RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
RTN4-210ENST00000427710 BAZ2BQ9UIF8 2168 aaKnown RBP17.54■□□□□ 0.4
RTN4-210ENST00000427710 FRMPD2Q68DX3 1309 aaPredicted RBP17.53■□□□□ 0.4
RTN4-210ENST00000427710 COBLO75128 1261 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 GJB1P08034 283 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 TOP1P11387 765 aaKnown RBP17.53■□□□□ 0.4
RTN4-210ENST00000427710 XRCC5P13010 732 aaKnown RBP17.53■□□□□ 0.4
RTN4-210ENST00000427710 CCDC96Q2M329 555 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 PPP4R3BQ5MIZ7 849 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 TTBK2Q6IQ55 1244 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 RCSD1Q6JBY9 416 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 RIOX2Q8IUF8 465 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 ESR2Q92731 530 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 GMCL1Q96IK5 515 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 DEFB118Q96PH6 123 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.53■□□□□ 0.45e-11■■■■■ 33.6
RTN4-210ENST00000427710 SYNPO2Q9UMS6 1093 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 RIPK3Q9Y572 518 aa17.53■□□□□ 0.4
RTN4-210ENST00000427710 CTDP1Q9Y5B0 961 aaPredicted RBP17.53■□□□□ 0.4
RTN4-210ENST00000427710 ZBED4O75132 1171 aa17.52■□□□□ 0.4
RTN4-210ENST00000427710 PCP11498 1178 aaKnown RBP17.52■□□□□ 0.4
RTN4-210ENST00000427710 PRKAR2AP13861 404 aaKnown RBP17.52■□□□□ 0.4
RTN4-210ENST00000427710 TAL1P17542 331 aaPredicted RBP17.52■□□□□ 0.4
RTN4-210ENST00000427710 CCND3P30281 292 aaPredicted RBP17.52■□□□□ 0.4
RTN4-210ENST00000427710 CACNB2Q08289 660 aaPredicted RBP17.52■□□□□ 0.4
RTN4-210ENST00000427710 SNRNP48Q6IEG0 339 aaKnown RBP17.52■□□□□ 0.4
RTN4-210ENST00000427710 DPP9Q86TI2 863 aa17.52■□□□□ 0.4
RTN4-210ENST00000427710 U2AF1L4Q8WU68 220 aaKnown RBP17.52■□□□□ 0.4
RTN4-210ENST00000427710 MMP19Q99542 508 aa17.52■□□□□ 0.4
RTN4-210ENST00000427710 MROH8Q9H579 483 aa17.52■□□□□ 0.4
RTN4-210ENST00000427710 GPCPD1Q9NPB8 672 aa17.52■□□□□ 0.4
RTN4-210ENST00000427710 ZSWIM5Q9P217 1185 aa17.52■□□□□ 0.4
RTN4-210ENST00000427710 SLC25A27O95847 323 aa17.51■□□□□ 0.39
RTN4-210ENST00000427710 PGK2P07205 417 aa17.51■□□□□ 0.39
RTN4-210ENST00000427710 CYP21A2P08686 494 aa17.51■□□□□ 0.39
RTN4-210ENST00000427710 SLC16A2P36021 539 aa17.51■□□□□ 0.39
RTN4-210ENST00000427710 GJA8P48165 433 aa17.51■□□□□ 0.39
RTN4-210ENST00000427710 STAT2P52630 851 aa17.51■□□□□ 0.39
RTN4-210ENST00000427710 DCAF4Q8WV16 495 aa17.51■□□□□ 0.39
RTN4-210ENST00000427710 SLC38A10Q9HBR0 1119 aa17.51■□□□□ 0.39
RTN4-210ENST00000427710 PAK6Q9NQU5 681 aaPredicted RBP17.51■□□□□ 0.39
RTN4-210ENST00000427710 CEP290O15078 2479 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 RPTORQ8N122 1335 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 SGPL1O95470 568 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
RTN4-210ENST00000427710 FCER1AP12319 257 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 CYP2C19P33261 490 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 MAP3K21Q5TCX8 1036 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 CCDC174Q6PII3 467 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 CYB5R4Q7L1T6 521 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 CHURC1Q8WUH1 139 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 ESYT1Q9BSJ8 1104 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 TEX13BQ9BXU2 312 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 HMX1Q9NP08 348 aaPredicted RBP17.5■□□□□ 0.39
RTN4-210ENST00000427710 HOMER2Q9NSB8 354 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 PRR12Q9ULL5 1215 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 RBM8AQ9Y5S9 174 aaKnown RBP17.5■□□□□ 0.39
RTN4-210ENST00000427710 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
RTN4-210ENST00000427710 ALPK3Q96L96 1907 aa17.5■□□□□ 0.39
RTN4-210ENST00000427710 STRNO43815 780 aa17.49■□□□□ 0.39
RTN4-210ENST00000427710 HOXC6P09630 235 aa17.49■□□□□ 0.39
RTN4-210ENST00000427710 STOX1Q6ZVD7 989 aa17.49■□□□□ 0.39
RTN4-210ENST00000427710 FAM160B2Q86V87 743 aa17.49■□□□□ 0.39
RTN4-210ENST00000427710 TRMT44Q8IYL2 757 aaKnown RBP17.49■□□□□ 0.39
RTN4-210ENST00000427710 AGBL1Q96MI9 1066 aa17.49■□□□□ 0.39
RTN4-210ENST00000427710 KRT23Q9C075 422 aa17.49■□□□□ 0.39
RTN4-210ENST00000427710 LSG1Q9H089 658 aaKnown RBP17.49■□□□□ 0.39
RTN4-210ENST00000427710 PDHBP11177 359 aa17.48■□□□□ 0.39
RTN4-210ENST00000427710 PRAMEF19Q5SWL8 479 aa17.48■□□□□ 0.39
RTN4-210ENST00000427710 MFSD14CQ5VZR4 134 aa17.48■□□□□ 0.39
RTN4-210ENST00000427710 IQCA1Q86XH1 822 aa17.48■□□□□ 0.39
RTN4-210ENST00000427710 ENAHQ8N8S7 591 aaPredicted RBP17.48■□□□□ 0.39
RTN4-210ENST00000427710 TRPV1Q8NER1 839 aa17.48■□□□□ 0.39
RTN4-210ENST00000427710 MAP4K1Q92918 833 aa17.48■□□□□ 0.39
RTN4-210ENST00000427710 TTC14Q96N46 770 aa17.48■□□□□ 0.39
RTN4-210ENST00000427710 ZSCAN10Q96SZ4 725 aaPredicted RBP17.48■□□□□ 0.39
RTN4-210ENST00000427710 CPVLQ9H3G5 476 aa17.48■□□□□ 0.39
RTN4-210ENST00000427710 LCTP09848 1927 aa17.48■□□□□ 0.39
RTN4-210ENST00000427710 ZNF536O15090 1300 aa17.47■□□□□ 0.39
RTN4-210ENST00000427710 TNKSO95271 1327 aa17.47■□□□□ 0.39
RTN4-210ENST00000427710 E7EWF7 191 aa17.47■□□□□ 0.39
RTN4-210ENST00000427710 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
RTN4-210ENST00000427710 GOLGA8HP0CJ92 632 aa17.47■□□□□ 0.39
RTN4-210ENST00000427710 KCTD2Q14681 263 aa17.47■□□□□ 0.39
RTN4-210ENST00000427710 SYDE2Q5VT97 1194 aa17.47■□□□□ 0.39
RTN4-210ENST00000427710 KIAA1211Q6ZU35 1233 aa17.47■□□□□ 0.39
RTN4-210ENST00000427710 CHST3Q7LGC8 479 aa17.47■□□□□ 0.39
RTN4-210ENST00000427710 CNNM2Q9H8M5 875 aa17.47■□□□□ 0.39
RTN4-210ENST00000427710 ATP2A1O14983 1001 aa17.46■□□□□ 0.39
RTN4-210ENST00000427710 PLA2G6O60733 806 aa17.46■□□□□ 0.39
RTN4-210ENST00000427710 CNGA1P29973 690 aa17.46■□□□□ 0.39
RTN4-210ENST00000427710 DGKHQ86XP1 1220 aa17.46■□□□□ 0.39
RTN4-210ENST00000427710 ABRAQ8N0Z2 381 aa17.46■□□□□ 0.39
RTN4-210ENST00000427710 PNMA1Q8ND90 353 aa17.46■□□□□ 0.39
RTN4-210ENST00000427710 DIS3LQ8TF46 1054 aaKnown RBP17.46■□□□□ 0.39
RTN4-210ENST00000427710 MAML3Q96JK9 1138 aa17.46■□□□□ 0.39
RTN4-210ENST00000427710 CRISPLD2Q9H0B8 497 aa17.46■□□□□ 0.39
RTN4-210ENST00000427710 KAT14Q9H8E8 782 aa17.46■□□□□ 0.39
RTN4-210ENST00000427710 FARP2O94887 1054 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms