RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 TEX13BQ9BXU2 312 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SPC25Q9HBM1 224 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 TBX21Q9UL17 535 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ZNF214Q9UL59 606 aaPredicted RBP9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SYNGAP1Q96PV0 1343 aa9.46□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MBD4O95243 580 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SNAI1O95863 264 aaPredicted RBP9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RLBP1P12271 317 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 COL9A1P20849 921 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ADD2P35612 726 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CDK7P50613 346 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 TMEM240Q5SV17 173 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 FAM83BQ5T0W9 1011 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 AKNAD1Q5T1N1 836 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CCSAPQ6IQ19 270 aaPredicted RBP9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ZNF467Q7Z7K2 595 aaPredicted RBP9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PRPF38AQ8NAV1 312 aaKnown RBP9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 USP38Q8NB14 1042 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 REPS2Q8NFH8 660 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PPM1EQ8WY54 764 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 LENG1Q96BZ8 264 aaPredicted RBP9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 KIF1BPQ96EK5 621 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SLF1Q9BQI6 1058 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PAG1Q9NWQ8 432 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ZHX1Q9UKY1 873 aaPredicted RBP9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SYNRGQ9UMZ2 1314 aa9.45□□□□□ -0.9
HLA-DPA1-241ENST00000417724 VCANP13611 3396 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 DNAJC25-GNG10A0A024R161 153 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CYP2D7A0A087X1C5 515 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ARVCFO00192 962 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 APBB1O00213 710 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 TLR3O15455 904 aaKnown RBP9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ZBED4O75132 1171 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ASGR1P07306 291 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 C6orf222P0C671 652 aaPredicted RBP9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CSF2RAP15509 400 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CST5P28325 142 aaPredicted RBP9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ACVR2BQ13705 512 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 GNASQ5JWF2 1037 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RASIP1Q5U651 963 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SNRNP48Q6IEG0 339 aaKnown RBP9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 C16orf59Q7L2K0 433 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ASB2Q96Q27 587 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PBX4Q9BYU1 374 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ABHD16BQ9H3Z7 469 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MSRAQ9UJ68 235 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CTDP1Q9Y5B0 961 aaPredicted RBP9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 EYSQ5T1H1 3165 aa9.44□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MCM3APO60318 1980 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 A0A0U1RQG5 324 aaPredicted RBP9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 GRXCR1A8MXD5 290 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 F5H6K3 240 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SMIM22K7EJ46 135 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ATP2A1O14983 1001 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 HMMRO75330 724 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ATP5JP18859 108 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PBX2P40425 430 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SLC4A3P48751 1232 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MRPS5P82675 430 aaKnown RBP9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 KLRC3Q07444 240 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 UBE3CQ15386 1083 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RAB30Q15771 203 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CCDC144BQ3MJ40 725 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ZSCAN25Q6NSZ9 544 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CTR9Q6PD62 1173 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PSRC1Q6PGN9 363 aaPredicted RBP9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ZNF365Q70YC5 407 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RPAP2Q8IXW5 612 aaPredicted RBP9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CPXCR1Q8N123 301 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ANKRD35Q8N283 1001 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 IL27Q8NEV9 243 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 UPF3AQ9H1J1 476 aaKnown RBP9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MTIF3Q9H2K0 278 aaKnown RBP9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 BOLA2Q9H3K6 86 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PRDM12Q9H4Q4 367 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 NYAP2Q9P242 653 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 THEGQ9P2T0 379 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 FBXO40Q9UH90 709 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RIPK3Q9Y572 518 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SLC4A4Q9Y6R1 1079 aa9.43□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MYADML2A6NDP7 307 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 RAB11FIP3O75154 756 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 FGBP02675 491 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 ACRP10323 421 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 IGFBP4P22692 258 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 GJA9P57773 515 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 FAM126BQ8IXS8 530 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 CHST13Q8NET6 341 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 NUP88Q99567 741 aaPredicted RBP9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 HAUS7Q99871 368 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 PPP1R12CQ9BZL4 782 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 TSPYL2Q9H2G4 693 aaPredicted RBP9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 SLC28A3Q9HAS3 691 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 MKNK2Q9HBH9 465 aa9.42□□□□□ -0.9
HLA-DPA1-241ENST00000417724 IL23AQ9NPF7 189 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms