RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 KIAA1755Q5JYT7 1200 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 HLA-CQ95604 372 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 VTI1AQ96AJ9 217 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 PPP1R12CQ9BZL4 782 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 C11orf16Q9NQ32 467 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 PPP1R9AQ9ULJ8 1098 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 SMCHD1A6NHR9 2005 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 SMIM22K7EJ46 135 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 APBB1O00213 710 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 MPHOSPH10O00566 681 aaKnown RBP8.06□□□□□ -1.12
PMS1-208ENST00000421722 ZEB2O60315 1214 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 GNAI2P04899 355 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 PGK2P07205 417 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 PLCD1P51178 756 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 TFF2Q03403 129 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 ACVR2BQ13705 512 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 SKIV2LQ15477 1246 aaKnown RBP8.06□□□□□ -1.12
PMS1-208ENST00000421722 SLC9A7Q96T83 725 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 DBNDD2Q9BQY9 259 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 NOC4LQ9BVI4 516 aaKnown RBP8.06□□□□□ -1.12
PMS1-208ENST00000421722 CRNKL1Q9BZJ0 848 aaKnown RBP8.06□□□□□ -1.12
PMS1-208ENST00000421722 ABHD16BQ9H3Z7 469 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 HIPK3Q9H422 1215 aa8.06□□□□□ -1.12
PMS1-208ENST00000421722 TCF20Q9UGU0 1960 aaKnown RBP8.06□□□□□ -1.12
PMS1-208ENST00000421722 MYADML2A6NDP7 307 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 VWA5AO00534 786 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 ATP2A1O14983 1001 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 ACTN1P12814 892 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 TMEM67Q5HYA8 995 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 SIAH1Q8IUQ4 282 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 MICALL1Q8N3F8 863 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 SNX27Q96L92 541 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 RIOK1Q9BRS2 568 aaKnown RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 GOPCQ9HD26 462 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 ZHX1Q9UKY1 873 aaPredicted RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 COL11A1P12107 1806 aaPredicted RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 TTC28Q96AY4 2481 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 MYO5AQ9Y4I1 1855 aaKnown RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 MAGEB6P1A0A0J9YX57 407 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 C6orf222P0C671 652 aaPredicted RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 ATP2A2P16615 1042 aaKnown RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 MRE11P49959 708 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 ICA1Q05084 483 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 POLA2Q14181 598 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 PUS10Q3MIT2 529 aaKnown RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 TRMT2AQ8IZ69 625 aaKnown RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 MIGA1Q8NAN2 632 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 LENG1Q96BZ8 264 aaPredicted RBP8.05□□□□□ -1.12
PMS1-208ENST00000421722 FBXO40Q9UH90 709 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 Q9Y3F1 56 aa8.05□□□□□ -1.12
PMS1-208ENST00000421722 CTAGE5O15320 804 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 ALADP13716 330 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 RABGGTBP53611 331 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 GNASQ5JWF2 1037 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 DDX11Q96FC9 970 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 CDCA7LQ96GN5 454 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 TEX13BQ9BXU2 312 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 PLSCR2Q9NRY7 297 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 IDH1O75874 414 aaKnown RBP8.04□□□□□ -1.12
PMS1-208ENST00000421722 TTF1Q15361 905 aaPredicted RBP8.04□□□□□ -1.12
PMS1-208ENST00000421722 CHST13Q8NET6 341 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 KANSL2Q9H9L4 492 aa8.04□□□□□ -1.12
PMS1-208ENST00000421722 KIF28PB7ZC32 967 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 ANP32CO43423 234 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 SUPT20HL2P0C7V6 817 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 OAZ1P54368 228 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 ITGA7Q13683 1181 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 CCDC144BQ3MJ40 725 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 LEXMQ3ZCV2 418 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 OTOP2Q7RTS6 562 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 AGBL1Q96MI9 1066 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 SLF1Q9BQI6 1058 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 KATNBL1Q9H079 304 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 WNT8AQ9H1J5 351 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 MCM9Q9NXL9 1143 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 NOP58Q9Y2X3 529 aaKnown RBP8.03□□□□□ -1.12
PMS1-208ENST00000421722 ZBED4O75132 1171 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 FDX1P10109 184 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 AKR1B1P15121 316 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 TAP1Q03518 808 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 SSH3Q8TE77 659 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 AP5M1Q9H0R1 490 aa8.03□□□□□ -1.12
PMS1-208ENST00000421722 MYH8P13535 1937 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.02□□□□□ -1.13
PMS1-208ENST00000421722 PNMA6EA0A0J9YXQ4 647 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 ASB14A6NK59 587 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 ZBBXA8MT70 800 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 IPO8O15397 1037 aaKnown RBP8.02□□□□□ -1.13
PMS1-208ENST00000421722 BAIAP3O94812 1187 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 ATP8B2P98198 1209 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 TNFAIP2Q03169 654 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 GRB10Q13322 594 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 OS9Q13438 667 aaPredicted RBP8.02□□□□□ -1.13
PMS1-208ENST00000421722 ARMCX2Q7L311 632 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 VWCEQ96DN2 955 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 FGD4Q96M96 766 aa8.02□□□□□ -1.13
PMS1-208ENST00000421722 DCP1AQ9NPI6 582 aaPredicted RBP8.02□□□□□ -1.13
PMS1-208ENST00000421722 ATP8A2Q9NTI2 1148 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms