RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 SPRED3Q2MJR0 410 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 MSS51Q4VC12 460 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 MSL1Q68DK7 614 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 KCTD16Q68DU8 428 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 CCDC70Q6NSX1 233 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 SPATA21Q7Z572 469 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 NCAPG2Q86XI2 1143 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 CLASRPQ8N2M8 674 aaKnown RBP7.14□□□□□ -1.27
CCNT1-202ENST00000417344 B4GALNT2Q8NHY0 566 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 CCHCR1Q8TD31 782 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 CPLX3Q8WVH0 158 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 RUBCNQ92622 972 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 CCDC51Q96ER9 411 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 CYFIP2Q96F07 1278 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 PSMD1Q99460 953 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 PAPOLBQ9NRJ5 636 aaKnown RBP7.14□□□□□ -1.27
CCNT1-202ENST00000417344 RGL1Q9NZL6 768 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 HDAC6Q9UBN7 1215 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 BAIAP2L1Q9UHR4 511 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 TBC1D2BQ9UPU7 963 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 SALL1Q9NSC2 1324 aa7.14□□□□□ -1.27
CCNT1-202ENST00000417344 JCADQ9P266 1359 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 MED23Q9ULK4 1368 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 SPDYE3A6NKU9 549 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 E7EVH7 732 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 SRGAP2O75044 1071 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 DNAJC8O75937 253 aaPredicted RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 ANP32DO95626 131 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 ATP1A1P05023 1023 aaKnown RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 LINGO3P0C6S8 592 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 CSB-PGBD3P0DP91 1061 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 FERP16591 822 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 MDH1P40925 334 aaKnown RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 GCLCP48506 637 aaPredicted RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 ELF3P78545 371 aaPredicted RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 LACTB2Q53H82 288 aaPredicted RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 TJAP1Q5JTD0 557 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 HHATQ5VTY9 493 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 PAPD7Q5XG87 772 aaKnown RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 IQCEQ6IPM2 695 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 TMTC1Q8IUR5 882 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 CNGA4Q8IV77 575 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 EHBP1Q8NDI1 1231 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 CAGE1Q8TC20 777 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 ENOX1Q8TC92 643 aaKnown RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 CAPZA3Q96KX2 299 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 ALS2CR12Q96Q35 445 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 MIS18AQ9NYP9 233 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 WWC3Q9ULE0 1092 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 AGLP35573 1532 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 DLG5Q8TDM6 1919 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 PPFIA3O75145 1194 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 POLR3DP05423 398 aaPredicted RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 NR1D1P20393 614 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 BMP6P22004 513 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 CDC25CP30307 473 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 CASP14P31944 242 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 RANBP1P43487 201 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 EPHB4P54760 987 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 COPS2P61201 443 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 APBA1Q02410 837 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 FMR1Q06787 632 aaKnown RBP eCLIP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 BLMHQ13867 455 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 USPL1Q5W0Q7 1092 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 EMBQ6PCB8 327 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 TSEN2Q8NCE0 465 aaKnown RBP7.13□□□□□ -1.27
CCNT1-202ENST00000417344 PRR7Q8TB68 274 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 PIK3R5Q8WYR1 880 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 P3H4Q92791 437 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 ZNF570Q96NI8 536 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 TSC22D3Q99576 134 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 DACH1Q9UI36 760 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 HPSEQ9Y251 543 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 PCDHA5Q9Y5H7 936 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 MYH15Q9Y2K3 1946 aa7.13□□□□□ -1.27
CCNT1-202ENST00000417344 ARHGEF28Q8N1W1 1705 aaKnown RBP7.12□□□□□ -1.27
CCNT1-202ENST00000417344 CARMIL3Q8ND23 1372 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 A6NHS1 94 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 TEX33O43247 280 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 ITGBL1O95965 494 aaPredicted RBP7.12□□□□□ -1.27
CCNT1-202ENST00000417344 ADH1BP00325 375 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 KRT14P02533 472 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 GHRP10912 638 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 ERVK-24P63145 666 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 C2orf54Q08AI8 447 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 MMRN1Q13201 1228 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 ANO1Q5XXA6 986 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 RNF19BQ6ZMZ0 732 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 SYNE3Q6ZMZ3 975 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 ARHGAP22Q7Z5H3 698 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 ZNF589Q86UQ0 364 aaPredicted RBP7.12□□□□□ -1.27
CCNT1-202ENST00000417344 METTL16Q86W50 562 aaKnown RBP7.12□□□□□ -1.27
CCNT1-202ENST00000417344 FOXP4Q8IVH2 680 aaPredicted RBP7.12□□□□□ -1.27
CCNT1-202ENST00000417344 RBM12BQ8IXT5 1001 aaKnown RBP7.12□□□□□ -1.27
CCNT1-202ENST00000417344 FAM81AQ8TBF8 368 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 CAVIN3Q969G5 261 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 JAKMIP2Q96AA8 810 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 ZIM3Q96PE6 472 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 SPSB2Q99619 263 aa7.12□□□□□ -1.27
CCNT1-202ENST00000417344 LRRC2Q9BYS8 371 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms