RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 RESTQ13127 1097 aa16.27■□□□□ 0.2
ACTN4-203ENST00000424234 SH3D19Q5HYK7 790 aa16.27■□□□□ 0.2
ACTN4-203ENST00000424234 IFFO2Q5TF58 517 aa16.27■□□□□ 0.2
ACTN4-203ENST00000424234 SPRYD7Q5W111 196 aa16.27■□□□□ 0.2
ACTN4-203ENST00000424234 PRRT2Q7Z6L0 340 aaPredicted RBP16.27■□□□□ 0.2
ACTN4-203ENST00000424234 FERMT3Q86UX7 667 aa16.27■□□□□ 0.2
ACTN4-203ENST00000424234 SPICE1Q8N0Z3 855 aa16.27■□□□□ 0.2
ACTN4-203ENST00000424234 NUP133Q8WUM0 1156 aa16.27■□□□□ 0.2
ACTN4-203ENST00000424234 C12orf42Q96LP6 360 aa16.27■□□□□ 0.2
ACTN4-203ENST00000424234 EMILIN3Q9NT22 766 aa16.27■□□□□ 0.2
ACTN4-203ENST00000424234 C19orf81C9J6K1 198 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 ZNF157P51786 506 aaPredicted RBP16.26■□□□□ 0.19
ACTN4-203ENST00000424234 USP14P54578 494 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 GRM4Q14833 912 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 SLFN13Q68D06 897 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 CCDC144CPQ8IYA2 1237 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 NSUN7Q8NE18 718 aaKnown RBP16.26■□□□□ 0.19
ACTN4-203ENST00000424234 DCAF4Q8WV16 495 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 LPAR1Q92633 364 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 MGAMO43451 1857 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 ZNFX1Q9P2E3 1918 aaKnown RBP16.26■□□□□ 0.19
ACTN4-203ENST00000424234 GOLGA8AA7E2F4 631 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 CXCL11O14625 94 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 RAD21O60216 631 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 CALM1P0DP23 149 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 CALM2P0DP24 149 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 CALM3P0DP25 149 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 VCAM1P19320 739 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 METAP2P50579 478 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■■□□□ 14
ACTN4-203ENST00000424234 MKRN3Q13064 507 aaKnown RBP16.26■□□□□ 0.19
ACTN4-203ENST00000424234 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 GMCL1Q96IK5 515 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 SPATA32Q96LK8 384 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 MAP3K14Q99558 947 aa16.26■□□□□ 0.19
ACTN4-203ENST00000424234 NUP88Q99567 741 aaPredicted RBP16.26■□□□□ 0.19
ACTN4-203ENST00000424234 FRMPD2Q68DX3 1309 aaPredicted RBP16.25■□□□□ 0.19
ACTN4-203ENST00000424234 RASSF10A6NK89 507 aa16.25■□□□□ 0.19
ACTN4-203ENST00000424234 FAM155AB1AL88 458 aaPredicted RBP16.25■□□□□ 0.19
ACTN4-203ENST00000424234 SLC1A4P43007 532 aa16.25■□□□□ 0.19
ACTN4-203ENST00000424234 CCT2P78371 535 aaKnown RBP16.25■□□□□ 0.19
ACTN4-203ENST00000424234 ZNF543Q08ER8 600 aa16.25■□□□□ 0.19
ACTN4-203ENST00000424234 MOGSQ13724 837 aa16.25■□□□□ 0.19
ACTN4-203ENST00000424234 RTN1Q16799 776 aa16.25■□□□□ 0.19
ACTN4-203ENST00000424234 FAM217BQ9NTX9 383 aaPredicted RBP16.25■□□□□ 0.19
ACTN4-203ENST00000424234 MAD2L2Q9UI95 211 aa16.25■□□□□ 0.19
ACTN4-203ENST00000424234 PTPDC1A2A3K4 754 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 WDR46O15213 610 aaKnown RBP16.24■□□□□ 0.19
ACTN4-203ENST00000424234 PARP1P09874 1014 aaKnown RBP16.24■□□□□ 0.19
ACTN4-203ENST00000424234 CDC27P30260 824 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 SNAPC2Q13487 334 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 CCDC96Q2M329 555 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 ASPRV1Q53RT3 343 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 FAM83BQ5T0W9 1011 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 DOCK3Q8IZD9 2030 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 STAG2Q8N3U4 1231 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 FANCBQ8NB91 859 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 PROCA1Q8NCQ7 364 aaPredicted RBP16.24■□□□□ 0.19
ACTN4-203ENST00000424234 CTCFLQ8NI51 663 aaPredicted RBP16.24■□□□□ 0.19
ACTN4-203ENST00000424234 LEO1Q8WVC0 666 aaPredicted RBP16.24■□□□□ 0.19
ACTN4-203ENST00000424234 MS4A4AQ96JQ5 239 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 FUCA2Q9BTY2 467 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 NCOA5Q9HCD5 579 aaKnown RBP16.24■□□□□ 0.19
ACTN4-203ENST00000424234 CCDC39Q9UFE4 941 aa16.24■□□□□ 0.19
ACTN4-203ENST00000424234 PALM3A6NDB9 673 aaPredicted RBP16.23■□□□□ 0.19
ACTN4-203ENST00000424234 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 CTDNEP1O95476 244 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 GOLGA8HP0CJ92 632 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 BMP3P12645 472 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 MSNP26038 577 aaKnown RBP16.23■□□□□ 0.19
ACTN4-203ENST00000424234 ATL3Q6DD88 541 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 KCTD1Q719H9 257 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 DDX11Q96FC9 970 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 TMOD4Q9NZQ9 345 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 CFAP45Q9UL16 551 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 PLXNB2O15031 1838 aa16.23■□□□□ 0.19
ACTN4-203ENST00000424234 LCTP09848 1927 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 PLEKHA8P1O95397 391 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 KIF5BP33176 963 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 GTF2A2P52657 109 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 TREML2Q5T2D2 321 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 GPATCH4Q5T3I0 446 aaKnown RBP16.22■□□□□ 0.19
ACTN4-203ENST00000424234 CYP4F22Q6NT55 531 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 FAM173BQ6P4H8 233 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 GADL1Q6ZQY3 521 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 TMTC3Q6ZXV5 915 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 RPAP3Q9H6T3 665 aaPredicted RBP16.22■□□□□ 0.19
ACTN4-203ENST00000424234 DDX19AQ9NUU7 478 aaKnown RBP16.22■□□□□ 0.19
ACTN4-203ENST00000424234 RBM28Q9NW13 759 aaKnown RBP16.22■□□□□ 0.19
ACTN4-203ENST00000424234 CNTNAP5Q8WYK1 1306 aa16.22■□□□□ 0.19
ACTN4-203ENST00000424234 PAXIP1Q6ZW49 1069 aaPredicted RBP16.21■□□□□ 0.19
ACTN4-203ENST00000424234 BRI3BPQ8WY22 251 aa16.21■□□□□ 0.19
ACTN4-203ENST00000424234 CCDC102AQ96A19 550 aa16.21■□□□□ 0.19
ACTN4-203ENST00000424234 GPCPD1Q9NPB8 672 aa16.21■□□□□ 0.19
ACTN4-203ENST00000424234 NOL7Q9UMY1 257 aaKnown RBP16.21■□□□□ 0.19
ACTN4-203ENST00000424234 AGTPBP1Q9UPW5 1226 aa16.21■□□□□ 0.19
ACTN4-203ENST00000424234 PLXNA1Q9UIW2 1896 aa16.21■□□□□ 0.19
ACTN4-203ENST00000424234 CCL15-CCL14A0A0B4J2E2 113 aa16.21■□□□□ 0.18
ACTN4-203ENST00000424234 CCDC192P0DO97 292 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms