RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 OLFML2BQ68BL8 750 aa8.75□□□□□ -1.01
LINC01040-201ENST00000425048 PANK1Q8TE04 598 aa8.75□□□□□ -1.01
LINC01040-201ENST00000425048 ZNF296Q8WUU4 475 aaPredicted RBP8.75□□□□□ -1.01
LINC01040-201ENST00000425048 ATG4CQ96DT6 458 aa8.75□□□□□ -1.01
LINC01040-201ENST00000425048 PRDM14Q9GZV8 571 aa8.75□□□□□ -1.01
LINC01040-201ENST00000425048 N4BP3O15049 544 aa8.74□□□□□ -1.01
LINC01040-201ENST00000425048 PDIA4P13667 645 aaKnown RBP8.74□□□□□ -1.01
LINC01040-201ENST00000425048 PI3P19957 117 aa8.74□□□□□ -1.01
LINC01040-201ENST00000425048 POLR2BP30876 1174 aaKnown RBP8.74□□□□□ -1.01
LINC01040-201ENST00000425048 VIPR1P32241 457 aa8.74□□□□□ -1.01
LINC01040-201ENST00000425048 OVOS1Q6IE37 1185 aa8.74□□□□□ -1.01
LINC01040-201ENST00000425048 GALNT18Q6P9A2 607 aa8.74□□□□□ -1.01
LINC01040-201ENST00000425048 ZPBP2Q6X784 338 aa8.74□□□□□ -1.01
LINC01040-201ENST00000425048 CNTD2Q9H8S5 307 aa8.74□□□□□ -1.01
LINC01040-201ENST00000425048 WTIPA6NIX2 430 aaPredicted RBP8.73□□□□□ -1.01
LINC01040-201ENST00000425048 ENDOUP21128 410 aaKnown RBP8.73□□□□□ -1.01
LINC01040-201ENST00000425048 FCRL2Q96LA5 508 aaPredicted RBP8.73□□□□□ -1.01
LINC01040-201ENST00000425048 PLCD4Q9BRC7 762 aa8.73□□□□□ -1.01
LINC01040-201ENST00000425048 CHST7Q9NS84 486 aa8.73□□□□□ -1.01
LINC01040-201ENST00000425048 FADS2P1A8MWK0 482 aa8.72□□□□□ -1.01
LINC01040-201ENST00000425048 FOXD2O60548 495 aaPredicted RBP8.72□□□□□ -1.01
LINC01040-201ENST00000425048 MPOP05164 745 aa8.72□□□□□ -1.01
LINC01040-201ENST00000425048 SDHBP21912 280 aa8.72□□□□□ -1.01
LINC01040-201ENST00000425048 ARL4AP40617 200 aa8.72□□□□□ -1.01
LINC01040-201ENST00000425048 ERVFRD-1P60508 538 aa8.72□□□□□ -1.01
LINC01040-201ENST00000425048 LRRFIP1Q32MZ4 808 aaKnown RBP8.72□□□□□ -1.01
LINC01040-201ENST00000425048 NLRC3Q7RTR2 1065 aa8.72□□□□□ -1.01
LINC01040-201ENST00000425048 REXO1Q8N1G1 1221 aaKnown RBP8.72□□□□□ -1.01
LINC01040-201ENST00000425048 DACT3Q96B18 629 aaPredicted RBP8.72□□□□□ -1.01
LINC01040-201ENST00000425048 TRIM13O60858 407 aa8.71□□□□□ -1.02
LINC01040-201ENST00000425048 SASH1O94885 1247 aa8.71□□□□□ -1.02
LINC01040-201ENST00000425048 AFF3P51826 1226 aaKnown RBP8.71□□□□□ -1.02
LINC01040-201ENST00000425048 EPHB3P54753 998 aa8.71□□□□□ -1.02
LINC01040-201ENST00000425048 LAPTM5Q13571 262 aa8.71□□□□□ -1.02
LINC01040-201ENST00000425048 SEZ6Q53EL9 994 aa8.71□□□□□ -1.02
LINC01040-201ENST00000425048 ZNF512BQ96KM6 892 aaPredicted RBP8.71□□□□□ -1.02
LINC01040-201ENST00000425048 TAF6LQ9Y6J9 622 aa8.71□□□□□ -1.02
LINC01040-201ENST00000425048 A0A0G2JLL6 359 aaPredicted RBP8.7□□□□□ -1.02
LINC01040-201ENST00000425048 MCM4P33991 863 aa8.7□□□□□ -1.02
LINC01040-201ENST00000425048 CRKP46108 304 aa8.7□□□□□ -1.02
LINC01040-201ENST00000425048 ZNF165P49910 485 aa8.7□□□□□ -1.02
LINC01040-201ENST00000425048 CLCQ05315 142 aa8.7□□□□□ -1.02
LINC01040-201ENST00000425048 TMEM62Q0P6H9 643 aa8.7□□□□□ -1.02
LINC01040-201ENST00000425048 HSF5Q4G112 596 aaPredicted RBP8.7□□□□□ -1.02
LINC01040-201ENST00000425048 GK5Q6ZS86 529 aa8.7□□□□□ -1.02
LINC01040-201ENST00000425048 GGT7Q9UJ14 662 aa8.7□□□□□ -1.02
LINC01040-201ENST00000425048 FBXL21Q9UKT6 434 aa8.7□□□□□ -1.02
LINC01040-201ENST00000425048 MINPP1Q9UNW1 487 aa8.7□□□□□ -1.02
LINC01040-201ENST00000425048 NFIXQ14938 502 aa8.69□□□□□ -1.02
LINC01040-201ENST00000425048 MZB1Q8WU39 189 aa8.69□□□□□ -1.02
LINC01040-201ENST00000425048 MKRN2Q9H000 416 aaKnown RBP8.69□□□□□ -1.02
LINC01040-201ENST00000425048 UBP1Q9NZI7 540 aa8.69□□□□□ -1.02
LINC01040-201ENST00000425048 KLHL14Q9P2G3 628 aa8.69□□□□□ -1.02
LINC01040-201ENST00000425048 PCDHB12Q9Y5F1 795 aa8.69□□□□□ -1.02
LINC01040-201ENST00000425048 A0A1W2PQ45 241 aaPredicted RBP8.68□□□□□ -1.02
LINC01040-201ENST00000425048 A0A1W2PQY0 241 aa8.68□□□□□ -1.02
LINC01040-201ENST00000425048 NME1P15531 152 aaKnown RBP8.68□□□□□ -1.02
LINC01040-201ENST00000425048 BMP8BP34820 402 aa8.68□□□□□ -1.02
LINC01040-201ENST00000425048 HS2ST1Q7LGA3 356 aa8.68□□□□□ -1.02
LINC01040-201ENST00000425048 TMEM192Q8IY95 271 aa8.68□□□□□ -1.02
LINC01040-201ENST00000425048 CDADC1Q9BWV3 514 aa8.68□□□□□ -1.02
LINC01040-201ENST00000425048 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
LINC01040-201ENST00000425048 GFOD1Q9NXC2 390 aa8.68□□□□□ -1.02
LINC01040-201ENST00000425048 GPR55Q9Y2T6 319 aaPredicted RBP8.68□□□□□ -1.02
LINC01040-201ENST00000425048 MEIS1O00470 390 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 IRS4O14654 1257 aaPredicted RBP8.67□□□□□ -1.02
LINC01040-201ENST00000425048 PRKCAP17252 672 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 SYN1P17600 705 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 CDR1P51861 262 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 CYP4F8P98187 520 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 APOBRQ0VD83 1088 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 KIR3DS1Q14943 382 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 KRTAP4-5Q9BYR2 181 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 EPB41L4AQ9HCS5 686 aaPredicted RBP8.67□□□□□ -1.02
LINC01040-201ENST00000425048 ERVK13-1Q9NX77 482 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 ADAMTS1Q9UHI8 967 aa8.67□□□□□ -1.02
LINC01040-201ENST00000425048 TNFRSF10CO14798 259 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 ZNF205O95201 554 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 VAV1P15498 845 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 AUHQ13825 339 aaKnown RBP8.66□□□□□ -1.02
LINC01040-201ENST00000425048 RAB3GAP1Q15042 981 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 CCDC27Q2M243 656 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 CNKSR3Q6P9H4 555 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 LDHDQ86WU2 507 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 SLC6A18Q96N87 628 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 XYLT2Q9H1B5 865 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 ANTXR1Q9H6X2 564 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 RTEL1Q9NZ71 1219 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 PRR13Q9NZ81 148 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 ACSL6Q9UKU0 697 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 ADAMTS20P59510 1910 aa8.66□□□□□ -1.02
LINC01040-201ENST00000425048 CTSKP43235 329 aa8.65□□□□□ -1.02
LINC01040-201ENST00000425048 SLCO6A1Q86UG4 719 aa8.65□□□□□ -1.02
LINC01040-201ENST00000425048 SLITRK4Q8IW52 837 aa8.65□□□□□ -1.02
LINC01040-201ENST00000425048 TMEFF1Q8IYR6 380 aa8.65□□□□□ -1.02
LINC01040-201ENST00000425048 NUP43Q8NFH3 380 aa8.65□□□□□ -1.02
LINC01040-201ENST00000425048 NKD1Q969G9 470 aa8.65□□□□□ -1.02
LINC01040-201ENST00000425048 DHRS1Q96LJ7 313 aa8.65□□□□□ -1.02
LINC01040-201ENST00000425048 OTOL1A6NHN0 477 aaPredicted RBP8.64□□□□□ -1.03
LINC01040-201ENST00000425048 MEIS3P2A8K0S8 358 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms