RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 CCSAPQ6IQ19 270 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-206ENST00000426196 RIOK1Q9BRS2 568 aaKnown RBP17.19■□□□□ 0.34
HDAC6-206ENST00000426196 ZHX1Q9UKY1 873 aaPredicted RBP17.19■□□□□ 0.34
HDAC6-206ENST00000426196 MAGEB6P1A0A0J9YX57 407 aa17.18■□□□□ 0.34
HDAC6-206ENST00000426196 MYADML2A6NDP7 307 aa17.18■□□□□ 0.34
HDAC6-206ENST00000426196 ASGR1P07306 291 aa17.18■□□□□ 0.34
HDAC6-206ENST00000426196 TFF2Q03403 129 aa17.18■□□□□ 0.34
HDAC6-206ENST00000426196 LRFN3Q9BTN0 628 aa17.18■□□□□ 0.34
HDAC6-206ENST00000426196 SWAP70Q9UH65 585 aa17.18■□□□□ 0.34
HDAC6-206ENST00000426196 ADAMTS5Q9UNA0 930 aa17.18■□□□□ 0.34
HDAC6-206ENST00000426196 YBX2Q9Y2T7 364 aaKnown RBP17.18■□□□□ 0.34
HDAC6-206ENST00000426196 FGBP02675 491 aa17.17■□□□□ 0.34
HDAC6-206ENST00000426196 PPP2R2DQ66LE6 453 aa17.17■□□□□ 0.34
HDAC6-206ENST00000426196 CLEC10AQ8IUN9 316 aa17.17■□□□□ 0.34
HDAC6-206ENST00000426196 FAM126BQ8IXS8 530 aa17.17■□□□□ 0.34
HDAC6-206ENST00000426196 TLR7Q9NYK1 1049 aaKnown RBP17.17■□□□□ 0.34
HDAC6-206ENST00000426196 BAZ2AQ9UIF9 1905 aaKnown RBP17.16■□□□□ 0.34
HDAC6-206ENST00000426196 VWA5AO00534 786 aa17.16■□□□□ 0.34
HDAC6-206ENST00000426196 SURF6O75683 361 aaKnown RBP17.16■□□□□ 0.34
HDAC6-206ENST00000426196 CYP2C18P33260 490 aa17.16■□□□□ 0.34
HDAC6-206ENST00000426196 KCNQ1P51787 676 aa17.16■□□□□ 0.34
HDAC6-206ENST00000426196 RARSP54136 660 aaKnown RBP17.16■□□□□ 0.34
HDAC6-206ENST00000426196 EVX2Q03828 476 aa17.16■□□□□ 0.34
HDAC6-206ENST00000426196 POLA2Q14181 598 aa17.16■□□□□ 0.34
HDAC6-206ENST00000426196 TMEM31Q5JXX7 168 aa17.16■□□□□ 0.34
HDAC6-206ENST00000426196 TRMT2AQ8IZ69 625 aaKnown RBP17.16■□□□□ 0.34
HDAC6-206ENST00000426196 DDX11Q96FC9 970 aa17.16■□□□□ 0.34
HDAC6-206ENST00000426196 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-206ENST00000426196 FBXO28Q9NVF7 368 aa17.16■□□□□ 0.34
HDAC6-206ENST00000426196 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-206ENST00000426196 PPP1R9AQ9ULJ8 1098 aa17.16■□□□□ 0.34
HDAC6-206ENST00000426196 BRWD1Q9NSI6 2320 aa17.15■□□□□ 0.34
HDAC6-206ENST00000426196 ERC2O15083 957 aa17.15■□□□□ 0.34
HDAC6-206ENST00000426196 IPO8O15397 1037 aaKnown RBP17.15■□□□□ 0.34
HDAC6-206ENST00000426196 SNAI1O95863 264 aaPredicted RBP17.15■□□□□ 0.34
HDAC6-206ENST00000426196 GNASQ5JWF2 1037 aa17.15■□□□□ 0.34
HDAC6-206ENST00000426196 MAMDC4Q6UXC1 1216 aa17.15■□□□□ 0.34
HDAC6-206ENST00000426196 OTOP2Q7RTS6 562 aa17.15■□□□□ 0.34
HDAC6-206ENST00000426196 SIAH1Q8IUQ4 282 aa17.15■□□□□ 0.34
HDAC6-206ENST00000426196 ANTXR1Q9H6X2 564 aa17.15■□□□□ 0.34
HDAC6-206ENST00000426196 GOPCQ9HD26 462 aa17.15■□□□□ 0.34
HDAC6-206ENST00000426196 LRRC37A2A6NM11 1700 aa17.15■□□□□ 0.34
HDAC6-206ENST00000426196 GTPBP6O43824 516 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-206ENST00000426196 AKR1B1P15121 316 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 GJA9P57773 515 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 ACVR2BQ13705 512 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 SSH3Q8TE77 659 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 CCDC17Q96LX7 622 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 TEX13BQ9BXU2 312 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 UPF3AQ9H1J1 476 aaKnown RBP17.14■□□□□ 0.33
HDAC6-206ENST00000426196 HIPK3Q9H422 1215 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 EPHX3Q9H6B9 360 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 PCDHA11Q9Y5I1 949 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 SLC4A7Q9Y6M7 1214 aa17.14■□□□□ 0.33
HDAC6-206ENST00000426196 RAD21O60216 631 aa17.13■□□□□ 0.33
HDAC6-206ENST00000426196 CD4P01730 458 aa17.13■□□□□ 0.33
HDAC6-206ENST00000426196 TRIM27P14373 513 aa17.13■□□□□ 0.33
HDAC6-206ENST00000426196 RABGGTBP53611 331 aa17.13■□□□□ 0.33
HDAC6-206ENST00000426196 IRX5P78411 483 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-206ENST00000426196 ZNF467Q7Z7K2 595 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-206ENST00000426196 SDR42E1Q8WUS8 393 aa17.13■□□□□ 0.33
HDAC6-206ENST00000426196 DYNLL2Q96FJ2 89 aa17.13■□□□□ 0.33
HDAC6-206ENST00000426196 ABHD16BQ9H3Z7 469 aa17.13■□□□□ 0.33
HDAC6-206ENST00000426196 DCP1AQ9NPI6 582 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-206ENST00000426196 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-206ENST00000426196 CYP2D6P10635 497 aa17.12■□□□□ 0.33
HDAC6-206ENST00000426196 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-206ENST00000426196 CCDC144BQ3MJ40 725 aa17.12■□□□□ 0.33
HDAC6-206ENST00000426196 SLC9C2Q5TAH2 1124 aa17.12■□□□□ 0.33
HDAC6-206ENST00000426196 SNRNP48Q6IEG0 339 aaKnown RBP17.12■□□□□ 0.33
HDAC6-206ENST00000426196 RPUSD2Q8IZ73 545 aaKnown RBP17.12■□□□□ 0.33
HDAC6-206ENST00000426196 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
HDAC6-206ENST00000426196 EAF2Q96CJ1 260 aaPredicted RBP17.12■□□□□ 0.33
HDAC6-206ENST00000426196 COG5Q9UP83 839 aa17.12■□□□□ 0.33
HDAC6-206ENST00000426196 DNAJC25-GNG10A0A024R161 153 aa17.11■□□□□ 0.33
HDAC6-206ENST00000426196 ZBBXA8MT70 800 aa17.11■□□□□ 0.33
HDAC6-206ENST00000426196 ADCY6O43306 1168 aa17.11■□□□□ 0.33
HDAC6-206ENST00000426196 EEF2P13639 858 aaKnown RBP17.11■□□□□ 0.33
HDAC6-206ENST00000426196 PDE6AP16499 860 aa17.11■□□□□ 0.33
HDAC6-206ENST00000426196 FAM83BQ5T0W9 1011 aa17.11■□□□□ 0.33
HDAC6-206ENST00000426196 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
HDAC6-206ENST00000426196 KANSL2Q9H9L4 492 aa17.11■□□□□ 0.33
HDAC6-206ENST00000426196 BCAR3O75815 825 aa17.1■□□□□ 0.33
HDAC6-206ENST00000426196 CABYRO75952 493 aa17.1■□□□□ 0.33
HDAC6-206ENST00000426196 MYOGP15173 224 aa17.1■□□□□ 0.33
HDAC6-206ENST00000426196 ATP2A2P16615 1042 aaKnown RBP17.1■□□□□ 0.33
HDAC6-206ENST00000426196 CCL23P55773 120 aa17.1■□□□□ 0.33
HDAC6-206ENST00000426196 ATP8B2P98198 1209 aa17.1■□□□□ 0.33
HDAC6-206ENST00000426196 CLUAP1Q96AJ1 413 aa17.1■□□□□ 0.33
HDAC6-206ENST00000426196 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
HDAC6-206ENST00000426196 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
HDAC6-206ENST00000426196 MTCH2Q9Y6C9 303 aa17.1■□□□□ 0.33
HDAC6-206ENST00000426196 GPR37L1O60883 481 aa17.09■□□□□ 0.33
HDAC6-206ENST00000426196 POU3F3P20264 500 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-206ENST00000426196 LCORLQ8N3X6 602 aa17.09■□□□□ 0.33
HDAC6-206ENST00000426196 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-206ENST00000426196 SEZ6LQ9BYH1 1024 aa17.09■□□□□ 0.33
HDAC6-206ENST00000426196 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-206ENST00000426196 UMODL1Q5DID0 1318 aa17.09■□□□□ 0.33
HDAC6-206ENST00000426196 ZNF532Q9HCE3 1301 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms