RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
LIMS4-201ENST00000413601 ADORA2AP29274 412 aa17.48■□□□□ 0.39
LIMS4-201ENST00000413601 SLC1A4P43007 532 aa17.48■□□□□ 0.39
LIMS4-201ENST00000413601 DPP9Q86TI2 863 aa17.48■□□□□ 0.39
LIMS4-201ENST00000413601 HMX1Q9NP08 348 aaPredicted RBP17.48■□□□□ 0.39
LIMS4-201ENST00000413601 FLRT1Q9NZU1 646 aa17.48■□□□□ 0.39
LIMS4-201ENST00000413601 SMCHD1A6NHR9 2005 aa17.48■□□□□ 0.39
LIMS4-201ENST00000413601 ZBED4O75132 1171 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 HOXC6P09630 235 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 PTH1RQ03431 593 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 CACNB2Q08289 660 aaPredicted RBP17.47■□□□□ 0.39
LIMS4-201ENST00000413601 MAP3K21Q5TCX8 1036 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 RCSD1Q6JBY9 416 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 KCTD1Q719H9 257 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 CPXCR1Q8N123 301 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 ESR2Q92731 530 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 CCDC136Q96JN2 1154 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 TMEM47Q9BQJ4 181 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 CTDP1Q9Y5B0 961 aaPredicted RBP17.47■□□□□ 0.39
LIMS4-201ENST00000413601 PDE4DIPQ5VU43 2346 aa17.47■□□□□ 0.39
LIMS4-201ENST00000413601 B4E1Z4 1266 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 SGSM2O43147 1006 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 COBLO75128 1261 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 KDM4AO75164 1064 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 TFRCP02786 760 aaKnown RBP17.46■□□□□ 0.39
LIMS4-201ENST00000413601 TOP1P11387 765 aaKnown RBP17.46■□□□□ 0.39
LIMS4-201ENST00000413601 FCER1AP12319 257 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 SLC4A3P48751 1232 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 STAT2P52630 851 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 IKQ13123 557 aaPredicted RBP17.46■□□□□ 0.39
LIMS4-201ENST00000413601 SNRNP48Q6IEG0 339 aaKnown RBP17.46■□□□□ 0.39
LIMS4-201ENST00000413601 CHURC1Q8WUH1 139 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 TEX13BQ9BXU2 312 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 SLC38A10Q9HBR0 1119 aa17.46■□□□□ 0.39
LIMS4-201ENST00000413601 RAVER2Q9HCJ3 691 aaKnown RBP17.46■□□□□ 0.39
LIMS4-201ENST00000413601 FAM160B2Q86V87 743 aa17.45■□□□□ 0.38
LIMS4-201ENST00000413601 ABRAQ8N0Z2 381 aa17.45■□□□□ 0.38
LIMS4-201ENST00000413601 TTC14Q96N46 770 aa17.45■□□□□ 0.38
LIMS4-201ENST00000413601 MMP19Q99542 508 aa17.45■□□□□ 0.38
LIMS4-201ENST00000413601 RIPK3Q9Y572 518 aa17.45■□□□□ 0.38
LIMS4-201ENST00000413601 ATP2A1O14983 1001 aa17.44■□□□□ 0.38
LIMS4-201ENST00000413601 CCND3P30281 292 aaPredicted RBP17.44■□□□□ 0.38
LIMS4-201ENST00000413601 COPB2P35606 906 aa17.44■□□□□ 0.38
LIMS4-201ENST00000413601 CCDC96Q2M329 555 aa17.44■□□□□ 0.38
LIMS4-201ENST00000413601 MFSD14CQ5VZR4 134 aa17.44■□□□□ 0.38
LIMS4-201ENST00000413601 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
LIMS4-201ENST00000413601 CRISPLD2Q9H0B8 497 aa17.44■□□□□ 0.38
LIMS4-201ENST00000413601 ZSWIM5Q9P217 1185 aa17.44■□□□□ 0.38
LIMS4-201ENST00000413601 MYH6P13533 1939 aa17.44■□□□□ 0.38
LIMS4-201ENST00000413601 MCM3APO60318 1980 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 PLA2G6O60733 806 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 NEFLP07196 543 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 PGK2P07205 417 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 CYP2C19P33261 490 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 SNAP25P60880 206 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 KCTD2Q14681 263 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 TTBK2Q6IQ55 1244 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 IQCA1Q86XH1 822 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 KRT23Q9C075 422 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 SLC5A4Q9NY91 659 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 PRR12Q9ULL5 1215 aa17.43■□□□□ 0.38
LIMS4-201ENST00000413601 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
LIMS4-201ENST00000413601 FRMPD2Q68DX3 1309 aaPredicted RBP17.43■□□□□ 0.38
LIMS4-201ENST00000413601 MKI67P46013 3256 aaKnown RBP17.42■□□□□ 0.38
LIMS4-201ENST00000413601 FARP2O94887 1054 aaPredicted RBP17.42■□□□□ 0.38
LIMS4-201ENST00000413601 IGHA2P01877 340 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 CYP21A2P08686 494 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 FDX1P10109 184 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 PDHBP11177 359 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 SLC16A2P36021 539 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 NT5C2P49902 561 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 OAZ1P54368 228 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 BMP2KLQ5H9B9 411 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 OLFML2BQ68BL8 750 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 UBE2Q1Q7Z7E8 422 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 DGKHQ86XP1 1220 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 ZSCAN10Q96SZ4 725 aaPredicted RBP17.42■□□□□ 0.38
LIMS4-201ENST00000413601 CNNM2Q9H8M5 875 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 ALPK3Q96L96 1907 aa17.42■□□□□ 0.38
LIMS4-201ENST00000413601 CCDC178Q5BJE1 867 aa17.41■□□□□ 0.38
LIMS4-201ENST00000413601 CCDC174Q6PII3 467 aa17.41■□□□□ 0.38
LIMS4-201ENST00000413601 MAP4K1Q92918 833 aa17.41■□□□□ 0.38
LIMS4-201ENST00000413601 MAML3Q96JK9 1138 aa17.41■□□□□ 0.38
LIMS4-201ENST00000413601 AGBL1Q96MI9 1066 aa17.41■□□□□ 0.38
LIMS4-201ENST00000413601 HOMER2Q9NSB8 354 aa17.41■□□□□ 0.38
LIMS4-201ENST00000413601 TAF6LQ9Y6J9 622 aa17.41■□□□□ 0.38
LIMS4-201ENST00000413601 ZNF536O15090 1300 aa17.41■□□□□ 0.38
LIMS4-201ENST00000413601 CAPN2P17655 700 aa17.4■□□□□ 0.38
LIMS4-201ENST00000413601 CNGA1P29973 690 aa17.4■□□□□ 0.38
LIMS4-201ENST00000413601 ZNF792Q3KQV3 632 aa17.4■□□□□ 0.38
LIMS4-201ENST00000413601 BTNL9Q6UXG8 535 aa17.4■□□□□ 0.38
LIMS4-201ENST00000413601 ENAHQ8N8S7 591 aaPredicted RBP17.4■□□□□ 0.38
LIMS4-201ENST00000413601 TRPV1Q8NER1 839 aa17.4■□□□□ 0.38
LIMS4-201ENST00000413601 DDX11Q96FC9 970 aa17.4■□□□□ 0.38
LIMS4-201ENST00000413601 ESYT1Q9BSJ8 1104 aa17.4■□□□□ 0.38
LIMS4-201ENST00000413601 TNKSO95271 1327 aa17.4■□□□□ 0.38
LIMS4-201ENST00000413601 SNHG28P0DPA3 235 aa17.39■□□□□ 0.37
LIMS4-201ENST00000413601 CYBAP13498 195 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms