RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 GMCL1P1Q8NEA9 526 aa15.57■□□□□ 0.08
DEPDC7-203ENST00000427755 LBHD1Q9BQE6 289 aaPredicted RBP15.57■□□□□ 0.08
DEPDC7-203ENST00000427755 ZNF287Q9HBT7 754 aa15.57■□□□□ 0.08
DEPDC7-203ENST00000427755 XPNPEP3Q9NQH7 507 aa15.57■□□□□ 0.08
DEPDC7-203ENST00000427755 PHF24Q9UPV7 400 aa15.57■□□□□ 0.08
DEPDC7-203ENST00000427755 TTLL1O95922 423 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 PGK1P00558 417 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 MX1P20591 662 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 LRRC47Q8N1G4 583 aaKnown RBP15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 MSL3Q8N5Y2 521 aaKnown RBP15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 NEDD1Q8NHV4 660 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 FERMT2Q96AC1 680 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 FSD1Q9BTV5 496 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 NACAP1Q9BZK3 213 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 SLC38A10Q9HBR0 1119 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 MTMR10Q9NXD2 777 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 PARP14Q460N5 1801 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 MYH7P12883 1935 aa15.56■□□□□ 0.08
DEPDC7-203ENST00000427755 SYNGAP1Q96PV0 1343 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 SNAI1O95863 264 aaPredicted RBP15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 AKR1A1P14550 325 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 PPARAQ07869 468 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 MAMDC4Q6UXC1 1216 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 CPXCR1Q8N123 301 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 KIFC2Q96AC6 838 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 LENG1Q96BZ8 264 aaPredicted RBP15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 FGD4Q96M96 766 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 RAVER2Q9HCJ3 691 aaKnown RBP15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 PDLIM7Q9NR12 457 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 PRKAG2Q9UGJ0 569 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 FEM1BQ9UK73 627 aa15.55■□□□□ 0.08
DEPDC7-203ENST00000427755 TRIM43BA6NCK2 446 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 ZBED4O75132 1171 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 ADAMTS4O75173 837 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 RRP1P56182 461 aaKnown RBP15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 TFAP4Q01664 338 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 PDE4BQ07343 736 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 SLFN13Q68D06 897 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 CCDC129Q6ZRS4 1044 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 SH3RF1Q7Z6J0 888 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 TRIM43Q96BQ3 446 aaPredicted RBP15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 NAPBQ9H115 298 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 CNPY2Q9Y2B0 182 aa15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.54■□□□□ 0.08
DEPDC7-203ENST00000427755 MYH8P13535 1937 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 POTEB2H3BUK9 544 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 TSPY3P0CV98 308 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 TSPY8P0CW00 308 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 BMP3P12645 472 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 OAZ1P54368 228 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 ZNF467Q7Z7K2 595 aaPredicted RBP15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 RNF180Q86T96 592 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 DDX11Q96FC9 970 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 PRDM5Q9NQX1 630 aaPredicted RBP15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 STXBP5LQ9Y2K9 1186 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 TACC3Q9Y6A5 838 aa15.53■□□□□ 0.08
DEPDC7-203ENST00000427755 A0A1W2PQ45 241 aaPredicted RBP15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 A0A1W2PQY0 241 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 SLC3A2P08195 630 aaKnown RBP15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 ITGB8P26012 769 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 SLC4A3P48751 1232 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 TLE2Q04725 743 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 FAM109BQ6ICB4 259 aaPredicted RBP15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 CCSAPQ6IQ19 270 aaPredicted RBP15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 SLC17A8Q8NDX2 589 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 KLHDC9Q8NEP7 349 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 CHST13Q8NET6 341 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 BADQ92934 168 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 GMCL1Q96IK5 515 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 INCENPQ9NQS7 918 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 IL17RBQ9NRM6 502 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 FAM184BQ9ULE4 1060 aa15.52■□□□□ 0.08
DEPDC7-203ENST00000427755 ZNF536O15090 1300 aa15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 SYNRGQ9UMZ2 1314 aa15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 TMEM232C9JQI7 657 aa15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 SHHQ15465 462 aa15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 C9orf50Q5SZB4 431 aa15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 ANKRD45Q5TZF3 282 aa15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 VPS53Q5VIR6 699 aa15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 CRBNQ96SW2 442 aa15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 TSEN34Q9BSV6 310 aaKnown RBP15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 FBXO40Q9UH90 709 aa15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 ZHX1Q9UKY1 873 aaPredicted RBP15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 CTDP1Q9Y5B0 961 aaPredicted RBP15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 COL11A1P12107 1806 aaPredicted RBP15.51■□□□□ 0.07
DEPDC7-203ENST00000427755 MYADML2A6NDP7 307 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 ADCY6O43306 1168 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 FDX1P10109 184 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 SLC1A4P43007 532 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 NOVP48745 357 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 STAT2P52630 851 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 IRX5P78411 483 aaPredicted RBP15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 CTDSPL2Q05D32 466 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 HDAC1Q13547 482 aaPredicted RBP15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 ACVR2BQ13705 512 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 ANKRD35Q8N283 1001 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 STAG1Q8WVM7 1258 aa15.5■□□□□ 0.07
DEPDC7-203ENST00000427755 EVI5LQ96CN4 794 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms