RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 SYDE2Q5VT97 1194 aa17.64■□□□□ 0.41
VARS2-203ENST00000428017 TTBK2Q6IQ55 1244 aa17.64■□□□□ 0.41
VARS2-203ENST00000428017 RAB11FIP4Q86YS3 637 aa17.64■□□□□ 0.41
VARS2-203ENST00000428017 FANCBQ8NB91 859 aa17.64■□□□□ 0.41
VARS2-203ENST00000428017 ATG4CQ96DT6 458 aa17.64■□□□□ 0.41
VARS2-203ENST00000428017 KIF2CQ99661 725 aa17.64■□□□□ 0.41
VARS2-203ENST00000428017 LZTS2Q9BRK4 669 aa17.64■□□□□ 0.41
VARS2-203ENST00000428017 CFHR5Q9BXR6 569 aa17.64■□□□□ 0.41
VARS2-203ENST00000428017 RBM28Q9NW13 759 aaKnown RBP17.64■□□□□ 0.41
VARS2-203ENST00000428017 MYH4Q9Y623 1939 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 CCDC196A0A1B0GTZ2 297 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 PALM3A6NDB9 673 aaPredicted RBP17.63■□□□□ 0.41
VARS2-203ENST00000428017 KLRF2D3W0D1 207 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 FDX1P10109 184 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 METAP2P50579 478 aaKnown RBP eCLIP17.63■□□□□ 0.41
VARS2-203ENST00000428017 AK2P54819 239 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 RTN1Q16799 776 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 BTNL9Q6UXG8 535 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 LBX2Q6XYB7 198 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 NOL8Q76FK4 1167 aaKnown RBP17.63■□□□□ 0.41
VARS2-203ENST00000428017 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
VARS2-203ENST00000428017 ANKRD13CQ8N6S4 541 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 MAD2L2Q9UI95 211 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 RABGAP1Q9Y3P9 1069 aa17.63■□□□□ 0.41
VARS2-203ENST00000428017 PTPRFP10586 1907 aa17.62■□□□□ 0.41
VARS2-203ENST00000428017 VWA5AO00534 786 aa17.62■□□□□ 0.41
VARS2-203ENST00000428017 HSPA1AP0DMV8 641 aaKnown RBP17.62■□□□□ 0.41
VARS2-203ENST00000428017 HSPA1BP0DMV9 641 aaKnown RBP17.62■□□□□ 0.41
VARS2-203ENST00000428017 PPP2R5BQ15173 497 aa17.62■□□□□ 0.41
VARS2-203ENST00000428017 STAG2Q8N3U4 1231 aa17.62■□□□□ 0.41
VARS2-203ENST00000428017 GPRC5AQ8NFJ5 357 aa17.62■□□□□ 0.41
VARS2-203ENST00000428017 ZNF274Q96GC6 653 aaPredicted RBP17.62■□□□□ 0.41
VARS2-203ENST00000428017 LARP6Q9BRS8 491 aaKnown RBP17.62■□□□□ 0.41
VARS2-203ENST00000428017 UBA5Q9GZZ9 404 aa17.62■□□□□ 0.41
VARS2-203ENST00000428017 TSKSQ9UJT2 592 aa17.62■□□□□ 0.41
VARS2-203ENST00000428017 PRR12Q9ULL5 1215 aa17.62■□□□□ 0.41
VARS2-203ENST00000428017 EVCP57679 992 aa17.61■□□□□ 0.41
VARS2-203ENST00000428017 CCNA1P78396 465 aa17.61■□□□□ 0.41
VARS2-203ENST00000428017 PLS1Q14651 629 aa17.61■□□□□ 0.41
VARS2-203ENST00000428017 FAM110CQ1W6H9 321 aa17.61■□□□□ 0.41
VARS2-203ENST00000428017 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
VARS2-203ENST00000428017 R3HDMLQ9H3Y0 253 aa17.61■□□□□ 0.41
VARS2-203ENST00000428017 VAT1LQ9HCJ6 419 aa17.61■□□□□ 0.41
VARS2-203ENST00000428017 ADGRA2Q96PE1 1338 aa17.61■□□□□ 0.41
VARS2-203ENST00000428017 GPR25O00155 361 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 BCRP11274 1271 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 PDIA3P30101 505 aaKnown RBP17.6■□□□□ 0.41
VARS2-203ENST00000428017 CTCFP49711 727 aaPredicted RBP17.6■□□□□ 0.41
VARS2-203ENST00000428017 STK3Q13188 491 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 KIF22Q14807 665 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 ADGRF4Q8IZF3 695 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 CPXCR1Q8N123 301 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
VARS2-203ENST00000428017 CPVLQ9H3G5 476 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 SLC38A10Q9HBR0 1119 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 CWC22Q9HCG8 908 aaKnown RBP17.6■□□□□ 0.41
VARS2-203ENST00000428017 RBPJLQ9UBG7 517 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 MORF4L1Q9UBU8 362 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 ADAMTS5Q9UNA0 930 aa17.6■□□□□ 0.41
VARS2-203ENST00000428017 CPLX1O14810 134 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 ERVK-9P63128 1117 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 ERVK-24P63145 666 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 CCT2P78371 535 aaKnown RBP17.59■□□□□ 0.41
VARS2-203ENST00000428017 SP3Q02447 781 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 NOM1Q5C9Z4 860 aaKnown RBP17.59■□□□□ 0.41
VARS2-203ENST00000428017 CCDC174Q6PII3 467 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 CPLX2Q6PUV4 134 aaKnown RBP17.59■□□□□ 0.41
VARS2-203ENST00000428017 TMTC3Q6ZXV5 915 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 SPATC1LQ9H0A9 340 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 TXNRD2Q9NNW7 524 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 BTBD7Q9P203 1132 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 PNMA2Q9UL42 364 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 TPCN1Q9ULQ1 816 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 LIMCH1Q9UPQ0 1083 aa17.59■□□□□ 0.41
VARS2-203ENST00000428017 FKTNO75072 461 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 PLEKHA8P1O95397 391 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 SMARCA1P28370 1054 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 STAT3P40763 770 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 OAZ1P54368 228 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 SNAP25P60880 206 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 TMEM132BQ14DG7 1078 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 ARHGEF6Q15052 776 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 CDC37Q16543 378 aaPredicted RBP17.58■□□□□ 0.4
VARS2-203ENST00000428017 HOMER1Q86YM7 354 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 CCDC82Q8N4S0 544 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 RRP36Q96EU6 259 aaKnown RBP17.58■□□□□ 0.4
VARS2-203ENST00000428017 TEX13BQ9BXU2 312 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 RANBP17Q9H2T7 1088 aaKnown RBP17.58■□□□□ 0.4
VARS2-203ENST00000428017 JMJD4Q9H9V9 463 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 RAVER2Q9HCJ3 691 aaKnown RBP17.58■□□□□ 0.4
VARS2-203ENST00000428017 SEC63Q9UGP8 760 aaKnown RBP17.58■□□□□ 0.4
VARS2-203ENST00000428017 HPS5Q9UPZ3 1129 aa17.58■□□□□ 0.4
VARS2-203ENST00000428017 ATP2A1O14983 1001 aa17.57■□□□□ 0.4
VARS2-203ENST00000428017 FOXN1O15353 648 aa17.57■□□□□ 0.4
VARS2-203ENST00000428017 PEX10O60683 326 aa17.57■□□□□ 0.4
VARS2-203ENST00000428017 CNMDO75829 334 aa17.57■□□□□ 0.4
VARS2-203ENST00000428017 COPB2P35606 906 aa17.57■□□□□ 0.4
VARS2-203ENST00000428017 MCM2P49736 904 aa17.57■□□□□ 0.4
VARS2-203ENST00000428017 WDR78Q5VTH9 848 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms