RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 CELA3AP09093 270 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 LMNB1P20700 586 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 DAB2P98082 770 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 PSMD2Q13200 908 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 CCDC85BQ15834 202 aaPredicted RBP6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 AOC3Q16853 763 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 ZNF648Q5T619 568 aaPredicted RBP6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 PI4K2BQ8TCG2 481 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 GRIN3AQ8TCU5 1115 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 GIPC2Q8TF65 315 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 ISL2Q96A47 359 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 LRRC59Q96AG4 307 aaKnown RBP6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 CDK19Q9BWU1 502 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 RNF19AQ9NV58 838 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 PARP2Q9UGN5 583 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 ADAMTS6Q9UKP5 1117 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 LRP6O75581 1613 aa6.68□□□□□ -1.34
ATG4AP1-201ENST00000416893 TMEM265A0A087WTH1 108 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 RBM47A0AV96 593 aaKnown RBP6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 TTBK2Q6IQ55 1244 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 TMC4Q7Z404 712 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 TOP6BLQ8N6T0 577 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 LRRN4CLQ8ND94 238 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 PMFBP1Q8TBY8 1022 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 FAM168AQ92567 244 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 PCDHA4Q9UN74 947 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 PLAGL2Q9UPG8 496 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 SPATA31A6Q5VVP1 1343 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 SBNO2Q9Y2G9 1366 aa6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 TRPM3Q9HCF6 1732 aaPredicted RBP6.67□□□□□ -1.34
ATG4AP1-201ENST00000416893 COL22A1Q8NFW1 1626 aaPredicted RBP6.66□□□□□ -1.34
ATG4AP1-201ENST00000416893 FANCGO15287 622 aa6.66□□□□□ -1.34
ATG4AP1-201ENST00000416893 RLBP1P12271 317 aa6.66□□□□□ -1.34
ATG4AP1-201ENST00000416893 ZNF16P17020 682 aaPredicted RBP6.66□□□□□ -1.34
ATG4AP1-201ENST00000416893 RPS26P62854 115 aaKnown RBP6.66□□□□□ -1.34
ATG4AP1-201ENST00000416893 EVC2Q86UK5 1308 aa6.66□□□□□ -1.34
ATG4AP1-201ENST00000416893 USP47Q96K76 1375 aa6.66□□□□□ -1.34
ATG4AP1-201ENST00000416893 TNS3Q68CZ2 1445 aa6.66□□□□□ -1.34
ATG4AP1-201ENST00000416893 FARP2O94887 1054 aaPredicted RBP6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 ITIH2P19823 946 aa6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 ANGEL2Q5VTE6 544 aaKnown RBP6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 MPRIPQ6WCQ1 1025 aa6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 KRT28Q7Z3Y7 464 aa6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 KCT2Q8NC54 265 aa6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 NGDNQ8NEJ9 315 aaKnown RBP6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 TMEM40Q8WWA1 233 aa6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 ELMO3Q96BJ8 720 aa6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 TNKS2Q9H2K2 1166 aa6.65□□□□□ -1.34
ATG4AP1-201ENST00000416893 SPATA31A3Q5VYP0 1347 aa6.65□□□□□ -1.35
ATG4AP1-201ENST00000416893 SBNO1A3KN83 1393 aa6.65□□□□□ -1.35
ATG4AP1-201ENST00000416893 ALS2Q96Q42 1657 aa6.65□□□□□ -1.35
ATG4AP1-201ENST00000416893 ST20-MTHFSA0A0A6YYL1 179 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 ST13P50502 369 aaKnown RBP6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 ZNF124Q15973 351 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 PPM1JQ5JR12 505 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 MEX3CQ5U5Q3 659 aaKnown RBP6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 RASIP1Q5U651 963 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 DIEXFQ68CQ4 756 aaKnown RBP6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 CDC37L1Q7L3B6 337 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 HDXQ7Z353 690 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 HEXIM2Q96MH2 286 aaKnown RBP6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 TESK2Q96S53 571 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 MRS2Q9HD23 443 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 SNX11Q9Y5W9 270 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 ACEP12821 1306 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 POLR3AO14802 1390 aaPredicted RBP6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 ARHGEF10O15013 1369 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 PPIP5K1Q6PFW1 1433 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 ABCA3Q99758 1704 aa6.64□□□□□ -1.35
ATG4AP1-201ENST00000416893 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 RING1Q06587 406 aa6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 ZBTB37Q5TC79 503 aa6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 SLC23A3Q6PIS1 610 aa6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 FAM214BQ7L5A3 538 aa6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 C12orf40Q86WS4 652 aa6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 FAM161BQ96MY7 647 aa6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 NOC4LQ9BVI4 516 aaKnown RBP6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 RGS17Q9UGC6 210 aaPredicted RBP6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 GTF2IRD1Q9UHL9 959 aa6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 MARF1Q9Y4F3 1742 aaKnown RBP6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 CSADQ9Y600 493 aa6.63□□□□□ -1.35
ATG4AP1-201ENST00000416893 AKAP12Q02952 1782 aa6.62□□□□□ -1.35
ATG4AP1-201ENST00000416893 DBX1A6NMT0 343 aa6.62□□□□□ -1.35
ATG4AP1-201ENST00000416893 SORBS3O60504 671 aa6.62□□□□□ -1.35
ATG4AP1-201ENST00000416893 MRPL58Q14197 206 aaKnown RBP6.62□□□□□ -1.35
ATG4AP1-201ENST00000416893 TAF1CQ15572 869 aaPredicted RBP6.62□□□□□ -1.35
ATG4AP1-201ENST00000416893 ASB11Q8WXH4 323 aa6.62□□□□□ -1.35
ATG4AP1-201ENST00000416893 CRELD1Q96HD1 420 aa6.62□□□□□ -1.35
ATG4AP1-201ENST00000416893 SNCAIPQ9Y6H5 919 aa6.62□□□□□ -1.35
ATG4AP1-201ENST00000416893 CRYBG1Q9Y4K1 1723 aa6.62□□□□□ -1.35
ATG4AP1-201ENST00000416893 USP6P35125 1406 aa6.61□□□□□ -1.35
ATG4AP1-201ENST00000416893 AFF2P51816 1311 aa6.61□□□□□ -1.35
ATG4AP1-201ENST00000416893 IGF2BP3O00425 579 aaKnown RBP eCLIP6.61□□□□□ -1.35
ATG4AP1-201ENST00000416893 CTSHP09668 335 aa6.61□□□□□ -1.35
ATG4AP1-201ENST00000416893 NTF4P34130 210 aa6.61□□□□□ -1.35
ATG4AP1-201ENST00000416893 LIG3P49916 1009 aa6.61□□□□□ -1.35
ATG4AP1-201ENST00000416893 PKN1Q16512 942 aa6.61□□□□□ -1.35
ATG4AP1-201ENST00000416893 MEI1Q5TIA1 1274 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms