RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 AFAP1L1Q8TED9 768 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 ESR2Q92731 530 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 TMEM60Q9H2L4 133 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 MLXIPQ9HAP2 919 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 RWDD2AQ9UIY3 292 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 LUC7L2Q9Y383 392 aaKnown RBP16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 ZC3H4Q9UPT8 1303 aaKnown RBP16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 MAGEB6P1A0A0J9YX57 407 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 USP17L21D6R901 530 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 PRPF6O94906 941 aaKnown RBP16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 ATP2C1P98194 919 aaPredicted RBP16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 TROAPQ12815 778 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 OR8K1Q8NGG5 319 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 IPO4Q8TEX9 1081 aaKnown RBP16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 TRIM47Q96LD4 638 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 LRP6O75581 1613 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 POTEB2H3BUK9 544 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 STAT6P42226 847 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 STIM1Q13586 685 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 CTR9Q6PD62 1173 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 COG1Q8WTW3 980 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 KAT14Q9H8E8 782 aa16.38■□□□□ 0.21
SEMA3F-202ENST00000413852 LMTK3Q96Q04 1460 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 NCK2O43639 380 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 XBP1P17861 261 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 SLC51AQ86UW1 340 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 ZNF384Q8TF68 577 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 MYH2Q9UKX2 1941 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 ALS2Q96Q42 1657 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 CCT5P48643 541 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 SELENOOQ9BVL4 669 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 DMGDHQ9UI17 866 aaKnown RBP16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 SAMM50Q9Y512 469 aa16.37■□□□□ 0.21
SEMA3F-202ENST00000413852 PRPF3O43395 683 aaKnown RBP16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 CYP19A1P11511 503 aaPredicted RBP16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 FECHP22830 423 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 ZNF658Q5TYW1 1059 aaPredicted RBP16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 TYW1BQ6NUM6 668 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 FERMT2Q96AC1 680 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 LRWD1Q9UFC0 647 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 ITIH6Q6UXX5 1313 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 FAM170AA1A519 330 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 LRRC10BA6NIK2 292 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 ZNF263O14978 683 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 GTPBP6O43824 516 aaPredicted RBP16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 IDEP14735 1019 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 KLRK1P26718 216 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 NAALADL2Q58DX5 795 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 CDHR2Q9BYE9 1310 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 TRIM21P19474 475 aaKnown RBP16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 CHRNDQ07001 517 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 STAG2Q8N3U4 1231 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 CCDC24Q8N4L8 307 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 SMARCC1Q92922 1105 aaPredicted RBP16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 CCDC51Q96ER9 411 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 UIMC1Q96RL1 719 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 LRRC1Q9BTT6 524 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 TSPYL1Q9H0U9 437 aa16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 NHEJ1Q9H9Q4 299 aaPredicted RBP16.36■□□□□ 0.21
SEMA3F-202ENST00000413852 CNTNAP5Q8WYK1 1306 aa16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 EPHB6O15197 1021 aa16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 FCER1AP12319 257 aa16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 LIG3P49916 1009 aa16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 TMTC3Q6ZXV5 915 aa16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 SND1Q7KZF4 910 aaKnown RBP eCLIP16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 CAPN6Q9Y6Q1 641 aa16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 IVLP07476 585 aa16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 NKX1-1Q15270 411 aaPredicted RBP16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 TMC4Q7Z404 712 aa16.35■□□□□ 0.21
SEMA3F-202ENST00000413852 MOCS3O95396 460 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 RNASE9P60153 205 aaKnown RBP16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 WDR93Q6P2C0 686 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 C3orf67Q6ZVT6 689 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 TMTC2Q8N394 836 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 GOLGA6L1Q8N7Z2 621 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 RNF41Q9H4P4 317 aaPredicted RBP16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 MROH5Q6ZUA9 1318 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 KCTD16Q68DU8 428 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 NFRKBQ6P4R8 1299 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 ADSSL1Q8N142 457 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 MICALL1Q8N3F8 863 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 ANKRD20A12PQ8NF67 263 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 SLIT2O94813 1529 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 PSMD14O00487 310 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 INF2Q27J81 1249 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 TTC31Q49AM3 519 aaPredicted RBP16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 SH2D3CQ8N5H7 860 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 CRACR2AQ9BSW2 395 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 GBP3Q9H0R5 595 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 BRMS1Q9HCU9 246 aa16.34■□□□□ 0.21
SEMA3F-202ENST00000413852 COL4A1P02462 1669 aa16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 MYH6P13533 1939 aa16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 ZSCAN5CA6NGD5 496 aaPredicted RBP16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 LGALS16A8MUM7 142 aa16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 SEMA3EO15041 775 aa16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 CHD4Q14839 1912 aa16.33■□□□□ 0.21
SEMA3F-202ENST00000413852 CCDC178Q5BJE1 867 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms