RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 SENP2Q9HC62 589 aa19.26■□□□□ 0.67
LINC00398-201ENST00000414407 ZSWIM6Q9HCJ5 1215 aa19.26■□□□□ 0.67
LINC00398-201ENST00000414407 CCDC69A6NI79 296 aa19.25■□□□□ 0.67
LINC00398-201ENST00000414407 DDAH1O94760 285 aa19.25■□□□□ 0.67
LINC00398-201ENST00000414407 FMNL1O95466 1100 aaPredicted RBP19.25■□□□□ 0.67
LINC00398-201ENST00000414407 PARP1P09874 1014 aaKnown RBP19.25■□□□□ 0.67
LINC00398-201ENST00000414407 CASTP20810 708 aaKnown RBP19.25■□□□□ 0.67
LINC00398-201ENST00000414407 RPS6KB1P23443 525 aa19.25■□□□□ 0.67
LINC00398-201ENST00000414407 HOXD10P28358 340 aa19.25■□□□□ 0.67
LINC00398-201ENST00000414407 PRMT2P55345 433 aa19.25■□□□□ 0.67
LINC00398-201ENST00000414407 TMEM132BQ14DG7 1078 aa19.25■□□□□ 0.67
LINC00398-201ENST00000414407 SAMD1Q6SPF0 538 aaPredicted RBP19.25■□□□□ 0.67
LINC00398-201ENST00000414407 TRIM47Q96LD4 638 aa19.25■□□□□ 0.67
LINC00398-201ENST00000414407 ARHGAP39Q9C0H5 1083 aa19.25■□□□□ 0.67
LINC00398-201ENST00000414407 GPHNQ9NQX3 736 aaPredicted RBP19.25■□□□□ 0.67
LINC00398-201ENST00000414407 ZNF214Q9UL59 606 aaPredicted RBP19.25■□□□□ 0.67
LINC00398-201ENST00000414407 PRR12Q9ULL5 1215 aa19.25■□□□□ 0.67
LINC00398-201ENST00000414407 FRMPD2Q68DX3 1309 aaPredicted RBP19.25■□□□□ 0.67
LINC00398-201ENST00000414407 PEX10O60683 326 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 SLC25A27O95847 323 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 CALM1P0DP23 149 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 CALM2P0DP24 149 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 CALM3P0DP25 149 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 CTGFP29279 349 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 COPB2P35606 906 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 CAP1Q01518 475 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 SYDE2Q5VT97 1194 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 TTBK2Q6IQ55 1244 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 NFXL1Q6ZNB6 911 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 RUFY3Q7L099 469 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 OTOP1Q7RTM1 612 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 ZNF654Q8IZM8 581 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 CHMP4CQ96CF2 233 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 LRRC2Q9BYS8 371 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 GPCPD1Q9NPB8 672 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 TRIM17Q9Y577 477 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 CTDP1Q9Y5B0 961 aaPredicted RBP19.24■□□□□ 0.67
LINC00398-201ENST00000414407 CYP46A1Q9Y6A2 500 aa19.24■□□□□ 0.67
LINC00398-201ENST00000414407 PALM3A6NDB9 673 aaPredicted RBP19.23■□□□□ 0.67
LINC00398-201ENST00000414407 TNPO2O14787 897 aaKnown RBP19.23■□□□□ 0.67
LINC00398-201ENST00000414407 STAT3P40763 770 aa19.23■□□□□ 0.67
LINC00398-201ENST00000414407 GRM4Q14833 912 aa19.23■□□□□ 0.67
LINC00398-201ENST00000414407 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
LINC00398-201ENST00000414407 CCAR1Q8IX12 1150 aaKnown RBP19.23■□□□□ 0.67
LINC00398-201ENST00000414407 COA7Q96BR5 231 aa19.23■□□□□ 0.67
LINC00398-201ENST00000414407 MOV10L1Q9BXT6 1211 aaKnown RBP19.23■□□□□ 0.67
LINC00398-201ENST00000414407 TEX13BQ9BXU2 312 aa19.23■□□□□ 0.67
LINC00398-201ENST00000414407 AGXT2Q9BYV1 514 aa19.23■□□□□ 0.67
LINC00398-201ENST00000414407 PNMA2Q9UL42 364 aa19.23■□□□□ 0.67
LINC00398-201ENST00000414407 SLC12A7Q9Y666 1083 aa19.23■□□□□ 0.67
LINC00398-201ENST00000414407 GOLGA8HP0CJ92 632 aa19.22■□□□□ 0.67
LINC00398-201ENST00000414407 SLC16A2P36021 539 aa19.22■□□□□ 0.67
LINC00398-201ENST00000414407 RCAN1P53805 252 aa19.22■□□□□ 0.67
LINC00398-201ENST00000414407 SYNE3Q6ZMZ3 975 aa19.22■□□□□ 0.67
LINC00398-201ENST00000414407 TCEANC2Q96MN5 208 aa19.22■□□□□ 0.67
LINC00398-201ENST00000414407 PORCNQ9H237 461 aa19.22■□□□□ 0.67
LINC00398-201ENST00000414407 RANBP17Q9H2T7 1088 aaKnown RBP19.22■□□□□ 0.67
LINC00398-201ENST00000414407 MROH8Q9H579 483 aa19.22■□□□□ 0.67
LINC00398-201ENST00000414407 SRRDQ9UH36 339 aa19.22■□□□□ 0.67
LINC00398-201ENST00000414407 MAD2L2Q9UI95 211 aa19.22■□□□□ 0.67
LINC00398-201ENST00000414407 KLRF2D3W0D1 207 aa19.21■□□□□ 0.67
LINC00398-201ENST00000414407 STRNO43815 780 aa19.21■□□□□ 0.67
LINC00398-201ENST00000414407 CPA1P15085 419 aa19.21■□□□□ 0.67
LINC00398-201ENST00000414407 KIF5BP33176 963 aa19.21■□□□□ 0.67
LINC00398-201ENST00000414407 FGD1P98174 961 aa19.21■□□□□ 0.67
LINC00398-201ENST00000414407 PLS1Q14651 629 aa19.21■□□□□ 0.67
LINC00398-201ENST00000414407 COL13A1Q5TAT6 717 aaPredicted RBP19.21■□□□□ 0.67
LINC00398-201ENST00000414407 Q6ZUG5 572 aa19.21■□□□□ 0.67
LINC00398-201ENST00000414407 PLEKHH3Q7Z736 793 aa19.21■□□□□ 0.67
LINC00398-201ENST00000414407 CTCFLQ8NI51 663 aaPredicted RBP19.21■□□□□ 0.67
LINC00398-201ENST00000414407 ERCC3P19447 782 aa19.2■□□□□ 0.66
LINC00398-201ENST00000414407 SMARCA1P28370 1054 aa19.2■□□□□ 0.66
LINC00398-201ENST00000414407 FBXO46Q6PJ61 603 aaPredicted RBP19.2■□□□□ 0.66
LINC00398-201ENST00000414407 APOA5Q6Q788 366 aa19.2■□□□□ 0.66
LINC00398-201ENST00000414407 GPR142Q7Z601 462 aa19.2■□□□□ 0.66
LINC00398-201ENST00000414407 STAG2Q8N3U4 1231 aa19.2■□□□□ 0.66
LINC00398-201ENST00000414407 NUP133Q8WUM0 1156 aa19.2■□□□□ 0.66
LINC00398-201ENST00000414407 PTPN22Q9Y2R2 807 aa19.2■□□□□ 0.66
LINC00398-201ENST00000414407 ZNF536O15090 1300 aa19.2■□□□□ 0.66
LINC00398-201ENST00000414407 GNAQP50148 359 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 EVCP57679 992 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 TKFCQ3LXA3 575 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 SNRNP48Q6IEG0 339 aaKnown RBP19.19■□□□□ 0.66
LINC00398-201ENST00000414407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.19■□□□□ 0.66
LINC00398-201ENST00000414407 ADGRF4Q8IZF3 695 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 ABRAQ8N0Z2 381 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 CPXCR1Q8N123 301 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 SOCS4Q8WXH5 440 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 LZTS2Q9BRK4 669 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 UBA5Q9GZZ9 404 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 ALDH8A1Q9H2A2 487 aaPredicted RBP19.19■□□□□ 0.66
LINC00398-201ENST00000414407 UPF2Q9HAU5 1272 aaKnown RBP19.19■□□□□ 0.66
LINC00398-201ENST00000414407 CWC22Q9HCG8 908 aaKnown RBP19.19■□□□□ 0.66
LINC00398-201ENST00000414407 RAVER2Q9HCJ3 691 aaKnown RBP19.19■□□□□ 0.66
LINC00398-201ENST00000414407 GJD2Q9UKL4 321 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 IVNS1ABPQ9Y6Y0 642 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 MGAMO43451 1857 aa19.19■□□□□ 0.66
LINC00398-201ENST00000414407 SLC15A5A6NIM6 579 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 ICAM1P05362 532 aa19.18■□□□□ 0.66
LINC00398-201ENST00000414407 RBM25P49756 843 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms