RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ATP1A1P05023 1023 aaKnown RBP8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 TRIM14Q14142 442 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 DTHD1Q6ZMT9 781 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 IRF2BP1Q8IU81 584 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 GOLGA5Q8TBA6 731 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 TRIM34Q9BYJ4 488 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 CCDC87Q9NVE4 849 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 TFCP2L1Q9NZI6 479 aa8.46□□□□□ -1.06
SMARCC1-202ENST00000425518 B4DLN1 442 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 TRIM21P19474 475 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 INTS5Q6P9B9 1019 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 BLIDQ8IZY5 108 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 MMS19Q96T76 1030 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 FEZ2Q9UHY8 353 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 MACROD2A1Z1Q3 448 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 IPO7O95373 1038 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 TUBB4BP68371 445 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 STIM1Q13586 685 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 PARP10Q53GL7 1025 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 MUM1L1Q5H9M0 696 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 GOLGA6L1Q8N7Z2 621 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 PYM1Q9BRP8 204 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 BRIP1Q9BX63 1249 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 MYO1AQ9UBC5 1043 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 SAR1BQ9Y6B6 198 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 MYH7P12883 1935 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 KLK7P49862 253 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 CYP27A1Q02318 531 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 TBC1D8BQ0IIM8 1120 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 PFKFB3Q16875 520 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 INF2Q27J81 1249 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 FOXR1Q6PIV2 292 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 C3orf67Q6ZVT6 689 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 ADSSL1Q8N142 457 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 ZNF384Q8TF68 577 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 FAM84BQ96KN1 310 aaPredicted RBP8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 TMEM60Q9H2L4 133 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 HAUS4Q9H6D7 363 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 KAT14Q9H8E8 782 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 AGPAT5Q9NUQ2 364 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 ZNHIT6Q9NWK9 470 aaKnown RBP8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 MCM9Q9NXL9 1143 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 DCCP43146 1447 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 FAM205AQ6ZU69 1335 aa8.45□□□□□ -1.06
SMARCC1-202ENST00000425518 PSMA7O14818 248 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 FECHP22830 423 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 KLRK1P26718 216 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 LONP1P36776 959 aaKnown RBP8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 TRAPPC10P48553 1259 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 AMPD2Q01433 879 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 STAG2Q8N3U4 1231 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 CCDC24Q8N4L8 307 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 CSGALNACT2Q8N6G5 542 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 CRNKL1Q9BZJ0 848 aaKnown RBP8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 ACBD3Q9H3P7 528 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 PLEKHA4Q9H4M7 779 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 DCP1AQ9NPI6 582 aaPredicted RBP8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 JADE2Q9NQC1 790 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 DUSP10Q9Y6W6 482 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 LGALS16A8MUM7 142 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 ANKRD65E5RJM6 399 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 CAMTA2O94983 1202 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 NTSR2O95665 410 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 CALML3P27482 149 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 KIF5BP33176 963 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 TFAP4Q01664 338 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 MECOMQ03112 1051 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 ERFEQ4G0M1 354 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 CCDC178Q5BJE1 867 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 HEATR3Q7Z4Q2 680 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 GSPT2Q8IYD1 628 aaKnown RBP8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 JAKMIP2Q96AA8 810 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 DRC1Q96MC2 740 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 FAM204AQ9H8W3 233 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 DISC1Q9NRI5 854 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 PSD3Q9NYI0 1048 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 RSPH14Q9UHP6 348 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 BCL9O00512 1426 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 LRP6O75581 1613 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 MYO1CO00159 1063 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 ZNF185O15231 689 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 MTIF2P46199 727 aaKnown RBP8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 HERVK_113P62684 666 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 MRPS25P82663 173 aaKnown RBP8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 WDR59Q6PJI9 974 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 SMIM5Q71RC9 77 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 RIN2Q8WYP3 895 aaPredicted RBP8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 LACRTQ9GZZ8 138 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 STRCP1A6NGW2 1772 aa8.44□□□□□ -1.06
SMARCC1-202ENST00000425518 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 ERCC3P19447 782 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 PRDX5P30044 214 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 USP14P54578 494 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 KRT83P78385 493 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 NAALADL2Q58DX5 795 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 TRAPPC11Q7Z392 1133 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 DYNLL2Q96FJ2 89 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 TUBGCP2Q9BSJ2 902 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 MINPP1Q9UNW1 487 aa8.43□□□□□ -1.06
SMARCC1-202ENST00000425518 UBR2Q8IWV8 1755 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms