RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PGK1P00558 417 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
PAF1-202ENST00000416728 TAL1P17542 331 aaPredicted RBP17.19■□□□□ 0.34
PAF1-202ENST00000416728 SLC4A3P48751 1232 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 PDE4BQ07343 736 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 C1orf53Q5VUE5 145 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 LRRC47Q8N1G4 583 aaKnown RBP17.19■□□□□ 0.34
PAF1-202ENST00000416728 MSL3Q8N5Y2 521 aaKnown RBP17.19■□□□□ 0.34
PAF1-202ENST00000416728 MKL1Q969V6 931 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 KIFC2Q96AC6 838 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 SEC62Q99442 399 aaKnown RBP17.19■□□□□ 0.34
PAF1-202ENST00000416728 NAPBQ9H115 298 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 MTMR10Q9NXD2 777 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 PHF24Q9UPV7 400 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 RIPK3Q9Y572 518 aa17.19■□□□□ 0.34
PAF1-202ENST00000416728 GREB1LQ9C091 1923 aaPredicted RBP17.19■□□□□ 0.34
PAF1-202ENST00000416728 ZNF865P0CJ78 1059 aaPredicted RBP17.18■□□□□ 0.34
PAF1-202ENST00000416728 TSPY3P0CV98 308 aa17.18■□□□□ 0.34
PAF1-202ENST00000416728 TSPY8P0CW00 308 aa17.18■□□□□ 0.34
PAF1-202ENST00000416728 GMCL1P1Q8NEA9 526 aa17.18■□□□□ 0.34
PAF1-202ENST00000416728 OTUD7AQ8TE49 926 aaPredicted RBP17.18■□□□□ 0.34
PAF1-202ENST00000416728 PDLIM7Q9NR12 457 aa17.18■□□□□ 0.34
PAF1-202ENST00000416728 FEM1BQ9UK73 627 aa17.18■□□□□ 0.34
PAF1-202ENST00000416728 STXBP5LQ9Y2K9 1186 aa17.18■□□□□ 0.34
PAF1-202ENST00000416728 SYNGAP1Q96PV0 1343 aa17.18■□□□□ 0.34
PAF1-202ENST00000416728 COL11A1P12107 1806 aaPredicted RBP17.17■□□□□ 0.34
PAF1-202ENST00000416728 MX1P20591 662 aa17.17■□□□□ 0.34
PAF1-202ENST00000416728 ZMYM1Q5SVZ6 1142 aa17.17■□□□□ 0.34
PAF1-202ENST00000416728 NEDD1Q8NHV4 660 aa17.17■□□□□ 0.34
PAF1-202ENST00000416728 SLC38A10Q9HBR0 1119 aa17.17■□□□□ 0.34
PAF1-202ENST00000416728 RAVER2Q9HCJ3 691 aaKnown RBP17.17■□□□□ 0.34
PAF1-202ENST00000416728 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
PAF1-202ENST00000416728 PLIN4Q96Q06 1357 aa17.17■□□□□ 0.34
PAF1-202ENST00000416728 DNAJC25-GNG10A0A024R161 153 aa17.16■□□□□ 0.34
PAF1-202ENST00000416728 TLE2Q04725 743 aa17.16■□□□□ 0.34
PAF1-202ENST00000416728 PPARAQ07869 468 aa17.16■□□□□ 0.34
PAF1-202ENST00000416728 SLFN13Q68D06 897 aa17.16■□□□□ 0.34
PAF1-202ENST00000416728 MAMDC4Q6UXC1 1216 aa17.16■□□□□ 0.34
PAF1-202ENST00000416728 BADQ92934 168 aa17.16■□□□□ 0.34
PAF1-202ENST00000416728 LENG1Q96BZ8 264 aaPredicted RBP17.16■□□□□ 0.34
PAF1-202ENST00000416728 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
PAF1-202ENST00000416728 FBXO40Q9UH90 709 aa17.16■□□□□ 0.34
PAF1-202ENST00000416728 ZHX1Q9UKY1 873 aaPredicted RBP17.16■□□□□ 0.34
PAF1-202ENST00000416728 FAM184BQ9ULE4 1060 aa17.16■□□□□ 0.34
PAF1-202ENST00000416728 A0A1W2PQ45 241 aaPredicted RBP17.15■□□□□ 0.34
PAF1-202ENST00000416728 A0A1W2PQY0 241 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 BMP3P12645 472 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 OAZ1P54368 228 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 TFAP4Q01664 338 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 ZNF467Q7Z7K2 595 aaPredicted RBP17.15■□□□□ 0.34
PAF1-202ENST00000416728 ANKRD35Q8N283 1001 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 CHST13Q8NET6 341 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 TACC3Q9Y6A5 838 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 TRIM43BA6NCK2 446 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 ADAMTS4O75173 837 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 SNAI1O95863 264 aaPredicted RBP17.15■□□□□ 0.34
PAF1-202ENST00000416728 FDX1P10109 184 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 SHHQ15465 462 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 PPP4R3BQ5MIZ7 849 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 FAM109BQ6ICB4 259 aaPredicted RBP17.15■□□□□ 0.34
PAF1-202ENST00000416728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.15■□□□□ 0.34
PAF1-202ENST00000416728 SH3RF1Q7Z6J0 888 aa17.15■□□□□ 0.34
PAF1-202ENST00000416728 TRIM43Q96BQ3 446 aaPredicted RBP17.15■□□□□ 0.34
PAF1-202ENST00000416728 TSEN34Q9BSV6 310 aaKnown RBP17.15■□□□□ 0.34
PAF1-202ENST00000416728 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
PAF1-202ENST00000416728 TMEM232C9JQI7 657 aa17.14■□□□□ 0.33
PAF1-202ENST00000416728 POTEB2H3BUK9 544 aa17.14■□□□□ 0.33
PAF1-202ENST00000416728 CLTBP09497 229 aa17.14■□□□□ 0.33
PAF1-202ENST00000416728 STAT2P52630 851 aa17.14■□□□□ 0.33
PAF1-202ENST00000416728 IKQ13123 557 aaPredicted RBP17.14■□□□□ 0.33
PAF1-202ENST00000416728 C9orf50Q5SZB4 431 aa17.14■□□□□ 0.33
PAF1-202ENST00000416728 HOMER2Q9NSB8 354 aa17.14■□□□□ 0.33
PAF1-202ENST00000416728 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.14■□□□□ 0.33
PAF1-202ENST00000416728 MOXD2PA6NHM9 499 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 PQBP1O60828 265 aaKnown RBP17.13■□□□□ 0.33
PAF1-202ENST00000416728 DUSP11O75319 330 aaKnown RBP17.13■□□□□ 0.33
PAF1-202ENST00000416728 SLC1A4P43007 532 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 ACLYP53396 1101 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
PAF1-202ENST00000416728 ACVR2BQ13705 512 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 CCDC129Q6ZRS4 1044 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 FAM160B2Q86V87 743 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 CHURC1Q8WUH1 139 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 NUP133Q8WUM0 1156 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 GMCL1Q96IK5 515 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 STARD7Q9NQZ5 370 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 STX8Q9UNK0 236 aa17.13■□□□□ 0.33
PAF1-202ENST00000416728 DNAH12Q6ZR08 3092 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 SALL3Q9BXA9 1300 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 LTBP2Q14767 1821 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 DLL1O00548 723 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 ZNF697Q5TEC3 545 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 ANKRD45Q5TZF3 282 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 KLHDC9Q8NEP7 349 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 STAG1Q8WVM7 1258 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 FAM161BQ96MY7 647 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 ABHD16BQ9H3Z7 469 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
PAF1-202ENST00000416728 SPC25Q9HBM1 224 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms