RNA–Protein interactions for RNA: ENST00000421164.5

AFG3L1P-204, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, humanhuman

TSL 1 (best)

Gene AFG3L1P, Length 1,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFG3L1P-204ENST00000421164 STAT2P52630 851 aa20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 IKQ13123 557 aaPredicted RBP20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 FASTKD5Q7L8L6 764 aaKnown RBP20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 SMARCC2Q8TAQ2 1214 aa20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 DDX11Q96FC9 970 aa20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 SPZ1Q9BXG8 430 aa20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 RIOX1Q9H6W3 641 aa20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 FEM1BQ9UK73 627 aa20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 PRR12Q9ULL5 1215 aa20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 AGTPBP1Q9UPW5 1226 aa20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 V9GY48 417 aaPredicted RBP20.24■□□□□ 0.83
AFG3L1P-204ENST00000421164 USP17L15C9J2P7 530 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 BTBD19C9JJ37 291 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 USP17L13C9JLJ4 530 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 USP17L11C9JVI0 530 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 USP17L18D6R9N7 530 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 USP17L22D6RA61 530 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 USP17L17D6RBQ6 530 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 USP17L19D6RCP7 530 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 USP17L20D6RJB6 530 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 PLA2G6O60733 806 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 FLOT1O75955 427 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 USP17L24Q0WX57 530 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 SYDE2Q5VT97 1194 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 LZTS2Q9BRK4 669 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 SLC26A6Q9BXS9 759 aa20.23■□□□□ 0.83
AFG3L1P-204ENST00000421164 HOXA7P31268 230 aaPredicted RBP20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 CHURC1Q8WUH1 139 aa20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 PIGSQ96S52 555 aa20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 LLPHQ9BRT6 129 aaKnown RBP20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 LOC285556D6RIA3 1793 aa20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 TESPA1A2RU30 521 aaPredicted RBP20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 FMNL1O95466 1100 aaPredicted RBP20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 SMARCA1P28370 1054 aa20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 POTEEQ6S8J3 1075 aa20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 INTS4Q96HW7 963 aaKnown RBP20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 CAPNS2Q96L46 248 aa20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 SLF1Q9BQI6 1058 aa20.22■□□□□ 0.83
AFG3L1P-204ENST00000421164 BAZ2BQ9UIF8 2168 aaKnown RBP20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 AOC2O75106 756 aa20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 SSRP1Q08945 709 aaKnown RBP20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 COG2Q14746 738 aa20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 PKN1Q16512 942 aa20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 FAM160B2Q86V87 743 aa20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 HOMER1Q86YM7 354 aa20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 PRPF38AQ8NAV1 312 aaKnown RBP20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 MTMR8Q96EF0 704 aa20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 AIFM3Q96NN9 605 aa20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 P2RX7Q99572 595 aaKnown RBP20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 ASCC2Q9H1I8 757 aaPredicted RBP20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 PPP1R9AQ9ULJ8 1098 aa20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.21■□□□□ 0.83
AFG3L1P-204ENST00000421164 MANSC4A6NHS7 340 aaPredicted RBP20.2■□□□□ 0.82
AFG3L1P-204ENST00000421164 PRPF3O43395 683 aaKnown RBP20.2■□□□□ 0.82
AFG3L1P-204ENST00000421164 CDKL5O76039 1030 aa20.2■□□□□ 0.82
AFG3L1P-204ENST00000421164 GJB2P29033 226 aa20.2■□□□□ 0.82
AFG3L1P-204ENST00000421164 DSG3P32926 999 aa20.2■□□□□ 0.82
AFG3L1P-204ENST00000421164 KIF23Q02241 960 aaPredicted RBP20.2■□□□□ 0.82
AFG3L1P-204ENST00000421164 ATG4CQ96DT6 458 aa20.2■□□□□ 0.82
AFG3L1P-204ENST00000421164 IPO9Q96P70 1041 aaKnown RBP20.2■□□□□ 0.82
AFG3L1P-204ENST00000421164 ORC3Q9UBD5 711 aaPredicted RBP20.2■□□□□ 0.82
AFG3L1P-204ENST00000421164 PDHXO00330 501 aa20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 IGF2BP3O00425 579 aaKnown RBP eCLIP20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 PPP1R11O60927 126 aaPredicted RBP20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 HSP90AA1P07900 732 aaKnown RBP20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 C1QTNF8P60827 252 aa20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 ANKRD23Q86SG2 305 aa20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 RNF26Q9BY78 433 aaPredicted RBP20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 SMC3Q9UQE7 1217 aa20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 PCNTO95613 3336 aa20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 SPDYE16A6NNV3 312 aaPredicted RBP20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 PEX10O60683 326 aa20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 TAL1P17542 331 aaPredicted RBP20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 ADAMTS5Q9UNA0 930 aa20.19■□□□□ 0.82
AFG3L1P-204ENST00000421164 VWA5AO00534 786 aa20.18■□□□□ 0.82
AFG3L1P-204ENST00000421164 CYP2C8P10632 490 aa20.18■□□□□ 0.82
AFG3L1P-204ENST00000421164 VEGFBP49765 207 aa20.18■□□□□ 0.82
AFG3L1P-204ENST00000421164 CDC37Q16543 378 aaPredicted RBP20.18■□□□□ 0.82
AFG3L1P-204ENST00000421164 QRICH1Q2TAL8 776 aa20.18■□□□□ 0.82
AFG3L1P-204ENST00000421164 SHISA4Q96DD7 197 aa20.18■□□□□ 0.82
AFG3L1P-204ENST00000421164 RRP36Q96EU6 259 aaKnown RBP20.18■□□□□ 0.82
AFG3L1P-204ENST00000421164 RANBP17Q9H2T7 1088 aaKnown RBP20.18■□□□□ 0.82
AFG3L1P-204ENST00000421164 GJB4Q9NTQ9 266 aa20.18■□□□□ 0.82
AFG3L1P-204ENST00000421164 RLFQ13129 1914 aa20.17■□□□□ 0.82
AFG3L1P-204ENST00000421164 IRX3P78415 501 aaPredicted RBP20.17■□□□□ 0.82
AFG3L1P-204ENST00000421164 TRIM22Q8IYM9 498 aa20.17■□□□□ 0.82
AFG3L1P-204ENST00000421164 SLC38A10Q9HBR0 1119 aa20.17■□□□□ 0.82
AFG3L1P-204ENST00000421164 HOXC10Q9NYD6 342 aa20.17■□□□□ 0.82
AFG3L1P-204ENST00000421164 STK36Q9NRP7 1315 aa20.17■□□□□ 0.82
AFG3L1P-204ENST00000421164 PNMA6FA0A0J9YX94 578 aa20.16■□□□□ 0.82
AFG3L1P-204ENST00000421164 ZBTB5O15062 677 aa20.16■□□□□ 0.82
AFG3L1P-204ENST00000421164 HERVK_113P62684 666 aa20.16■□□□□ 0.82
AFG3L1P-204ENST00000421164 NOGQ13253 232 aa20.16■□□□□ 0.82
AFG3L1P-204ENST00000421164 PFKFB3Q16875 520 aaPredicted RBP20.16■□□□□ 0.82
AFG3L1P-204ENST00000421164 CCDC174Q6PII3 467 aa20.16■□□□□ 0.82
AFG3L1P-204ENST00000421164 IFNL1Q8IU54 200 aa20.16■□□□□ 0.82
AFG3L1P-204ENST00000421164 REPS2Q8NFH8 660 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms