RNA–Protein interactions for RNA: ENST00000417857.1

TRIOBP-207, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 5

Gene TRIOBP, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-207ENST00000417857 A0A0G2JLL6 359 aaPredicted RBP20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 PTPDC1A2A3K4 754 aa20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 MPHOSPH10O00566 681 aaKnown RBP20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 TOP1P11387 765 aaKnown RBP20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 AKR1B1P15121 316 aa20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 KIF5BP33176 963 aa20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 RAB3GAP1Q15042 981 aa20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 LARP1BQ659C4 914 aaKnown RBP20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 RCSD1Q6JBY9 416 aa20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 PRRT2Q7Z6L0 340 aaPredicted RBP20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 CTCFLQ8NI51 663 aaPredicted RBP20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 MYL10Q9BUA6 226 aa20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 CABP5Q9NP86 173 aa20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 NR2E3Q9Y5X4 410 aa20.2■□□□□ 0.82
TRIOBP-207ENST00000417857 GADL1Q6ZQY3 521 aa20.19■□□□□ 0.82
TRIOBP-207ENST00000417857 TMEM179Q6ZVK1 233 aa20.19■□□□□ 0.82
TRIOBP-207ENST00000417857 RAB11FIP4Q86YS3 637 aa20.19■□□□□ 0.82
TRIOBP-207ENST00000417857 PNMA1Q8ND90 353 aa20.19■□□□□ 0.82
TRIOBP-207ENST00000417857 CEP95Q96GE4 821 aa20.19■□□□□ 0.82
TRIOBP-207ENST00000417857 DNAJC18Q9H819 358 aa20.19■□□□□ 0.82
TRIOBP-207ENST00000417857 MTMR4Q9NYA4 1195 aa20.19■□□□□ 0.82
TRIOBP-207ENST00000417857 MYH8P13535 1937 aa20.19■□□□□ 0.82
TRIOBP-207ENST00000417857 STX6O43752 255 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 CTDNEP1O95476 244 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 TTLL1O95922 423 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 CAPN2P17655 700 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 RXRAP19793 462 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 ADD1P35611 737 aaKnown RBP20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 NOVP48745 357 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 GNAQP50148 359 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 TROAPQ12815 778 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 ABCB5Q2M3G0 1257 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 UBE2Q1Q7Z7E8 422 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 CCDC144CPQ8IYA2 1237 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 TRIM22Q8IYM9 498 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 U2AF1L4Q8WU68 220 aaKnown RBP20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 DDX11Q96FC9 970 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 TMEM47Q9BQJ4 181 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 KANSL2Q9H9L4 492 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 SZT2Q5T011 3432 aa20.18■□□□□ 0.82
TRIOBP-207ENST00000417857 IGKV6D-41A0A0C4DH26 115 aa20.17■□□□□ 0.82
TRIOBP-207ENST00000417857 JAK2O60674 1132 aa20.17■□□□□ 0.82
TRIOBP-207ENST00000417857 SYT1P21579 422 aa20.17■□□□□ 0.82
TRIOBP-207ENST00000417857 CDC27P30260 824 aa20.17■□□□□ 0.82
TRIOBP-207ENST00000417857 SSRP1Q08945 709 aaKnown RBP20.17■□□□□ 0.82
TRIOBP-207ENST00000417857 SMCR8Q8TEV9 937 aaPredicted RBP20.17■□□□□ 0.82
TRIOBP-207ENST00000417857 WASF1Q92558 559 aa20.17■□□□□ 0.82
TRIOBP-207ENST00000417857 ORC3Q9UBD5 711 aaPredicted RBP20.17■□□□□ 0.82
TRIOBP-207ENST00000417857 FAM196BA6NMK8 535 aa20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 ADCY3O60266 1144 aa20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 FARP2O94887 1054 aaPredicted RBP20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 BRD1O95696 1058 aa20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 IFNAR1P17181 557 aa20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 AKAP17AQ02040 695 aaKnown RBP20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 UNC93B1Q9H1C4 597 aa20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 FAM217BQ9NTX9 383 aaPredicted RBP20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 RBM27Q9P2N5 1060 aaKnown RBP20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 GABRQQ9UN88 632 aa20.16■□□□□ 0.82
TRIOBP-207ENST00000417857 H3BQV1 296 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 TNPO2O14787 897 aaKnown RBP20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 SGPL1O95470 568 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 FLT3LGP49771 235 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 RGS22Q8NE09 1264 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 PXYLP1Q8TE99 480 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 GBP4Q96PP9 640 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 NYAP2Q9P242 653 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 ATP6V1DQ9Y5K8 247 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 STK36Q9NRP7 1315 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 SIPA1L1O43166 1804 aa20.15■□□□□ 0.82
TRIOBP-207ENST00000417857 NTRK3Q16288 839 aa20.14■□□□□ 0.81
TRIOBP-207ENST00000417857 LZTS2Q9BRK4 669 aa20.14■□□□□ 0.81
TRIOBP-207ENST00000417857 CLIP2Q9UDT6 1046 aa20.14■□□□□ 0.81
TRIOBP-207ENST00000417857 VPS37CA5D8V6 355 aaPredicted RBP20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 TRIM75PA6NK02 468 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 INHAP05111 366 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 ZSCAN22P10073 491 aaPredicted RBP20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 IRF5Q13568 498 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 GRM4Q14833 912 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 PROCA1Q8NCQ7 364 aaPredicted RBP20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 TNPO1Q92973 898 aaKnown RBP20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 COA7Q96BR5 231 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 SLC26A6Q9BXS9 759 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 GINM1Q9NU53 330 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 PNMA3Q9UL41 463 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 AGTPBP1Q9UPW5 1226 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 DOCK1Q14185 1865 aa20.13■□□□□ 0.81
TRIOBP-207ENST00000417857 TFRCP02786 760 aaKnown RBP20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 PARP1P09874 1014 aaKnown RBP20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 ELNP15502 786 aa20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 CAP2P40123 477 aa20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 ATP2B2Q01814 1243 aa20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 ICA1Q05084 483 aa20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 PKP1Q13835 747 aa20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 TMTC3Q6ZXV5 915 aa20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 MKL1Q969V6 931 aa20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 RNF26Q9BY78 433 aaPredicted RBP20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 SYNPO2Q9UMS6 1093 aa20.12■□□□□ 0.81
TRIOBP-207ENST00000417857 GDF11O95390 407 aa20.11■□□□□ 0.81
TRIOBP-207ENST00000417857 DEXIO95424 95 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms