RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 SIRT5Q9NXA8 310 aa8.03□□□□□ -1.12
LINC00458-202ENST00000427299 PCDHB14Q9Y5E9 798 aa8.03□□□□□ -1.12
LINC00458-202ENST00000427299 ROBO2Q9HCK4 1378 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 N4BP3O15049 544 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 FOXD2O60548 495 aaPredicted RBP8.02□□□□□ -1.13
LINC00458-202ENST00000427299 FKTNO75072 461 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 PRAMEF1O95521 474 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 SYPP08247 313 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 SDHBP21912 280 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 POLR2BP30876 1174 aaKnown RBP8.02□□□□□ -1.13
LINC00458-202ENST00000427299 CDCP2Q5VXM1 449 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 OVOS1Q6IE37 1185 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 EPB41L4AQ9HCS5 686 aaPredicted RBP8.02□□□□□ -1.13
LINC00458-202ENST00000427299 MRS2Q9HD23 443 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 RTEL1Q9NZ71 1219 aa8.02□□□□□ -1.13
LINC00458-202ENST00000427299 CCDC9Q9Y3X0 531 aaKnown RBP8.02□□□□□ -1.13
LINC00458-202ENST00000427299 SSU72P8A0A1W2PR75 194 aa8.01□□□□□ -1.13
LINC00458-202ENST00000427299 IRS4O14654 1257 aaPredicted RBP8.01□□□□□ -1.13
LINC00458-202ENST00000427299 SIGLEC6O43699 453 aa8.01□□□□□ -1.13
LINC00458-202ENST00000427299 GREM1O60565 184 aa8.01□□□□□ -1.13
LINC00458-202ENST00000427299 RTP1P59025 263 aa8.01□□□□□ -1.13
LINC00458-202ENST00000427299 ERVFRD-1P60508 538 aa8.01□□□□□ -1.13
LINC00458-202ENST00000427299 TMCO4Q5TGY1 634 aa8.01□□□□□ -1.13
LINC00458-202ENST00000427299 FCRL2Q96LA5 508 aaPredicted RBP8.01□□□□□ -1.13
LINC00458-202ENST00000427299 XYLT2Q9H1B5 865 aa8.01□□□□□ -1.13
LINC00458-202ENST00000427299 CNNM2Q9H8M5 875 aa8.01□□□□□ -1.13
LINC00458-202ENST00000427299 COPRSQ9NQ92 184 aa8.01□□□□□ -1.13
LINC00458-202ENST00000427299 MYO15BQ96JP2 1530 aa8□□□□□ -1.13
LINC00458-202ENST00000427299 FADS2P1A8MWK0 482 aa8□□□□□ -1.13
LINC00458-202ENST00000427299 RAD51AP2Q09MP3 1159 aa8□□□□□ -1.13
LINC00458-202ENST00000427299 NFIXQ14938 502 aa8□□□□□ -1.13
LINC00458-202ENST00000427299 PRDM14Q9GZV8 571 aa8□□□□□ -1.13
LINC00458-202ENST00000427299 EHMT1Q9H9B1 1298 aa8□□□□□ -1.13
LINC00458-202ENST00000427299 TNFRSF10DQ9UBN6 386 aa8□□□□□ -1.13
LINC00458-202ENST00000427299 CRKP46108 304 aa7.99□□□□□ -1.13
LINC00458-202ENST00000427299 AFF3P51826 1226 aaKnown RBP7.99□□□□□ -1.13
LINC00458-202ENST00000427299 KRTAP17-1Q9BYP8 105 aa7.99□□□□□ -1.13
LINC00458-202ENST00000427299 MINPP1Q9UNW1 487 aa7.99□□□□□ -1.13
LINC00458-202ENST00000427299 SUPT16HQ9Y5B9 1047 aaKnown RBP7.99□□□□□ -1.13
LINC00458-202ENST00000427299 ABLIM1O14639 778 aa7.98□□□□□ -1.13
LINC00458-202ENST00000427299 EIF4A3P38919 411 aaKnown RBP7.98□□□□□ -1.13
LINC00458-202ENST00000427299 RANGAP1P46060 587 aaPredicted RBP7.98□□□□□ -1.13
LINC00458-202ENST00000427299 CEBPAP49715 358 aaPredicted RBP7.98□□□□□ -1.13
LINC00458-202ENST00000427299 CDR1P51861 262 aa7.98□□□□□ -1.13
LINC00458-202ENST00000427299 MFAP1P55081 439 aaKnown RBP7.98□□□□□ -1.13
LINC00458-202ENST00000427299 KIR3DS1Q14943 382 aa7.98□□□□□ -1.13
LINC00458-202ENST00000427299 HSF5Q4G112 596 aaPredicted RBP7.98□□□□□ -1.13
LINC00458-202ENST00000427299 OLFML2BQ68BL8 750 aa7.98□□□□□ -1.13
LINC00458-202ENST00000427299 RGS22Q8NE09 1264 aa7.98□□□□□ -1.13
LINC00458-202ENST00000427299 ATG4CQ96DT6 458 aa7.98□□□□□ -1.13
LINC00458-202ENST00000427299 GPR55Q9Y2T6 319 aaPredicted RBP7.98□□□□□ -1.13
LINC00458-202ENST00000427299 CLEC3AO75596 197 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 SYN1P17600 705 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 CCNFP41002 786 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 GALNT18Q6P9A2 607 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 NLRC3Q7RTR2 1065 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 TMEFF1Q8IYR6 380 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 CXorf38Q8TB03 319 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 MZB1Q8WU39 189 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 ZNF512BQ96KM6 892 aaPredicted RBP7.97□□□□□ -1.13
LINC00458-202ENST00000427299 CHST7Q9NS84 486 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 ERVK13-1Q9NX77 482 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 KLHL14Q9P2G3 628 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 JAG2Q9Y219 1238 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 TAF6LQ9Y6J9 622 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 ADAMTS20P59510 1910 aa7.97□□□□□ -1.13
LINC00458-202ENST00000427299 WTIPA6NIX2 430 aaPredicted RBP7.96□□□□□ -1.14
LINC00458-202ENST00000427299 SLCO6A1Q86UG4 719 aa7.96□□□□□ -1.14
LINC00458-202ENST00000427299 IGDCC3Q8IVU1 814 aa7.96□□□□□ -1.14
LINC00458-202ENST00000427299 ZNF296Q8WUU4 475 aaPredicted RBP7.96□□□□□ -1.14
LINC00458-202ENST00000427299 OTOL1A6NHN0 477 aaPredicted RBP7.95□□□□□ -1.14
LINC00458-202ENST00000427299 SASH1O94885 1247 aa7.95□□□□□ -1.14
LINC00458-202ENST00000427299 ZNF205O95201 554 aa7.95□□□□□ -1.14
LINC00458-202ENST00000427299 MPOP05164 745 aa7.95□□□□□ -1.14
LINC00458-202ENST00000427299 ITGAEP38570 1179 aa7.95□□□□□ -1.14
LINC00458-202ENST00000427299 CTSKP43235 329 aa7.95□□□□□ -1.14
LINC00458-202ENST00000427299 TMEM192Q8IY95 271 aa7.95□□□□□ -1.14
LINC00458-202ENST00000427299 ENDOUP21128 410 aaKnown RBP7.94□□□□□ -1.14
LINC00458-202ENST00000427299 BMP8BP34820 402 aa7.94□□□□□ -1.14
LINC00458-202ENST00000427299 ARL4AP40617 200 aa7.94□□□□□ -1.14
LINC00458-202ENST00000427299 CLCQ05315 142 aa7.94□□□□□ -1.14
LINC00458-202ENST00000427299 LAPTM5Q13571 262 aa7.94□□□□□ -1.14
LINC00458-202ENST00000427299 LDHDQ86WU2 507 aa7.94□□□□□ -1.14
LINC00458-202ENST00000427299 FAM129CQ86XR2 697 aa7.94□□□□□ -1.14
LINC00458-202ENST00000427299 REXO1Q8N1G1 1221 aaKnown RBP7.94□□□□□ -1.14
LINC00458-202ENST00000427299 TNFRSF12AQ9NP84 129 aa7.94□□□□□ -1.14
LINC00458-202ENST00000427299 A0A1W2PQ45 241 aaPredicted RBP7.93□□□□□ -1.14
LINC00458-202ENST00000427299 A0A1W2PQY0 241 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 MEIS3P2A8K0S8 358 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 PRKCAP17252 672 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 CCDC27Q2M243 656 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 CNKSR3Q6P9H4 555 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 TMC6Q7Z403 805 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 FEZF2Q8TBJ5 459 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 ANTXR1Q9H6X2 564 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 GFOD1Q9NXC2 390 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 UBP1Q9NZI7 540 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 ADAMTS1Q9UHI8 967 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 ACSL6Q9UKU0 697 aa7.93□□□□□ -1.14
LINC00458-202ENST00000427299 PCDHA5Q9Y5H7 936 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms