RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 KIFC2Q96AC6 838 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 GMCL1Q96IK5 515 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 FEM1BQ9UK73 627 aa22.68■■□□□ 1.22
COL9A2-204ENST00000427563 SMCHD1A6NHR9 2005 aa22.67■■□□□ 1.22
COL9A2-204ENST00000427563 MCCP23508 829 aa22.67■■□□□ 1.22
COL9A2-204ENST00000427563 MFAP1P55081 439 aaKnown RBP22.67■■□□□ 1.22
COL9A2-204ENST00000427563 RCSD1Q6JBY9 416 aa22.67■■□□□ 1.22
COL9A2-204ENST00000427563 SKAP1Q86WV1 359 aa22.67■■□□□ 1.22
COL9A2-204ENST00000427563 DSCC1Q9BVC3 393 aa22.67■■□□□ 1.22
COL9A2-204ENST00000427563 SLC38A10Q9HBR0 1119 aa22.67■■□□□ 1.22
COL9A2-204ENST00000427563 TCP11L1Q9NUJ3 509 aa22.67■■□□□ 1.22
COL9A2-204ENST00000427563 OGDHLQ9ULD0 1010 aa22.67■■□□□ 1.22
COL9A2-204ENST00000427563 TMEM232C9JQI7 657 aa22.66■■□□□ 1.22
COL9A2-204ENST00000427563 OLFML2BQ68BL8 750 aa22.66■■□□□ 1.22
COL9A2-204ENST00000427563 DPP9Q86TI2 863 aa22.66■■□□□ 1.22
COL9A2-204ENST00000427563 TOMM22Q9NS69 142 aa22.66■■□□□ 1.22
COL9A2-204ENST00000427563 ATP2A1O14983 1001 aa22.65■■□□□ 1.22
COL9A2-204ENST00000427563 PGK2P07205 417 aa22.65■■□□□ 1.22
COL9A2-204ENST00000427563 CHMLP26374 656 aa22.65■■□□□ 1.22
COL9A2-204ENST00000427563 SNRNP48Q6IEG0 339 aaKnown RBP22.65■■□□□ 1.22
COL9A2-204ENST00000427563 KCTD1Q719H9 257 aa22.65■■□□□ 1.22
COL9A2-204ENST00000427563 PAWRQ96IZ0 340 aaKnown RBP22.65■■□□□ 1.22
COL9A2-204ENST00000427563 MAML3Q96JK9 1138 aa22.65■■□□□ 1.22
COL9A2-204ENST00000427563 MMP19Q99542 508 aa22.65■■□□□ 1.22
COL9A2-204ENST00000427563 TMEM47Q9BQJ4 181 aa22.65■■□□□ 1.22
COL9A2-204ENST00000427563 TEX13BQ9BXU2 312 aa22.65■■□□□ 1.22
COL9A2-204ENST00000427563 RAVER2Q9HCJ3 691 aaKnown RBP22.65■■□□□ 1.22
COL9A2-204ENST00000427563 ZNF536O15090 1300 aa22.64■■□□□ 1.22
COL9A2-204ENST00000427563 FCER1AP12319 257 aa22.64■■□□□ 1.21
COL9A2-204ENST00000427563 CYBAP13498 195 aa22.64■■□□□ 1.21
COL9A2-204ENST00000427563 SLC1A4P43007 532 aa22.64■■□□□ 1.21
COL9A2-204ENST00000427563 ZNF792Q3KQV3 632 aa22.64■■□□□ 1.21
COL9A2-204ENST00000427563 MFSD14CQ5VZR4 134 aa22.64■■□□□ 1.21
COL9A2-204ENST00000427563 MFSD6Q6ZSS7 791 aa22.64■■□□□ 1.21
COL9A2-204ENST00000427563 CPXCR1Q8N123 301 aa22.64■■□□□ 1.21
COL9A2-204ENST00000427563 ZNF213O14771 459 aa22.63■■□□□ 1.21
COL9A2-204ENST00000427563 CAPN2P17655 700 aa22.63■■□□□ 1.21
COL9A2-204ENST00000427563 PPP4R3BQ5MIZ7 849 aa22.63■■□□□ 1.21
COL9A2-204ENST00000427563 MTMR7Q9Y216 660 aa22.63■■□□□ 1.21
COL9A2-204ENST00000427563 CEP290O15078 2479 aa22.62■■□□□ 1.21
COL9A2-204ENST00000427563 PLA2G6O60733 806 aa22.62■■□□□ 1.21
COL9A2-204ENST00000427563 ZBED4O75132 1171 aa22.62■■□□□ 1.21
COL9A2-204ENST00000427563 PCP11498 1178 aaKnown RBP22.62■■□□□ 1.21
COL9A2-204ENST00000427563 STAT2P52630 851 aa22.62■■□□□ 1.21
COL9A2-204ENST00000427563 SNAP25P60880 206 aa22.62■■□□□ 1.21
COL9A2-204ENST00000427563 PRAMEF19Q5SWL8 479 aa22.62■■□□□ 1.21
COL9A2-204ENST00000427563 TTBK2Q6IQ55 1244 aa22.62■■□□□ 1.21
COL9A2-204ENST00000427563 ANKLE1Q8NAG6 615 aa22.62■■□□□ 1.21
COL9A2-204ENST00000427563 ZKSCAN3Q9BRR0 538 aa22.62■■□□□ 1.21
COL9A2-204ENST00000427563 DNAJC25-GNG10A0A024R161 153 aa22.61■■□□□ 1.21
COL9A2-204ENST00000427563 TOP1P11387 765 aaKnown RBP22.61■■□□□ 1.21
COL9A2-204ENST00000427563 COPB2P35606 906 aa22.61■■□□□ 1.21
COL9A2-204ENST00000427563 PTH1RQ03431 593 aa22.61■■□□□ 1.21
COL9A2-204ENST00000427563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.61■■□□□ 1.21
COL9A2-204ENST00000427563 FAM160B2Q86V87 743 aa22.61■■□□□ 1.21
COL9A2-204ENST00000427563 MCM3APO60318 1980 aa22.61■■□□□ 1.21
COL9A2-204ENST00000427563 LCTP09848 1927 aa22.61■■□□□ 1.21
COL9A2-204ENST00000427563 PFASO15067 1338 aa22.6■■□□□ 1.21
COL9A2-204ENST00000427563 RAD50Q92878 1312 aa22.6■■□□□ 1.21
COL9A2-204ENST00000427563 H0YGN5 161 aa22.6■■□□□ 1.21
COL9A2-204ENST00000427563 TAL1P17542 331 aaPredicted RBP22.6■■□□□ 1.21
COL9A2-204ENST00000427563 SLC4A3P48751 1232 aa22.6■■□□□ 1.21
COL9A2-204ENST00000427563 FGD4Q96M96 766 aa22.6■■□□□ 1.21
COL9A2-204ENST00000427563 AGBL1Q96MI9 1066 aa22.6■■□□□ 1.21
COL9A2-204ENST00000427563 RNF41Q9H4P4 317 aaPredicted RBP22.6■■□□□ 1.21
COL9A2-204ENST00000427563 DDX20Q9UHI6 824 aaKnown RBP22.6■■□□□ 1.21
COL9A2-204ENST00000427563 PRR12Q9ULL5 1215 aa22.6■■□□□ 1.21
COL9A2-204ENST00000427563 B4E1Z4 1266 aa22.59■■□□□ 1.21
COL9A2-204ENST00000427563 KDM4AO75164 1064 aa22.59■■□□□ 1.21
COL9A2-204ENST00000427563 OAZ1P54368 228 aa22.59■■□□□ 1.21
COL9A2-204ENST00000427563 KCTD2Q14681 263 aa22.59■■□□□ 1.21
COL9A2-204ENST00000427563 CHURC1Q8WUH1 139 aa22.59■■□□□ 1.21
COL9A2-204ENST00000427563 DCAF4Q8WV16 495 aa22.59■■□□□ 1.21
COL9A2-204ENST00000427563 DPF3Q92784 378 aa22.59■■□□□ 1.21
COL9A2-204ENST00000427563 ISY1Q9ULR0 285 aaKnown RBP22.59■■□□□ 1.21
COL9A2-204ENST00000427563 DIS3Q9Y2L1 958 aaKnown RBP22.59■■□□□ 1.21
COL9A2-204ENST00000427563 TAF6LQ9Y6J9 622 aa22.59■■□□□ 1.21
COL9A2-204ENST00000427563 FRMPD2Q68DX3 1309 aaPredicted RBP22.58■■□□□ 1.21
COL9A2-204ENST00000427563 SGSM2O43147 1006 aa22.58■■□□□ 1.21
COL9A2-204ENST00000427563 PDHBP11177 359 aa22.58■■□□□ 1.21
COL9A2-204ENST00000427563 COL6A1P12109 1028 aa22.58■■□□□ 1.21
COL9A2-204ENST00000427563 SLC16A2P36021 539 aa22.58■■□□□ 1.21
COL9A2-204ENST00000427563 BTNL9Q6UXG8 535 aa22.58■■□□□ 1.21
COL9A2-204ENST00000427563 NECAB2Q7Z6G3 386 aa22.58■■□□□ 1.21
COL9A2-204ENST00000427563 ESR2Q92731 530 aa22.58■■□□□ 1.21
COL9A2-204ENST00000427563 TTC14Q96N46 770 aa22.58■■□□□ 1.21
COL9A2-204ENST00000427563 HTATIP2Q9BUP3 242 aa22.58■■□□□ 1.21
COL9A2-204ENST00000427563 SNHG28P0DPA3 235 aa22.57■■□□□ 1.2
COL9A2-204ENST00000427563 CNGA1P29973 690 aa22.57■■□□□ 1.2
COL9A2-204ENST00000427563 IKQ13123 557 aaPredicted RBP22.57■■□□□ 1.2
COL9A2-204ENST00000427563 IMMTQ16891 758 aaKnown RBP22.57■■□□□ 1.2
COL9A2-204ENST00000427563 CCDC96Q2M329 555 aa22.57■■□□□ 1.2
COL9A2-204ENST00000427563 ANO1Q5XXA6 986 aa22.57■■□□□ 1.2
COL9A2-204ENST00000427563 SLC5A4Q9NY91 659 aa22.57■■□□□ 1.2
COL9A2-204ENST00000427563 ZSWIM5Q9P217 1185 aa22.57■■□□□ 1.2
COL9A2-204ENST00000427563 FDX1P10109 184 aa22.56■■□□□ 1.2
COL9A2-204ENST00000427563 CCDC174Q6PII3 467 aa22.56■■□□□ 1.2
COL9A2-204ENST00000427563 TINF2Q9BSI4 451 aa22.56■■□□□ 1.2
COL9A2-204ENST00000427563 C11orf49Q9H6J7 331 aa22.56■■□□□ 1.2
COL9A2-204ENST00000427563 HOMER2Q9NSB8 354 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms