RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PPP4R3BQ5MIZ7 849 aa21.68■■□□□ 1.06
SMARCAL1-205ENST00000425815 MFSD14CQ5VZR4 134 aa21.68■■□□□ 1.06
SMARCAL1-205ENST00000425815 OLFML2BQ68BL8 750 aa21.68■■□□□ 1.06
SMARCAL1-205ENST00000425815 MFSD6Q6ZSS7 791 aa21.68■■□□□ 1.06
SMARCAL1-205ENST00000425815 DIS3LQ8TF46 1054 aaKnown RBP21.68■■□□□ 1.06
SMARCAL1-205ENST00000425815 TOMM22Q9NS69 142 aa21.68■■□□□ 1.06
SMARCAL1-205ENST00000425815 PDE4DIPQ5VU43 2346 aa21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 ZNF213O14771 459 aa21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 ZBED4O75132 1171 aa21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 CHMLP26374 656 aa21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 SLC1A4P43007 532 aa21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 RCSD1Q6JBY9 416 aa21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 PAWRQ96IZ0 340 aaKnown RBP21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 MMP19Q99542 508 aa21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 TMEM47Q9BQJ4 181 aa21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 TEX13BQ9BXU2 312 aa21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 RAVER2Q9HCJ3 691 aaKnown RBP21.67■■□□□ 1.06
SMARCAL1-205ENST00000425815 PARP14Q460N5 1801 aa21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 NEDD4P46934 1319 aa21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 PLA2G6O60733 806 aa21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 PGK2P07205 417 aa21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 PCP11498 1178 aaKnown RBP21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 ZNF792Q3KQV3 632 aa21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 SNRNP48Q6IEG0 339 aaKnown RBP21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 KCTD1Q719H9 257 aa21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 CPXCR1Q8N123 301 aa21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 MAML3Q96JK9 1138 aa21.66■■□□□ 1.06
SMARCAL1-205ENST00000425815 ANKLE1Q8NAG6 615 aa21.65■■□□□ 1.06
SMARCAL1-205ENST00000425815 ZNF536O15090 1300 aa21.64■■□□□ 1.05
SMARCAL1-205ENST00000425815 TOP1P11387 765 aaKnown RBP21.64■■□□□ 1.05
SMARCAL1-205ENST00000425815 CYBAP13498 195 aa21.64■■□□□ 1.05
SMARCAL1-205ENST00000425815 COPB2P35606 906 aa21.64■■□□□ 1.05
SMARCAL1-205ENST00000425815 STAT2P52630 851 aa21.64■■□□□ 1.05
SMARCAL1-205ENST00000425815 FAM160B2Q86V87 743 aa21.64■■□□□ 1.05
SMARCAL1-205ENST00000425815 CHURC1Q8WUH1 139 aa21.64■■□□□ 1.05
SMARCAL1-205ENST00000425815 RNF41Q9H4P4 317 aaPredicted RBP21.64■■□□□ 1.05
SMARCAL1-205ENST00000425815 MTMR7Q9Y216 660 aa21.64■■□□□ 1.05
SMARCAL1-205ENST00000425815 OAZ1P54368 228 aa21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 PTH1RQ03431 593 aa21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 KCTD2Q14681 263 aa21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 PRAMEF19Q5SWL8 479 aa21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 TTBK2Q6IQ55 1244 aa21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 SKAP1Q86WV1 359 aa21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 DPF3Q92784 378 aa21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 TTC14Q96N46 770 aa21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 SLC5A4Q9NY91 659 aa21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 DIS3Q9Y2L1 958 aaKnown RBP21.63■■□□□ 1.05
SMARCAL1-205ENST00000425815 DNAJC25-GNG10A0A024R161 153 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 H0YGN5 161 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 SLC4A3P48751 1232 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 SNAP25P60880 206 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 NECAB2Q7Z6G3 386 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 DCAF4Q8WV16 495 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 ESR2Q92731 530 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 AGBL1Q96MI9 1066 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 ZKSCAN3Q9BRR0 538 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 DDX20Q9UHI6 824 aaKnown RBP21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 CTNNA3Q9UI47 895 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 PRR12Q9ULL5 1215 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 ZNF236Q9UL36 1845 aa21.62■■□□□ 1.05
SMARCAL1-205ENST00000425815 KDM4AO75164 1064 aa21.61■■□□□ 1.05
SMARCAL1-205ENST00000425815 FDX1P10109 184 aa21.61■■□□□ 1.05
SMARCAL1-205ENST00000425815 IMMTQ16891 758 aaKnown RBP21.61■■□□□ 1.05
SMARCAL1-205ENST00000425815 BTNL9Q6UXG8 535 aa21.61■■□□□ 1.05
SMARCAL1-205ENST00000425815 HTATIP2Q9BUP3 242 aa21.61■■□□□ 1.05
SMARCAL1-205ENST00000425815 ZSWIM5Q9P217 1185 aa21.61■■□□□ 1.05
SMARCAL1-205ENST00000425815 ISY1Q9ULR0 285 aaKnown RBP21.61■■□□□ 1.05
SMARCAL1-205ENST00000425815 MYH4Q9Y623 1939 aa21.61■■□□□ 1.05
SMARCAL1-205ENST00000425815 RAD50Q92878 1312 aa21.6■■□□□ 1.05
SMARCAL1-205ENST00000425815 B4E1Z4 1266 aa21.6■■□□□ 1.05
SMARCAL1-205ENST00000425815 PDHBP11177 359 aa21.6■■□□□ 1.05
SMARCAL1-205ENST00000425815 CNGA1P29973 690 aa21.6■■□□□ 1.05
SMARCAL1-205ENST00000425815 SLC16A2P36021 539 aa21.6■■□□□ 1.05
SMARCAL1-205ENST00000425815 ANKS1AQ92625 1134 aa21.6■■□□□ 1.05
SMARCAL1-205ENST00000425815 CTDP1Q9Y5B0 961 aaPredicted RBP21.6■■□□□ 1.05
SMARCAL1-205ENST00000425815 COL11A1P12107 1806 aaPredicted RBP21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 SGSM2O43147 1006 aa21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 SNHG28P0DPA3 235 aa21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 COL6A1P12109 1028 aa21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 TAL1P17542 331 aaPredicted RBP21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 IKQ13123 557 aaPredicted RBP21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 DGKHQ86XP1 1220 aa21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 CHST13Q8NET6 341 aa21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 RUFY2Q8WXA3 655 aa21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 FGD4Q96M96 766 aa21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 TINF2Q9BSI4 451 aa21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 C11orf49Q9H6J7 331 aa21.59■■□□□ 1.05
SMARCAL1-205ENST00000425815 PFASO15067 1338 aa21.58■■□□□ 1.05
SMARCAL1-205ENST00000425815 FRMPD2Q68DX3 1309 aaPredicted RBP21.58■■□□□ 1.05
SMARCAL1-205ENST00000425815 NT5C2P49902 561 aa21.58■■□□□ 1.05
SMARCAL1-205ENST00000425815 CCDC96Q2M329 555 aa21.58■■□□□ 1.05
SMARCAL1-205ENST00000425815 DDX11Q96FC9 970 aa21.58■■□□□ 1.05
SMARCAL1-205ENST00000425815 GPCPD1Q9NPB8 672 aa21.58■■□□□ 1.05
SMARCAL1-205ENST00000425815 SEPT4O43236 478 aa21.57■■□□□ 1.04
SMARCAL1-205ENST00000425815 ZNF543Q08ER8 600 aa21.57■■□□□ 1.04
SMARCAL1-205ENST00000425815 ANO1Q5XXA6 986 aa21.57■■□□□ 1.04
SMARCAL1-205ENST00000425815 CCDC174Q6PII3 467 aa21.57■■□□□ 1.04
SMARCAL1-205ENST00000425815 CENPQQ7L2Z9 268 aaPredicted RBP21.57■■□□□ 1.04
SMARCAL1-205ENST00000425815 ZSCAN10Q96SZ4 725 aaPredicted RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms