH5-208ENST00000429846 SALL3Q9BXA9 1300 aa17.7■□□□□ 0.42
MSH5-208ENST00000429846 MOXD2PA6NHM9 499 aa17.69■□□□□ 0.42
MSH5-208ENST00000429846 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
MSH5-208ENST00000429846 SLFN13Q68D06 897 aa17.69■□□□□ 0.42
MSH5-208ENST00000429846 FAM160B2Q86V87 743 aa17.69■□□□□ 0.42
MSH5-208ENST00000429846 ANKRD35Q8N283 1001 aa17.69■□□□□ 0.42
MSH5-208ENST00000429846 OTUD7AQ8TE49 926 aaPredicted RBP17.69■□□□□ 0.42
MSH5-208ENST00000429846 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
MSH5-208ENST00000429846 GMCL1Q96IK5 515 aa17.69■□□□□ 0.42
MSH5-208ENST00000429846 RAVER2Q9HCJ3 691 aaKnown RBP17.69■□□□□ 0.42
MSH5-208ENST00000429846 ZHX1Q9UKY1 873 aaPredicted RBP17.69■□□□□ 0.42
MSH5-208ENST00000429846 SYNRGQ9UMZ2 1314 aa17.69■□□□□ 0.42
MSH5-208ENST00000429846 SNAI1O95863 264 aaPredicted RBP17.68■□□□□ 0.42
MSH5-208ENST00000429846 CLTBP09497 229 aa17.68■□□□□ 0.42
MSH5-208ENST00000429846 CST5P28325 142 aaPredicted RBP17.68■□□□□ 0.42
MSH5-208ENST00000429846 SLC1A4P43007 532 aa17.68■□□□□ 0.42
MSH5-208ENST00000429846 RRP1P56182 461 aaKnown RBP17.68■□□□□ 0.42
MSH5-208ENST00000429846 TFAP4Q01664 338 aa17.68■□□□□ 0.42
MSH5-208ENST00000429846 TLE2Q04725 743 aa17.68■□□□□ 0.42
MSH5-208ENST00000429846 CHURC1Q8WUH1 139 aa17.68■□□□□ 0.42
MSH5-208ENST00000429846 BADQ92934 168 aa17.68■□□□□ 0.42
MSH5-208ENST00000429846 ABHD16BQ9H3Z7 469 aa17.68■□□□□ 0.42
MSH5-208ENST00000429846 COL6A3P12111 3177 aa17.67■□□□□ 0.42
MSH5-208ENST00000429846 TRIM43BA6NCK2 446 aa17.67■□□□□ 0.42
MSH5-208ENST00000429846 TMEM232C9JQI7 657 aa17.67■□□□□ 0.42
MSH5-208ENST00000429846 DUSP11O75319 330 aaKnown RBP17.67■□□□□ 0.42
MSH5-208ENST00000429846 SLC4A3P48751 1232 aa17.67■□□□□ 0.42
MSH5-208ENST00000429846 TRIM43Q96BQ3 446 aaPredicted RBP17.67■□□□□ 0.42
MSH5-208ENST00000429846 LENG1Q96BZ8 264 aaPredicted RBP17.67■□□□□ 0.42
MSH5-208ENST00000429846 TOX2Q96NM4 488 aa17.67■□□□□ 0.42
MSH5-208ENST00000429846 ACAD9Q9H845 621 aa17.67■□□□□ 0.42
MSH5-208ENST00000429846 STARD7Q9NQZ5 370 aa17.67■□□□□ 0.42
MSH5-208ENST00000429846 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.67■□□□□ 0.42
MSH5-208ENST00000429846 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.67■□□□□ 0.42
MSH5-208ENST00000429846 TSPY2A6NKD2 308 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 PLA2G6O60733 806 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 ACLYP53396 1101 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 ACVR2BQ13705 512 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 SHHQ15465 462 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 TKFCQ3LXA3 575 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 ZNF697Q5TEC3 545 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 ANKRD33Q7Z3H0 272 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 SH3RF1Q7Z6J0 888 aa17.66■□□□□ 0.42
MSH5-208ENST00000429846 TICAM2Q86XR7 235 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms