RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 IL1RAPL2Q9NP60 686 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 DCP1AQ9NPI6 582 aaPredicted RBP11.33□□□□□ -0.6
LINC01238-201ENST00000416204 NRBP1Q9UHY1 535 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 MSRAQ9UJ68 235 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 EXOC6BQ9Y2D4 811 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 TMX2Q9Y320 296 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 UMODL1Q5DID0 1318 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 ZNF532Q9HCE3 1301 aa11.33□□□□□ -0.6
LINC01238-201ENST00000416204 ZNF316A6NFI3 1004 aaPredicted RBP11.32□□□□□ -0.6
LINC01238-201ENST00000416204 RFXAPO00287 272 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 GOLIM4O00461 696 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 VWA5AO00534 786 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
LINC01238-201ENST00000416204 ASGR1P07306 291 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 BEX3Q00994 111 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 SKIV2LQ15477 1246 aaKnown RBP11.32□□□□□ -0.6
LINC01238-201ENST00000416204 RASIP1Q5U651 963 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 CCSAPQ6IQ19 270 aaPredicted RBP11.32□□□□□ -0.6
LINC01238-201ENST00000416204 OTOP2Q7RTS6 562 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 CERS3Q8IU89 383 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 TMEM199Q8N511 208 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 GLT1D1Q96MS3 346 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 TSEN34Q9BSV6 310 aaKnown RBP11.32□□□□□ -0.6
LINC01238-201ENST00000416204 FAM184BQ9ULE4 1060 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 RIPK3Q9Y572 518 aa11.32□□□□□ -0.6
LINC01238-201ENST00000416204 COL11A1P12107 1806 aaPredicted RBP11.31□□□□□ -0.6
LINC01238-201ENST00000416204 IPO8O15397 1037 aaKnown RBP11.31□□□□□ -0.6
LINC01238-201ENST00000416204 CCL23P55773 120 aa11.31□□□□□ -0.6
LINC01238-201ENST00000416204 SNRNP48Q6IEG0 339 aaKnown RBP11.31□□□□□ -0.6
LINC01238-201ENST00000416204 REPS2Q8NFH8 660 aa11.31□□□□□ -0.6
LINC01238-201ENST00000416204 DDX11Q96FC9 970 aa11.31□□□□□ -0.6
LINC01238-201ENST00000416204 CERS4Q9HA82 394 aa11.31□□□□□ -0.6
LINC01238-201ENST00000416204 SLC28A3Q9HAS3 691 aa11.31□□□□□ -0.6
LINC01238-201ENST00000416204 ZNF214Q9UL59 606 aaPredicted RBP11.31□□□□□ -0.6
LINC01238-201ENST00000416204 PPP1R9AQ9ULJ8 1098 aa11.31□□□□□ -0.6
LINC01238-201ENST00000416204 DDX49Q9Y6V7 483 aaKnown RBP11.31□□□□□ -0.6
LINC01238-201ENST00000416204 TCF20Q9UGU0 1960 aaKnown RBP11.3□□□□□ -0.6
LINC01238-201ENST00000416204 ROBO3Q96MS0 1386 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 RBAK-RBAKDNI3L0D1 243 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 ARVCFO00192 962 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 MBD4O95243 580 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 CDK8P49336 464 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 CDK7P50613 346 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 ACVR2BQ13705 512 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 GNASQ5JWF2 1037 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 KRT40Q6A162 431 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 PSRC1Q6PGN9 363 aaPredicted RBP11.3□□□□□ -0.6
LINC01238-201ENST00000416204 FAM126BQ8IXS8 530 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 CPXCR1Q8N123 301 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 CHMP4CQ96CF2 233 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 EPHX3Q9H6B9 360 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 SH2D4AQ9H788 454 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 IL23AQ9NPF7 189 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 ADAMTS5Q9UNA0 930 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 NOP58Q9Y2X3 529 aaKnown RBP11.3□□□□□ -0.6
LINC01238-201ENST00000416204 ZNFX1Q9P2E3 1918 aaKnown RBP11.3□□□□□ -0.6
LINC01238-201ENST00000416204 MYO9BQ13459 2157 aa11.3□□□□□ -0.6
LINC01238-201ENST00000416204 A0A0U1RQG5 324 aaPredicted RBP11.29□□□□□ -0.6
LINC01238-201ENST00000416204 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.29□□□□□ -0.6
LINC01238-201ENST00000416204 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 FAM86C2PA6NEL3 165 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 ZBBXA8MT70 800 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 DUSP11O75319 330 aaKnown RBP11.29□□□□□ -0.6
LINC01238-201ENST00000416204 FGBP02675 491 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 BMP1P13497 986 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 RAB30Q15771 203 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 CCDC144BQ3MJ40 725 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 PPP2R2DQ66LE6 453 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 CCDC174Q6PII3 467 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 CXCL17Q6UXB2 119 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 NOL8Q76FK4 1167 aaKnown RBP11.29□□□□□ -0.6
LINC01238-201ENST00000416204 ITPRIPQ8IWB1 547 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 HERVK_113Q902F9 699 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 TRPV6Q9H1D0 765 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 RAVER2Q9HCJ3 691 aaKnown RBP11.29□□□□□ -0.6
LINC01238-201ENST00000416204 HOMER2Q9NSB8 354 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.29□□□□□ -0.6
LINC01238-201ENST00000416204 SWAP70Q9UH65 585 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
LINC01238-201ENST00000416204 TRANK1O15050 2925 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 MROH7Q68CQ1 1323 aa11.29□□□□□ -0.6
LINC01238-201ENST00000416204 PARP14Q460N5 1801 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 USP17L12C9JPN9 530 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 USP17L21D6R901 530 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 TLR3O15455 904 aaKnown RBP11.28□□□□□ -0.6
LINC01238-201ENST00000416204 KIFC2Q96AC6 838 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 SCLYQ96I15 445 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 FGD4Q96M96 766 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 SLF1Q9BQI6 1058 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 HIPK3Q9H422 1215 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 ELP1O95163 1332 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 SYNGAP1Q96PV0 1343 aa11.28□□□□□ -0.6
LINC01238-201ENST00000416204 EPOPA6NHQ4 379 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 CTAGE5O15320 804 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 IGSF3O75054 1194 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 CD4P01730 458 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 RLBP1P12271 317 aa11.27□□□□□ -0.61
LINC01238-201ENST00000416204 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms