RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 RASGRP4Q8TDF6 673 aa8.2□□□□□ -1.1
EPHA4-204ENST00000415749 PLPPR2Q96GM1 343 aa8.2□□□□□ -1.1
EPHA4-204ENST00000415749 METTL14Q9HCE5 456 aaKnown RBP8.2□□□□□ -1.1
EPHA4-204ENST00000415749 UBP1Q9NZI7 540 aa8.2□□□□□ -1.1
EPHA4-204ENST00000415749 CRIM1Q9NZV1 1036 aa8.2□□□□□ -1.1
EPHA4-204ENST00000415749 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
EPHA4-204ENST00000415749 PCDHGC5Q9Y5F6 944 aa8.2□□□□□ -1.1
EPHA4-204ENST00000415749 THSD7AQ9UPZ6 1657 aa8.2□□□□□ -1.1
EPHA4-204ENST00000415749 FMN2Q9NZ56 1722 aa8.2□□□□□ -1.1
EPHA4-204ENST00000415749 RGPD8O14715 1765 aaPredicted RBP8.2□□□□□ -1.1
EPHA4-204ENST00000415749 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
EPHA4-204ENST00000415749 KRBA1A5PL33 1030 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 TLR3O15455 904 aaKnown RBP8.19□□□□□ -1.1
EPHA4-204ENST00000415749 SERINC3Q13530 473 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 NBPF6Q5VWK0 638 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 LRFN4Q6PJG9 635 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.19□□□□□ -1.1
EPHA4-204ENST00000415749 DYMQ7RTS9 669 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 CERS3Q8IU89 383 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 TCP11L2Q8N4U5 519 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 NGDNQ8NEJ9 315 aaKnown RBP8.19□□□□□ -1.1
EPHA4-204ENST00000415749 ZCRB1Q8TBF4 217 aaKnown RBP8.19□□□□□ -1.1
EPHA4-204ENST00000415749 NBPF4Q96M43 638 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 PRAM1Q96QH2 718 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 YIPF2Q9BWQ6 316 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 POGKQ9P215 609 aa8.19□□□□□ -1.1
EPHA4-204ENST00000415749 YTHDC2Q9H6S0 1430 aaKnown RBP8.19□□□□□ -1.1
EPHA4-204ENST00000415749 NUP188Q5SRE5 1749 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 DCDC2CA8MYV0 355 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 ZNF165P49910 485 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 RASSF7Q02833 373 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 PDE4BQ07343 736 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 INPP5AQ14642 412 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 GPR162Q16538 588 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 SEZ6Q53EL9 994 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 CYFIP1Q7L576 1253 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 SLITRK4Q8IW52 837 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 C14orf93Q9H972 538 aaKnown RBP8.18□□□□□ -1.1
EPHA4-204ENST00000415749 PIDD1Q9HB75 910 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 KLHL42Q9P2K6 505 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 PPP1R9AQ9ULJ8 1098 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 KIAA0232Q92628 1395 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 RREB1Q92766 1687 aa8.18□□□□□ -1.1
EPHA4-204ENST00000415749 CHD4Q14839 1912 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 C1QTNF9BB2RNN3 333 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 GFRA2O00451 464 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 FANCGO15287 622 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 DRD2P14416 443 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 CRKP46108 304 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 PREPP48147 710 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 USP11P51784 963 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 FILIP1Q7Z7B0 1213 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 CD163Q86VB7 1156 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 C12orf40Q86WS4 652 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 FBXO27Q8NI29 283 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 MKL1Q969V6 931 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 SEC16BQ96JE7 1060 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 FANCD2OSQ96PS1 177 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 SRPK1Q96SB4 655 aaKnown RBP8.17□□□□□ -1.1
EPHA4-204ENST00000415749 BRINP2Q9C0B6 783 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 ZNF408Q9H9D4 720 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 STK32BQ9NY57 414 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 HIF3AQ9Y2N7 669 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 THRAP3Q9Y2W1 955 aaKnown RBP8.17□□□□□ -1.1
EPHA4-204ENST00000415749 COL4A3BPQ9Y5P4 624 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 CSADQ9Y600 493 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 DHX57Q6P158 1386 aaKnown RBP8.17□□□□□ -1.1
EPHA4-204ENST00000415749 ANKRD30BQ9BXX2 1392 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 ABCA3Q99758 1704 aa8.17□□□□□ -1.1
EPHA4-204ENST00000415749 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.16□□□□□ -1.1
EPHA4-204ENST00000415749 PRAMEF27A3QJZ7 478 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 PPLO60437 1756 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 MCM4P33991 863 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 CHRNA4P43681 627 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 ASPAP45381 313 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 NASPP49321 788 aaPredicted RBP8.16□□□□□ -1.1
EPHA4-204ENST00000415749 PTF1AQ7RTS3 328 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 DZIP1LQ8IYY4 767 aaKnown RBP8.16□□□□□ -1.1
EPHA4-204ENST00000415749 REXO1Q8N1G1 1221 aaKnown RBP8.16□□□□□ -1.1
EPHA4-204ENST00000415749 C2CD4AQ8NCU7 369 aaPredicted RBP8.16□□□□□ -1.1
EPHA4-204ENST00000415749 RNF214Q8ND24 703 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 UTP4Q969X6 686 aaKnown RBP8.16□□□□□ -1.1
EPHA4-204ENST00000415749 FAM46AQ96IP4 442 aaKnown RBP8.16□□□□□ -1.1
EPHA4-204ENST00000415749 MTFR1LQ9H019 292 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 GSX1Q9H4S2 264 aaPredicted RBP8.16□□□□□ -1.1
EPHA4-204ENST00000415749 DISC1Q9NRI5 854 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 IFT57Q9NWB7 429 aa8.16□□□□□ -1.1
EPHA4-204ENST00000415749 NRKQ7Z2Y5 1582 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 ENPP3O14638 875 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 GDF11O95390 407 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 GATA4P43694 442 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 ETF1P62495 437 aaKnown RBP8.15□□□□□ -1.1
EPHA4-204ENST00000415749 SLC15A2Q16348 729 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.15□□□□□ -1.1
EPHA4-204ENST00000415749 ANKS3Q6ZW76 656 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 CDC37L1Q7L3B6 337 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 TMEM151AQ8N4L1 468 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 KCT2Q8NC54 265 aa8.15□□□□□ -1.1
EPHA4-204ENST00000415749 RNPC3Q96LT9 517 aaKnown RBP8.15□□□□□ -1.1
EPHA4-204ENST00000415749 BRMS1Q9HCU9 246 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms