RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 NR6A1Q15406 480 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 ALX1Q15699 326 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 C12orf60Q5U649 245 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 RNF20Q5VTR2 975 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 METTL16Q86W50 562 aaKnown RBP7.97□□□□□ -1.13
LINC02539-202ENST00000419220 CCDC82Q8N4S0 544 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 SNIP1Q8TAD8 396 aaKnown RBP7.97□□□□□ -1.13
LINC02539-202ENST00000419220 SDR42E1Q8WUS8 393 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 WNK4Q96J92 1243 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
LINC02539-202ENST00000419220 CNNM2Q9H8M5 875 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 ARHGEF10LQ9HCE6 1279 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 PRM3Q9NNZ6 103 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 ZCCHC17Q9NP64 241 aaKnown RBP7.97□□□□□ -1.13
LINC02539-202ENST00000419220 SAGE1Q9NXZ1 904 aa7.97□□□□□ -1.13
LINC02539-202ENST00000419220 MYH8P13535 1937 aa7.96□□□□□ -1.13
LINC02539-202ENST00000419220 POM121CA8CG34 1229 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 GSG1L2A8MUP6 293 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 CDC45O75419 566 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 REC8O95072 547 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 FMNL1O95466 1100 aaPredicted RBP7.96□□□□□ -1.14
LINC02539-202ENST00000419220 TSPY3P0CV98 308 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 TSPY8P0CW00 308 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 TM4SF4P48230 202 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 FMR1Q06787 632 aaKnown RBP eCLIP7.96□□□□□ -1.14
LINC02539-202ENST00000419220 NMIQ13287 307 aaPredicted RBP7.96□□□□□ -1.14
LINC02539-202ENST00000419220 RAB3GAP1Q15042 981 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 TATDN1Q6P1N9 297 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 CTR9Q6PD62 1173 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 MFSD6Q6ZSS7 791 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 TMEM179Q6ZVK1 233 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 RASAL3Q86YV0 1011 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 ZFPM1Q8IX07 1006 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 ZNF280CQ8ND82 737 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 GTF3C2Q8WUA4 911 aaPredicted RBP7.96□□□□□ -1.14
LINC02539-202ENST00000419220 ZKSCAN4Q969J2 545 aaPredicted RBP7.96□□□□□ -1.14
LINC02539-202ENST00000419220 THAP11Q96EK4 314 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 FEZ1Q99689 392 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 DSCC1Q9BVC3 393 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 KANSL2Q9H9L4 492 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 TOMM22Q9NS69 142 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 FCF1Q9Y324 198 aaKnown RBP7.96□□□□□ -1.14
LINC02539-202ENST00000419220 ZHX2Q9Y6X8 837 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 ZMYM6O95789 1325 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 NAV1Q8NEY1 1877 aa7.96□□□□□ -1.14
LINC02539-202ENST00000419220 TSPY2A6NKD2 308 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 USP17L10C9JJH3 530 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 M0R2C6 588 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 ZBTB24O43167 697 aaPredicted RBP7.95□□□□□ -1.14
LINC02539-202ENST00000419220 HSPD1P10809 573 aaKnown RBP7.95□□□□□ -1.14
LINC02539-202ENST00000419220 SMPD1P17405 629 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 PTPRAP18433 802 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 MCCP23508 829 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 CDK8P49336 464 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 CTCFP49711 727 aaPredicted RBP7.95□□□□□ -1.14
LINC02539-202ENST00000419220 KIF23Q02241 960 aaPredicted RBP7.95□□□□□ -1.14
LINC02539-202ENST00000419220 IRF5Q13568 498 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 KIF22Q14807 665 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 SART3Q15020 963 aaKnown RBP7.95□□□□□ -1.14
LINC02539-202ENST00000419220 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.95□□□□□ -1.14
LINC02539-202ENST00000419220 C16orf86Q6ZW13 317 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 IQCA1Q86XH1 822 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 DNAJC5GQ8N7S2 189 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 JMYQ8N9B5 988 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 ESR2Q92731 530 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 KRT23Q9C075 422 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 ZFYVE28Q9HCC9 887 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 PRDM9Q9NQV7 894 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 CDK5RAP2Q96SN8 1893 aa7.95□□□□□ -1.14
LINC02539-202ENST00000419220 CCL15-CCL14A0A0B4J2E2 113 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 ERICH2A1L162 156 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 PHF20L1A8MW92 1017 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 WNT7AO00755 349 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 PRKAB2O43741 272 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 GPR37L1O60883 481 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 ZKSCAN1P17029 563 aaPredicted RBP7.94□□□□□ -1.14
LINC02539-202ENST00000419220 CHMLP26374 656 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 INPP5BP32019 993 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 PLCD1P51178 756 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 PPARAQ07869 468 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 CCL15Q16663 113 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 USP17L2Q6R6M4 530 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 DLK2Q6UY11 383 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 MOB2Q70IA6 237 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 SH3BP5LQ7L8J4 393 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 CCAR1Q8IX12 1150 aaKnown RBP7.94□□□□□ -1.14
LINC02539-202ENST00000419220 FAM227BQ96M60 508 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 PARK7Q99497 189 aaKnown RBP7.94□□□□□ -1.14
LINC02539-202ENST00000419220 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 ANAPC4Q9UJX5 808 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 SYNPO2Q9UMS6 1093 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 SLC45A1Q9Y2W3 748 aa7.94□□□□□ -1.14
LINC02539-202ENST00000419220 CTDP1Q9Y5B0 961 aaPredicted RBP7.94□□□□□ -1.14
LINC02539-202ENST00000419220 A0A0D9SFI3 127 aa7.93□□□□□ -1.14
LINC02539-202ENST00000419220 TRIM75PA6NK02 468 aa7.93□□□□□ -1.14
LINC02539-202ENST00000419220 EPB41L2O43491 1005 aaKnown RBP7.93□□□□□ -1.14
LINC02539-202ENST00000419220 RANBP6O60518 1105 aaKnown RBP7.93□□□□□ -1.14
LINC02539-202ENST00000419220 GH2P01242 217 aa7.93□□□□□ -1.14
LINC02539-202ENST00000419220 FGAP02671 866 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms