RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SPDYE6P0CI01 402 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 GOLGA8HP0CJ92 632 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 LONP1P36776 959 aaKnown RBP10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 PRPHP41219 470 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 MMP14P50281 582 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 NAPAP54920 295 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 PNOCQ13519 176 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 NCAPHQ15003 741 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 POSTNQ15063 836 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 ZRSR1Q15695 479 aaKnown RBP10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 ZNF174Q15697 407 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 E2F4Q16254 413 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 CT47A1Q5JQC4 288 aaPredicted RBP10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 TMEM179Q6ZVK1 233 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 LRRC47Q8N1G4 583 aaKnown RBP10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 AOPEPQ8N6M6 819 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 AGBL3Q8NEM8 1001 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 DCAF4Q8WV16 495 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 ERCC4Q92889 916 aaPredicted RBP10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 ZBED3Q96IU2 234 aaPredicted RBP10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 PIGSQ96S52 555 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 KANSL2Q9H9L4 492 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 C6orf50Q9HD87 102 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 SERTAD1Q9UHV2 236 aa10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.32□□□□□ -0.76
LINCMD1-201ENST00000418518 A0A087WWV3 80 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 A0A087X0B3 334 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 PNMA6FA0A0J9YX94 578 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 CCDC194A0A1B0GVG4 234 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 SMTNL1A8MU46 457 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 BECN2A8MW95 431 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 GOLGA6L6A8MZA4 724 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 PSMD14O00487 310 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 PTMAP06454 111 aaKnown RBP10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 ATP2B1P20020 1258 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 MSNP26038 577 aaKnown RBP10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 IL17AQ16552 155 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 CERKLQ49MI3 558 aaPredicted RBP10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 SPECC1Q5M775 1068 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 USP49Q70CQ1 688 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 CLEC10AQ8IUN9 316 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 GMCL1P1Q8NEA9 526 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 PIBF1Q8WXW3 757 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 SYMPKQ92797 1274 aaKnown RBP10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 CCDC34Q96HJ3 373 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 PRMT6Q96LA8 375 aaPredicted RBP10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 CPVLQ9H3G5 476 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 CLIP2Q9UDT6 1046 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 HERC5Q9UII4 1024 aaKnown RBP10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 PCDHA5Q9Y5H7 936 aa10.31□□□□□ -0.76
LINCMD1-201ENST00000418518 CNTNAP1P78357 1384 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 SMCO2A6NFE2 343 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 RBM5P52756 815 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 CACNB3P54284 484 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 MORC3Q14149 939 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 NONOQ15233 471 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 SIAH1Q8IUQ4 282 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 LARGE2Q8N3Y3 721 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 RASGRP4Q8TDF6 673 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 FAM151AQ8WW52 585 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 EPSTI1Q96J88 318 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 TRIM5Q9C035 493 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 MTFR1LQ9H019 292 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 TDRD3Q9H7E2 651 aaKnown RBP10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 JMJD4Q9H9V9 463 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 TMOD2Q9NZR1 351 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 MAN1B1Q9UKM7 699 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 HDAC9Q9UKV0 1011 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 ZNRF3Q9ULT6 936 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 LTBP3Q9NS15 1303 aa10.3□□□□□ -0.76
LINCMD1-201ENST00000418518 RBBP6Q7Z6E9 1792 aaKnown RBP10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 PARP14Q460N5 1801 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 VWA3AA6NCI4 1184 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 FOXN1O15353 648 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 EEF2P13639 858 aaKnown RBP10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 BMP6P22004 513 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 MCM7P33993 719 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 CLK2P49760 499 aaKnown RBP10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 MYL5Q02045 173 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 TCP10Q12799 353 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 DPYDQ12882 1025 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 SEMA3FQ13275 785 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 INF2Q27J81 1249 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 PDXDC2PQ6P474 469 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 FAM83AQ86UY5 434 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 HOMER1Q86YM7 354 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 TEX2Q8IWB9 1127 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 ADGRF4Q8IZF3 695 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 REXO1Q8N1G1 1221 aaKnown RBP10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 MLKLQ8NB16 471 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 SMARCE1Q969G3 411 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 GMCL1Q96IK5 515 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 AK8Q96MA6 479 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 CCSER1Q9C0I3 900 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 UBA5Q9GZZ9 404 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 GLT8D2Q9H1C3 349 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 HSD3B7Q9H2F3 369 aa10.29□□□□□ -0.76
LINCMD1-201ENST00000418518 KCNF1Q9H3M0 494 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms