RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 SLC16A2P36021 539 aa18.48■□□□□ 0.55
ABCA1-203ENST00000423487 ZNF157P51786 506 aaPredicted RBP18.48■□□□□ 0.55
ABCA1-203ENST00000423487 GTF2A2P52657 109 aa18.48■□□□□ 0.55
ABCA1-203ENST00000423487 SYDE2Q5VT97 1194 aa18.48■□□□□ 0.55
ABCA1-203ENST00000423487 ADGRF4Q8IZF3 695 aa18.48■□□□□ 0.55
ABCA1-203ENST00000423487 RRP36Q96EU6 259 aaKnown RBP18.48■□□□□ 0.55
ABCA1-203ENST00000423487 TANGO6Q9C0B7 1094 aa18.48■□□□□ 0.55
ABCA1-203ENST00000423487 VAT1LQ9HCJ6 419 aa18.48■□□□□ 0.55
ABCA1-203ENST00000423487 PDCP20941 246 aa18.47■□□□□ 0.55
ABCA1-203ENST00000423487 SLC35G1Q2M3R5 365 aa18.47■□□□□ 0.55
ABCA1-203ENST00000423487 GADL1Q6ZQY3 521 aa18.47■□□□□ 0.55
ABCA1-203ENST00000423487 HHIPL1Q96JK4 782 aa18.47■□□□□ 0.55
ABCA1-203ENST00000423487 JMJD4Q9H9V9 463 aa18.47■□□□□ 0.55
ABCA1-203ENST00000423487 SEC63Q9UGP8 760 aaKnown RBP18.47■□□□□ 0.55
ABCA1-203ENST00000423487 USP17L15C9J2P7 530 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 USP17L13C9JLJ4 530 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 USP17L11C9JVI0 530 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 USP17L18D6R9N7 530 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 USP17L22D6RA61 530 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 USP17L17D6RBQ6 530 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 USP17L19D6RCP7 530 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 USP17L20D6RJB6 530 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 CETPP11597 493 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 USP17L24Q0WX57 530 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 RASAL3Q86YV0 1011 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 PRPF38AQ8NAV1 312 aaKnown RBP18.46■□□□□ 0.55
ABCA1-203ENST00000423487 SLF1Q9BQI6 1058 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 PRR12Q9ULL5 1215 aa18.46■□□□□ 0.55
ABCA1-203ENST00000423487 FLOT1O75955 427 aa18.45■□□□□ 0.54
ABCA1-203ENST00000423487 PDIA4P13667 645 aaKnown RBP18.45■□□□□ 0.54
ABCA1-203ENST00000423487 CATSPERGQ6ZRH7 1159 aa18.45■□□□□ 0.54
ABCA1-203ENST00000423487 HOMER1Q86YM7 354 aa18.45■□□□□ 0.54
ABCA1-203ENST00000423487 PIBF1Q8WXW3 757 aa18.45■□□□□ 0.54
ABCA1-203ENST00000423487 CCDC102AQ96A19 550 aa18.45■□□□□ 0.54
ABCA1-203ENST00000423487 KIFC2Q96AC6 838 aa18.45■□□□□ 0.54
ABCA1-203ENST00000423487 PIGSQ96S52 555 aa18.45■□□□□ 0.54
ABCA1-203ENST00000423487 SCG2P13521 617 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 HOXA7P31268 230 aaPredicted RBP18.44■□□□□ 0.54
ABCA1-203ENST00000423487 APLP1P51693 650 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 MKRN3Q13064 507 aaKnown RBP18.44■□□□□ 0.54
ABCA1-203ENST00000423487 PABPC4Q13310 644 aaKnown RBP eCLIP18.44■□□□□ 0.54
ABCA1-203ENST00000423487 PKN1Q16512 942 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 PFKFB3Q16875 520 aaPredicted RBP18.44■□□□□ 0.54
ABCA1-203ENST00000423487 LARP1BQ659C4 914 aaKnown RBP18.44■□□□□ 0.54
ABCA1-203ENST00000423487 MTMR8Q96EF0 704 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 MS4A4AQ96JQ5 239 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 ALG1Q9BT22 464 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 FBXO28Q9NVF7 368 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 AGTPBP1Q9UPW5 1226 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 PNMA6FA0A0J9YX94 578 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 hCG_1642624A0A1W2PR95 340 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 ZBTB5O15062 677 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 SLC10A3P09131 477 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 FDX1P10109 184 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 XBP1P17861 261 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 MOGSQ13724 837 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 COG2Q14746 738 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 TREML2Q5T2D2 321 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 CREBZFQ9NS37 354 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 PPP1R9AQ9ULJ8 1098 aa18.44■□□□□ 0.54
ABCA1-203ENST00000423487 MYPNQ86TC9 1320 aa18.43■□□□□ 0.54
ABCA1-203ENST00000423487 CCL15-CCL14A0A0B4J2E2 113 aa18.43■□□□□ 0.54
ABCA1-203ENST00000423487 hCG_1984214I3L0E3 225 aa18.43■□□□□ 0.54
ABCA1-203ENST00000423487 CDC37Q16543 378 aaPredicted RBP18.43■□□□□ 0.54
ABCA1-203ENST00000423487 CCL15Q16663 113 aa18.43■□□□□ 0.54
ABCA1-203ENST00000423487 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
ABCA1-203ENST00000423487 ZNF713Q8N859 430 aaPredicted RBP18.43■□□□□ 0.54
ABCA1-203ENST00000423487 C8orf76Q96K31 380 aa18.43■□□□□ 0.54
ABCA1-203ENST00000423487 HOXC10Q9NYD6 342 aa18.43■□□□□ 0.54
ABCA1-203ENST00000423487 SYT1P21579 422 aa18.42■□□□□ 0.54
ABCA1-203ENST00000423487 DSG3P32926 999 aa18.42■□□□□ 0.54
ABCA1-203ENST00000423487 DDIT3P35638 169 aa18.42■□□□□ 0.54
ABCA1-203ENST00000423487 TRIM29Q14134 588 aa18.42■□□□□ 0.54
ABCA1-203ENST00000423487 QRICH1Q2TAL8 776 aa18.42■□□□□ 0.54
ABCA1-203ENST00000423487 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
ABCA1-203ENST00000423487 RANBP17Q9H2T7 1088 aaKnown RBP18.42■□□□□ 0.54
ABCA1-203ENST00000423487 CIZ1Q9ULV3 898 aaPredicted RBP18.42■□□□□ 0.54
ABCA1-203ENST00000423487 CTDP1Q9Y5B0 961 aaPredicted RBP18.42■□□□□ 0.54
ABCA1-203ENST00000423487 PTPRFP10586 1907 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 MANSC4A6NHS7 340 aaPredicted RBP18.41■□□□□ 0.54
ABCA1-203ENST00000423487 H3BQV1 296 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 OSBPP22059 807 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 IRX3P78415 501 aaPredicted RBP18.41■□□□□ 0.54
ABCA1-203ENST00000423487 TRAF1Q13077 416 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 IFFO2Q5TF58 517 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 GPAT2Q6NUI2 795 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 HEATR3Q7Z4Q2 680 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 FAM177A1Q8N128 213 aaPredicted RBP18.41■□□□□ 0.54
ABCA1-203ENST00000423487 BRI3BPQ8WY22 251 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 AIFM3Q96NN9 605 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 SH3GLB2Q9NR46 395 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 SLC45A1Q9Y2W3 748 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 LOC285556D6RIA3 1793 aa18.41■□□□□ 0.54
ABCA1-203ENST00000423487 STX6O43752 255 aa18.4■□□□□ 0.54
ABCA1-203ENST00000423487 ZBED4O75132 1171 aa18.4■□□□□ 0.54
ABCA1-203ENST00000423487 NUCB2P80303 420 aa18.4■□□□□ 0.54
ABCA1-203ENST00000423487 PAXIP1Q6ZW49 1069 aaPredicted RBP18.4■□□□□ 0.54
ABCA1-203ENST00000423487 ANKRD23Q86SG2 305 aa18.4■□□□□ 0.54
ABCA1-203ENST00000423487 CCDC12Q8WUD4 166 aaPredicted RBP18.4■□□□□ 0.54
ABCA1-203ENST00000423487 AMNQ9BXJ7 453 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms