RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 BLOC1S2Q6QNY1 142 aa20.49■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 RASGRP2Q7LDG7 609 aa20.49■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 CATIPQ7Z7H3 387 aa20.49■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 KIFC2Q96AC6 838 aa20.49■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 ARHGAP39Q9C0H5 1083 aa20.49■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 SENP2Q9HC62 589 aa20.49■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 ZSWIM6Q9HCJ5 1215 aa20.49■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 ZNF214Q9UL59 606 aaPredicted RBP20.49■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 PEX10O60683 326 aa20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 DDAH1O94760 285 aa20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 FMNL1O95466 1100 aaPredicted RBP20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 SLC25A27O95847 323 aa20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 PARP1P09874 1014 aaKnown RBP20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 COPB2P35606 906 aa20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 COL13A1Q5TAT6 717 aaPredicted RBP20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 RIOX2Q8IUF8 465 aa20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 MOV10L1Q9BXT6 1211 aaKnown RBP20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 AGXT2Q9BYV1 514 aa20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 PRR12Q9ULL5 1215 aa20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 MTMR7Q9Y216 660 aa20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 TRIM17Q9Y577 477 aa20.48■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 PALM3A6NDB9 673 aaPredicted RBP20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 RPS6KB1P23443 525 aa20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 STAT3P40763 770 aa20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 GRM4Q14833 912 aa20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 SYDE2Q5VT97 1194 aa20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 TTBK2Q6IQ55 1244 aa20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 RUFY3Q7L099 469 aa20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 PORCNQ9H237 461 aa20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 MROH8Q9H579 483 aa20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 GPHNQ9NQX3 736 aaPredicted RBP20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 SRRDQ9UH36 339 aa20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 FRMPD2Q68DX3 1309 aaPredicted RBP20.47■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 CCDC69A6NI79 296 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 TNPO2O14787 897 aaKnown RBP20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 CALM1P0DP23 149 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 CALM2P0DP24 149 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 CALM3P0DP25 149 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 CASTP20810 708 aaKnown RBP20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 IKQ13123 557 aaPredicted RBP20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 ZNF654Q8IZM8 581 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 COA7Q96BR5 231 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 TEX13BQ9BXU2 312 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 RANBP17Q9H2T7 1088 aaKnown RBP20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 GPCPD1Q9NPB8 672 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 MAD2L2Q9UI95 211 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 PNMA2Q9UL42 364 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 PTPN22Q9Y2R2 807 aa20.46■□□□□ 0.87
COMMD3-BMI1-201ENST00000417470 STRNO43815 780 aa20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 RCAN1P53805 252 aa20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 FBXO46Q6PJ61 603 aaPredicted RBP20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 PLEKHH3Q7Z736 793 aa20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 CCAR1Q8IX12 1150 aaKnown RBP20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 LRRC2Q9BYS8 371 aa20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 GJD2Q9UKL4 321 aa20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 ISY1Q9ULR0 285 aaKnown RBP20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 CTDP1Q9Y5B0 961 aaPredicted RBP20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 CYP46A1Q9Y6A2 500 aa20.45■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 GOLGA8HP0CJ92 632 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 ERCC3P19447 782 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 SMARCA1P28370 1054 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 SLC16A2P36021 539 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 IRF5Q13568 498 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 SAMD1Q6SPF0 538 aaPredicted RBP20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 NFXL1Q6ZNB6 911 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 GPR142Q7Z601 462 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 ABRAQ8N0Z2 381 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 CHMP4CQ96CF2 233 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 SLC12A7Q9Y666 1083 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 ZNF536O15090 1300 aa20.44■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 KLRF2D3W0D1 207 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 CPA1P15085 419 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 KIF5BP33176 963 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 EVCP57679 992 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 PLS1Q14651 629 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 TKFCQ3LXA3 575 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 MORN1Q5T089 497 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 SYNE3Q6ZMZ3 975 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 Q6ZUG5 572 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 STAG2Q8N3U4 1231 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 SOCS4Q8WXH5 440 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 USP6NLQ92738 828 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 TCEANC2Q96MN5 208 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 MCOLN1Q9GZU1 580 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 ALDH8A1Q9H2A2 487 aaPredicted RBP20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 MGAMO43451 1857 aa20.43■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 SLC15A5A6NIM6 579 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 ICAM1P05362 532 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 PTPREP23469 700 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 GNAQP50148 359 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 PPP2R5BQ15173 497 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 SNRNP48Q6IEG0 339 aaKnown RBP20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 APOA5Q6Q788 366 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 ADGRF4Q8IZF3 695 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 CHST13Q8NET6 341 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 CTCFLQ8NI51 663 aaPredicted RBP20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 MTMR8Q96EF0 704 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 NUDT12Q9BQG2 462 aa20.42■□□□□ 0.86
COMMD3-BMI1-201ENST00000417470 LZTS2Q9BRK4 669 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms