RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 PRAMEF19Q5SWL8 479 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 GJC2Q5T442 439 aaPredicted RBP8.37□□□□□ -1.07
COPS3-202ENST00000417352 MAP3K21Q5TCX8 1036 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 C20orf194Q5TEA3 1177 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 NPLOC4Q8TAT6 608 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.37□□□□□ -1.07
COPS3-202ENST00000417352 CHMP4CQ96CF2 233 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 GPATCH3Q96I76 525 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 C12orf42Q96LP6 360 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 HAUS7Q99871 368 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 MOV10L1Q9BXT6 1211 aaKnown RBP8.37□□□□□ -1.07
COPS3-202ENST00000417352 SPATC1LQ9H0A9 340 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 GOPCQ9HD26 462 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 PRDM5Q9NQX1 630 aaPredicted RBP8.37□□□□□ -1.07
COPS3-202ENST00000417352 ATP8A2Q9NTI2 1148 aa8.37□□□□□ -1.07
COPS3-202ENST00000417352 DDX20Q9UHI6 824 aaKnown RBP8.37□□□□□ -1.07
COPS3-202ENST00000417352 KBTBD13C9JR72 458 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 STRNO43815 780 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 FCER1AP12319 257 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 EEF2P13639 858 aaKnown RBP8.36□□□□□ -1.07
COPS3-202ENST00000417352 KIAA1755Q5JYT7 1200 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 TSHZ3Q63HK5 1081 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 DEFB123Q8N688 67 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 ARRDC4Q8NCT1 418 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 USP6NLQ92738 828 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 FERMT2Q96AC1 680 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 ATG4CQ96DT6 458 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 ATP11BQ9Y2G3 1177 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 PCDHGA10Q9Y5H3 936 aa8.36□□□□□ -1.07
COPS3-202ENST00000417352 PFASO15067 1338 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 PPP1R3GB7ZBB8 358 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 SMIM22K7EJ46 135 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 MSCO60682 206 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 PGK2P07205 417 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 TDO2P48775 406 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 GABPAQ06546 454 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 GRB14Q14449 540 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 KCTD2Q14681 263 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 C12orf60Q5U649 245 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 CTR9Q6PD62 1173 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 LBX2Q6XYB7 198 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 Q7L0L9 218 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 TDHQ8IZJ6 230 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 ZNF444Q8N0Y2 327 aaPredicted RBP8.35□□□□□ -1.07
COPS3-202ENST00000417352 MB21D1Q8N884 522 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 LPAR1Q92633 364 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 CCDC17Q96LX7 622 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 MMP19Q99542 508 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 PUS7LQ9H0K6 701 aaKnown RBP8.35□□□□□ -1.07
COPS3-202ENST00000417352 MROH8Q9H579 483 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 VCPKMTQ9H867 229 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 KANSL2Q9H9L4 492 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 ECHDC1Q9NTX5 307 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 MYH7P12883 1935 aa8.35□□□□□ -1.07
COPS3-202ENST00000417352 A0A1W2PPC1 479 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 WDR46O15213 610 aaKnown RBP8.34□□□□□ -1.07
COPS3-202ENST00000417352 COBLO75128 1261 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 UBE3CQ15386 1083 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 FAM83BQ5T0W9 1011 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 CPXCR1Q8N123 301 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 TRPV1Q8NER1 839 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 FAM161BQ96MY7 647 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 NUP88Q99567 741 aaPredicted RBP8.34□□□□□ -1.07
COPS3-202ENST00000417352 GDF15Q99988 308 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 FBXO28Q9NVF7 368 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 CLIP2Q9UDT6 1046 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 TMX2Q9Y320 296 aa8.34□□□□□ -1.07
COPS3-202ENST00000417352 ZNFX1Q9P2E3 1918 aaKnown RBP8.34□□□□□ -1.07
COPS3-202ENST00000417352 DNM1LO00429 736 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 RNF113AO15541 343 aaKnown RBP8.33□□□□□ -1.08
COPS3-202ENST00000417352 PRDM1O75626 825 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 SLC25A27O95847 323 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 BMP8BP34820 402 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 STAT3P40763 770 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 ADCYAP1R1P41586 468 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 RTP1P59025 263 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 IKQ13123 557 aaPredicted RBP8.33□□□□□ -1.08
COPS3-202ENST00000417352 TMEM132BQ14DG7 1078 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 C16orf86Q6ZW13 317 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 SIAH1Q8IUQ4 282 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 SHCBP1Q8NEM2 672 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 PRO3102Q9H379 93 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 ARPP21Q9UBL0 812 aaPredicted RBP8.33□□□□□ -1.08
COPS3-202ENST00000417352 RABGEF1Q9UJ41 708 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 MTMR7Q9Y216 660 aa8.33□□□□□ -1.08
COPS3-202ENST00000417352 COL11A1P12107 1806 aaPredicted RBP8.33□□□□□ -1.08
COPS3-202ENST00000417352 VWA5AO00534 786 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 DLL1O00548 723 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 SEPT4O43236 478 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 ZBED4O75132 1171 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 RGS20O76081 388 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 PGK1P00558 417 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 SLC3A2P08195 630 aaKnown RBP8.32□□□□□ -1.08
COPS3-202ENST00000417352 HOXC6P09630 235 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 RARBP10826 455 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 COL6A1P12109 1028 aa8.32□□□□□ -1.08
COPS3-202ENST00000417352 CYBAP13498 195 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms