RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 VPS54Q9P1Q0 977 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 SYNPO2Q9UMS6 1093 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 DDX49Q9Y6V7 483 aaKnown RBP10.37□□□□□ -0.75
HPS4-204ENST00000422379 PRPF40AO75400 957 aaKnown RBP10.37□□□□□ -0.75
HPS4-204ENST00000422379 BMP3P12645 472 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 BACE1P56817 501 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 RESTQ13127 1097 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 MKRN4PQ13434 485 aaPredicted RBP10.37□□□□□ -0.75
HPS4-204ENST00000422379 PFKFB3Q16875 520 aaPredicted RBP10.37□□□□□ -0.75
HPS4-204ENST00000422379 FOXD4L6Q3SYB3 417 aaPredicted RBP10.37□□□□□ -0.75
HPS4-204ENST00000422379 PPP4R3BQ5MIZ7 849 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 WWC2Q6AWC2 1192 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 CPLX2Q6PUV4 134 aaKnown RBP10.37□□□□□ -0.75
HPS4-204ENST00000422379 FOXD4L3Q6VB84 417 aaPredicted RBP10.37□□□□□ -0.75
HPS4-204ENST00000422379 HOMER1Q86YM7 354 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 MTMR8Q96EF0 704 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 GINM1Q9NU53 330 aa10.37□□□□□ -0.75
HPS4-204ENST00000422379 FSD2A1L4K1 749 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 TMEM232C9JQI7 657 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 IRF6O14896 467 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 DEXIO95424 95 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 VCAM1P19320 739 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 HMGCS2P54868 508 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 TTLL12Q14166 644 aaPredicted RBP10.36□□□□□ -0.75
HPS4-204ENST00000422379 NOM1Q5C9Z4 860 aaKnown RBP10.36□□□□□ -0.75
HPS4-204ENST00000422379 GPATCH4Q5T3I0 446 aaKnown RBP10.36□□□□□ -0.75
HPS4-204ENST00000422379 KRT40Q6A162 431 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 CHADLQ6NUI6 762 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 OXER1Q8TDS5 423 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 WNK4Q96J92 1243 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 C8orf76Q96K31 380 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 FEZ1Q99689 392 aa10.36□□□□□ -0.75
HPS4-204ENST00000422379 CELF2O95319 508 aaKnown RBP10.35□□□□□ -0.75
HPS4-204ENST00000422379 F13A1P00488 732 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 SCG2P13521 617 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 IREB2P48200 963 aaKnown RBP10.35□□□□□ -0.75
HPS4-204ENST00000422379 GNAQP50148 359 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 MOGSQ13724 837 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 BTNL9Q6UXG8 535 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 ANKRD13AQ8IZ07 590 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 OTUD5Q96G74 571 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 ISY1Q9ULR0 285 aaKnown RBP10.35□□□□□ -0.75
HPS4-204ENST00000422379 SPDYE5A6NIY4 337 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 STXBP3O00186 592 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 PDCP20941 246 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 SMARCA1P28370 1054 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 NF2P35240 595 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 EARS2Q5JPH6 523 aaKnown RBP10.35□□□□□ -0.75
HPS4-204ENST00000422379 GPT2Q8TD30 523 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 LZTS2Q9BRK4 669 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 GPBP1L1Q9HC44 474 aaPredicted RBP10.35□□□□□ -0.75
HPS4-204ENST00000422379 PRR12Q9ULL5 1215 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 CSADQ9Y600 493 aa10.35□□□□□ -0.75
HPS4-204ENST00000422379 PASKQ96RG2 1323 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 PTPRFP10586 1907 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 GOLGA6L3A6NEY3 463 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 FAM205CA6NFA0 338 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 KIF23Q02241 960 aaPredicted RBP10.34□□□□□ -0.75
HPS4-204ENST00000422379 NR5A1Q13285 461 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 QRICH1Q2TAL8 776 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 TREML2Q5T2D2 321 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 SYDE2Q5VT97 1194 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 HEATR3Q7Z4Q2 680 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 COA7Q96BR5 231 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 OPTNQ96CV9 577 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 PHF20Q9BVI0 1012 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 FTOQ9C0B1 505 aaKnown RBP eCLIP10.34□□□□□ -0.75
HPS4-204ENST00000422379 RPAP3Q9H6T3 665 aaPredicted RBP10.34□□□□□ -0.75
HPS4-204ENST00000422379 GBA2Q9HCG7 927 aaPredicted RBP10.34□□□□□ -0.75
HPS4-204ENST00000422379 RLFQ13129 1914 aa10.34□□□□□ -0.75
HPS4-204ENST00000422379 BTBD18B2RXH4 712 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 H3BQV1 296 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 MMP1P03956 469 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 STAT2P52630 851 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 CDC37Q16543 378 aaPredicted RBP10.33□□□□□ -0.76
HPS4-204ENST00000422379 SH3D19Q5HYK7 790 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 L1TD1Q5T7N2 865 aaKnown RBP10.33□□□□□ -0.76
HPS4-204ENST00000422379 IFFO2Q5TF58 517 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 ARMC9Q7Z3E5 817 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 ERO1BQ86YB8 467 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 TNFRSF25Q93038 417 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 KIFC2Q96AC6 838 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 C12orf42Q96LP6 360 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 SH2D4AQ9H788 454 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 GDPD2Q9HCC8 539 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 BARHL2Q9NY43 387 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 MYH6P13533 1939 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 WNT7AO00755 349 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 OPLAHO14841 1288 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 ZBTB5O15062 677 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 WDR46O15213 610 aaKnown RBP10.33□□□□□ -0.76
HPS4-204ENST00000422379 PEX10O60683 326 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 NCLP19338 710 aaKnown RBP10.33□□□□□ -0.76
HPS4-204ENST00000422379 DNM1Q05193 864 aaKnown RBP10.33□□□□□ -0.76
HPS4-204ENST00000422379 PPATQ06203 517 aa10.33□□□□□ -0.76
HPS4-204ENST00000422379 CAVIN1Q6NZI2 390 aaKnown RBP10.33□□□□□ -0.76
HPS4-204ENST00000422379 LPAR1Q92633 364 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms