RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TSPY8P0CW00 308 aa20.66■□□□□ 0.9
MSH6-203ENST00000420813 PPARAQ07869 468 aa20.66■□□□□ 0.9
MSH6-203ENST00000420813 SNX17Q15036 470 aa20.66■□□□□ 0.9
MSH6-203ENST00000420813 LRRC41Q15345 812 aa20.66■□□□□ 0.9
MSH6-203ENST00000420813 FAM47AQ5JRC9 791 aa20.66■□□□□ 0.9
MSH6-203ENST00000420813 SLC39A5Q6ZMH5 540 aa20.66■□□□□ 0.9
MSH6-203ENST00000420813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.66■□□□□ 0.9
MSH6-203ENST00000420813 FEM1BQ9UK73 627 aa20.66■□□□□ 0.9
MSH6-203ENST00000420813 ZBED4O75132 1171 aa20.65■□□□□ 0.9
MSH6-203ENST00000420813 RARBP10826 455 aa20.65■□□□□ 0.9
MSH6-203ENST00000420813 MDM2Q00987 491 aaPredicted RBP20.65■□□□□ 0.9
MSH6-203ENST00000420813 LBHD1Q9BQE6 289 aaPredicted RBP20.65■□□□□ 0.9
MSH6-203ENST00000420813 SLC38A10Q9HBR0 1119 aa20.65■□□□□ 0.9
MSH6-203ENST00000420813 PRKAG2Q9UGJ0 569 aa20.65■□□□□ 0.9
MSH6-203ENST00000420813 SYNGAP1Q96PV0 1343 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 DNAJC25-GNG10A0A024R161 153 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 FDX1P10109 184 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 AKR1A1P14550 325 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 OAZ1P54368 228 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 PPP4R3BQ5MIZ7 849 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 C1orf53Q5VUE5 145 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 LRRC47Q8N1G4 583 aaKnown RBP20.64■□□□□ 0.89
MSH6-203ENST00000420813 DDX11Q96FC9 970 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 XPNPEP3Q9NQH7 507 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 CNPY2Q9Y2B0 182 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 RIPK3Q9Y572 518 aa20.64■□□□□ 0.89
MSH6-203ENST00000420813 CTDP1Q9Y5B0 961 aaPredicted RBP20.64■□□□□ 0.89
MSH6-203ENST00000420813 ZNF865P0CJ78 1059 aaPredicted RBP20.63■□□□□ 0.89
MSH6-203ENST00000420813 BMP3P12645 472 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 ADCYAP1R1P41586 468 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 TFAP4Q01664 338 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 HDAC1Q13547 482 aaPredicted RBP20.63■□□□□ 0.89
MSH6-203ENST00000420813 ANKRD45Q5TZF3 282 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 SLFN13Q68D06 897 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 MAMDC4Q6UXC1 1216 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 ZNF467Q7Z7K2 595 aaPredicted RBP20.63■□□□□ 0.89
MSH6-203ENST00000420813 CPXCR1Q8N123 301 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 KIFC2Q96AC6 838 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 EVI5LQ96CN4 794 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 CRBNQ96SW2 442 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 FBXO40Q9UH90 709 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 PHF24Q9UPV7 400 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 ATP11BQ9Y2G3 1177 aa20.63■□□□□ 0.89
MSH6-203ENST00000420813 FOXP2O15409 715 aa20.62■□□□□ 0.89
MSH6-203ENST00000420813 MYCNP04198 464 aaPredicted RBP20.62■□□□□ 0.89
MSH6-203ENST00000420813 TAL1P17542 331 aaPredicted RBP20.62■□□□□ 0.89
MSH6-203ENST00000420813 RNF180Q86T96 592 aa20.62■□□□□ 0.89
MSH6-203ENST00000420813 TICAM2Q86XR7 235 aa20.62■□□□□ 0.89
MSH6-203ENST00000420813 CHST13Q8NET6 341 aa20.62■□□□□ 0.89
MSH6-203ENST00000420813 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.62■□□□□ 0.89
MSH6-203ENST00000420813 GMCL1Q96IK5 515 aa20.61■□□□□ 0.89
MSH6-203ENST00000420813 RAVER2Q9HCJ3 691 aaKnown RBP20.61■□□□□ 0.89
MSH6-203ENST00000420813 STAT2P52630 851 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 PDE1AP54750 535 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 AAMPQ13685 434 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 TRIM60Q495X7 471 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 CCDC129Q6ZRS4 1044 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 FAM160B2Q86V87 743 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 CHURC1Q8WUH1 139 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 FERMT2Q96AC1 680 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 HELLSQ9NRZ9 838 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 ANAPC4Q9UJX5 808 aa20.6■□□□□ 0.89
MSH6-203ENST00000420813 COL6A3P12111 3177 aa20.59■□□□□ 0.89
MSH6-203ENST00000420813 TSPY2A6NKD2 308 aa20.59■□□□□ 0.89
MSH6-203ENST00000420813 PLA2G6O60733 806 aa20.59■□□□□ 0.89
MSH6-203ENST00000420813 ADAMTS4O75173 837 aa20.59■□□□□ 0.89
MSH6-203ENST00000420813 PGK1P00558 417 aa20.59■□□□□ 0.89
MSH6-203ENST00000420813 ANKRD35Q8N283 1001 aa20.59■□□□□ 0.89
MSH6-203ENST00000420813 FAM184BQ9ULE4 1060 aa20.59■□□□□ 0.89
MSH6-203ENST00000420813 TMEM232C9JQI7 657 aa20.58■□□□□ 0.89
MSH6-203ENST00000420813 SNAI1O95863 264 aaPredicted RBP20.58■□□□□ 0.89
MSH6-203ENST00000420813 SLC1A4P43007 532 aa20.58■□□□□ 0.89
MSH6-203ENST00000420813 SLC4A3P48751 1232 aa20.58■□□□□ 0.89
MSH6-203ENST00000420813 ALX1Q15699 326 aa20.58■□□□□ 0.89
MSH6-203ENST00000420813 DEFB123Q8N688 67 aa20.58■□□□□ 0.89
MSH6-203ENST00000420813 STAG1Q8WVM7 1258 aa20.58■□□□□ 0.89
MSH6-203ENST00000420813 TSEN34Q9BSV6 310 aaKnown RBP20.58■□□□□ 0.89
MSH6-203ENST00000420813 PDLIM7Q9NR12 457 aa20.58■□□□□ 0.89
MSH6-203ENST00000420813 STX8Q9UNK0 236 aa20.58■□□□□ 0.89
MSH6-203ENST00000420813 ORC4O43929 436 aa20.57■□□□□ 0.88
MSH6-203ENST00000420813 NOVP48745 357 aa20.57■□□□□ 0.88
MSH6-203ENST00000420813 CTDSPL2Q05D32 466 aa20.57■□□□□ 0.88
MSH6-203ENST00000420813 VPS53Q5VIR6 699 aa20.57■□□□□ 0.88
MSH6-203ENST00000420813 ABHD16BQ9H3Z7 469 aa20.57■□□□□ 0.88
MSH6-203ENST00000420813 PRDM5Q9NQX1 630 aaPredicted RBP20.57■□□□□ 0.88
MSH6-203ENST00000420813 SYNRGQ9UMZ2 1314 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 LAMA2P24043 3122 aaKnown RBP20.56■□□□□ 0.88
MSH6-203ENST00000420813 A0A1W2PQ45 241 aaPredicted RBP20.56■□□□□ 0.88
MSH6-203ENST00000420813 A0A1W2PQY0 241 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 DUSP11O75319 330 aaKnown RBP20.56■□□□□ 0.88
MSH6-203ENST00000420813 FGRP09769 529 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 MCCP23508 829 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 TLE2Q04725 743 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 ACVR2BQ13705 512 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 TKFCQ3LXA3 575 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 LENG1Q96BZ8 264 aaPredicted RBP20.56■□□□□ 0.88
MSH6-203ENST00000420813 FGD4Q96M96 766 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 ACAD9Q9H845 621 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 IL17RBQ9NRM6 502 aa20.56■□□□□ 0.88
MSH6-203ENST00000420813 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms