RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 BRD1O95696 1058 aa24.9■■□□□ 1.58
ABCF3-202ENST00000421340 HMGCS2P54868 508 aa24.9■■□□□ 1.58
ABCF3-202ENST00000421340 SYDE2Q5VT97 1194 aa24.9■■□□□ 1.58
ABCF3-202ENST00000421340 PRRT2Q7Z6L0 340 aaPredicted RBP24.9■■□□□ 1.58
ABCF3-202ENST00000421340 PROCA1Q8NCQ7 364 aaPredicted RBP24.9■■□□□ 1.58
ABCF3-202ENST00000421340 OTUD5Q96G74 571 aa24.9■■□□□ 1.58
ABCF3-202ENST00000421340 C8orf76Q96K31 380 aa24.9■■□□□ 1.58
ABCF3-202ENST00000421340 SEC63Q9UGP8 760 aaKnown RBP24.9■■□□□ 1.58
ABCF3-202ENST00000421340 OTOFQ9HC10 1997 aa24.89■■□□□ 1.58
ABCF3-202ENST00000421340 SLC16A2P36021 539 aa24.89■■□□□ 1.58
ABCF3-202ENST00000421340 CNKSR2Q8WXI2 1034 aa24.89■■□□□ 1.58
ABCF3-202ENST00000421340 CPVLQ9H3G5 476 aa24.89■■□□□ 1.58
ABCF3-202ENST00000421340 VAT1LQ9HCJ6 419 aa24.89■■□□□ 1.58
ABCF3-202ENST00000421340 ISY1Q9ULR0 285 aaKnown RBP24.89■■□□□ 1.58
ABCF3-202ENST00000421340 MTMR6Q9Y217 621 aa24.89■■□□□ 1.58
ABCF3-202ENST00000421340 PHIPQ8WWQ0 1821 aa24.89■■□□□ 1.57
ABCF3-202ENST00000421340 H3BQV1 296 aa24.88■■□□□ 1.57
ABCF3-202ENST00000421340 ZBTB5O15062 677 aa24.88■■□□□ 1.57
ABCF3-202ENST00000421340 FDX1P10109 184 aa24.88■■□□□ 1.57
ABCF3-202ENST00000421340 TRIM29Q14134 588 aa24.88■■□□□ 1.57
ABCF3-202ENST00000421340 IFFO2Q5TF58 517 aa24.88■■□□□ 1.57
ABCF3-202ENST00000421340 PRPF38AQ8NAV1 312 aaKnown RBP24.88■■□□□ 1.57
ABCF3-202ENST00000421340 ZNF784Q8NCA9 323 aaPredicted RBP24.88■■□□□ 1.57
ABCF3-202ENST00000421340 PIGSQ96S52 555 aa24.88■■□□□ 1.57
ABCF3-202ENST00000421340 RPAP3Q9H6T3 665 aaPredicted RBP24.88■■□□□ 1.57
ABCF3-202ENST00000421340 PRR12Q9ULL5 1215 aa24.88■■□□□ 1.57
ABCF3-202ENST00000421340 ZSCAN22P10073 491 aaPredicted RBP24.87■■□□□ 1.57
ABCF3-202ENST00000421340 ZBTB48P10074 688 aaPredicted RBP24.87■■□□□ 1.57
ABCF3-202ENST00000421340 TRAF1Q13077 416 aa24.87■■□□□ 1.57
ABCF3-202ENST00000421340 IKQ13123 557 aaPredicted RBP24.87■■□□□ 1.57
ABCF3-202ENST00000421340 SNAPC2Q13487 334 aa24.87■■□□□ 1.57
ABCF3-202ENST00000421340 FASTKD5Q7L8L6 764 aaKnown RBP24.87■■□□□ 1.57
ABCF3-202ENST00000421340 WNK4Q96J92 1243 aa24.87■■□□□ 1.57
ABCF3-202ENST00000421340 ZDHHC9Q9Y397 364 aa24.87■■□□□ 1.57
ABCF3-202ENST00000421340 USP17L15C9J2P7 530 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 USP17L13C9JLJ4 530 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 USP17L11C9JVI0 530 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 USP17L18D6R9N7 530 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 USP17L22D6RA61 530 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 USP17L17D6RBQ6 530 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 USP17L19D6RCP7 530 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 USP17L20D6RJB6 530 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 HOXA7P31268 230 aaPredicted RBP24.86■■□□□ 1.57
ABCF3-202ENST00000421340 HUNKP57058 714 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 USP17L24Q0WX57 530 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 CATSPERGQ6ZRH7 1159 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 AIFM3Q96NN9 605 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 SLF1Q9BQI6 1058 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 BARHL2Q9NY43 387 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 MYPNQ86TC9 1320 aa24.86■■□□□ 1.57
ABCF3-202ENST00000421340 hCG_1642624A0A1W2PR95 340 aa24.85■■□□□ 1.57
ABCF3-202ENST00000421340 GJA5P36382 358 aa24.85■■□□□ 1.57
ABCF3-202ENST00000421340 PKP1Q13835 747 aa24.85■■□□□ 1.57
ABCF3-202ENST00000421340 KRT40Q6A162 431 aa24.85■■□□□ 1.57
ABCF3-202ENST00000421340 SAPCD2Q86UD0 394 aa24.85■■□□□ 1.57
ABCF3-202ENST00000421340 CCDC12Q8WUD4 166 aaPredicted RBP24.85■■□□□ 1.57
ABCF3-202ENST00000421340 TANGO6Q9C0B7 1094 aa24.85■■□□□ 1.57
ABCF3-202ENST00000421340 RANBP17Q9H2T7 1088 aaKnown RBP24.85■■□□□ 1.57
ABCF3-202ENST00000421340 GTF2A2P52657 109 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 DGKZQ13574 1117 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 COG2Q14746 738 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 SPRYD7Q5W111 196 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 GALNT17Q6IS24 598 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 HOMER1Q86YM7 354 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 HHIPL1Q96JK4 782 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 HOXC10Q9NYD6 342 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 PNMA2Q9UL42 364 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 PPP1R9AQ9ULJ8 1098 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 TLL2Q9Y6L7 1015 aa24.84■■□□□ 1.57
ABCF3-202ENST00000421340 VPS37CA5D8V6 355 aaPredicted RBP24.83■■□□□ 1.57
ABCF3-202ENST00000421340 FLOT1O75955 427 aa24.83■■□□□ 1.57
ABCF3-202ENST00000421340 CDC37Q16543 378 aaPredicted RBP24.83■■□□□ 1.57
ABCF3-202ENST00000421340 QRICH1Q2TAL8 776 aa24.83■■□□□ 1.57
ABCF3-202ENST00000421340 WWC2Q6AWC2 1192 aa24.83■■□□□ 1.57
ABCF3-202ENST00000421340 PPP1R18Q6NYC8 613 aa24.83■■□□□ 1.57
ABCF3-202ENST00000421340 CCDC148Q8NFR7 591 aa24.83■■□□□ 1.57
ABCF3-202ENST00000421340 PIBF1Q8WXW3 757 aa24.83■■□□□ 1.57
ABCF3-202ENST00000421340 KIFC2Q96AC6 838 aa24.83■■□□□ 1.57
ABCF3-202ENST00000421340 PHF20Q9BVI0 1012 aa24.83■■□□□ 1.57
ABCF3-202ENST00000421340 ZSCAN16Q9H4T2 348 aaPredicted RBP24.83■■□□□ 1.57
ABCF3-202ENST00000421340 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.83■■□□□ 1.57
ABCF3-202ENST00000421340 ADAMTS5Q9UNA0 930 aa24.83■■□□□ 1.57
ABCF3-202ENST00000421340 TRPM7Q96QT4 1865 aa24.83■■□□□ 1.56
ABCF3-202ENST00000421340 TMEM88BA6NKF7 163 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 STXBP3O00186 592 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 MMP1P03956 469 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 CETPP11597 493 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 CALML3P27482 149 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 DSG3P32926 999 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 PABPC4Q13310 644 aaKnown RBP eCLIP24.82■■□□□ 1.56
ABCF3-202ENST00000421340 MOGSQ13724 837 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 SAFBQ15424 915 aaKnown RBP eCLIP24.82■■□□□ 1.56
ABCF3-202ENST00000421340 TEX2Q8IWB9 1127 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 AMNQ9BXJ7 453 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 FBXO28Q9NVF7 368 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 VPS54Q9P1Q0 977 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 AGTPBP1Q9UPW5 1226 aa24.82■■□□□ 1.56
ABCF3-202ENST00000421340 ESYT2A0FGR8 921 aa24.81■■□□□ 1.56
ABCF3-202ENST00000421340 F13A1P00488 732 aa24.81■■□□□ 1.56
ABCF3-202ENST00000421340 RGMBQ6NW40 437 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms